RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 TMEM161AQ9NX61 479 aa22.42■■□□□ 1.18
DDX11-220ENST00000542244 EML1O00423 815 aa22.41■■□□□ 1.18
DDX11-220ENST00000542244 DEXIO95424 95 aa22.41■■□□□ 1.18
DDX11-220ENST00000542244 MTERF2Q49AM1 385 aa22.41■■□□□ 1.18
DDX11-220ENST00000542244 CLLU1OSQ5K130 101 aa22.41■■□□□ 1.18
DDX11-220ENST00000542244 MIER3Q7Z3K6 550 aa22.41■■□□□ 1.18
DDX11-220ENST00000542244 TRIM22Q8IYM9 498 aa22.41■■□□□ 1.18
DDX11-220ENST00000542244 DAGLBQ8NCG7 672 aa22.41■■□□□ 1.18
DDX11-220ENST00000542244 OXER1Q8TDS5 423 aa22.41■■□□□ 1.18
DDX11-220ENST00000542244 CD207Q9UJ71 328 aa22.41■■□□□ 1.18
DDX11-220ENST00000542244 CEP131Q9UPN4 1083 aa22.41■■□□□ 1.18
DDX11-220ENST00000542244 NCK2O43639 380 aa22.4■■□□□ 1.18
DDX11-220ENST00000542244 DARSP14868 501 aaKnown RBP22.4■■□□□ 1.18
DDX11-220ENST00000542244 ATF7P17544 494 aaPredicted RBP22.4■■□□□ 1.18
DDX11-220ENST00000542244 EIF4BP23588 611 aaKnown RBP22.4■■□□□ 1.18
DDX11-220ENST00000542244 PLA2G5P39877 138 aa22.4■■□□□ 1.18
DDX11-220ENST00000542244 NDUFV1P49821 464 aa22.4■■□□□ 1.18
DDX11-220ENST00000542244 JAK3P52333 1124 aa22.4■■□□□ 1.18
DDX11-220ENST00000542244 EARS2Q5JPH6 523 aaKnown RBP22.4■■□□□ 1.18
DDX11-220ENST00000542244 ECHDC2Q86YB7 292 aa22.4■■□□□ 1.18
DDX11-220ENST00000542244 EFHBQ8N7U6 833 aa22.4■■□□□ 1.18
DDX11-220ENST00000542244 ZNF579Q8NAF0 562 aaKnown RBP22.4■■□□□ 1.18
DDX11-220ENST00000542244 MAP7D2Q96T17 732 aa22.4■■□□□ 1.18
DDX11-220ENST00000542244 SEPT9Q9UHD8 586 aaPredicted RBP22.4■■□□□ 1.18
DDX11-220ENST00000542244 TPCN1Q9ULQ1 816 aa22.4■■□□□ 1.18
DDX11-220ENST00000542244 FAM205CA6NFA0 338 aa22.39■■□□□ 1.17
DDX11-220ENST00000542244 CPLX1O14810 134 aa22.39■■□□□ 1.17
DDX11-220ENST00000542244 FSCN2O14926 492 aa22.39■■□□□ 1.17
DDX11-220ENST00000542244 CTDNEP1O95476 244 aa22.39■■□□□ 1.17
DDX11-220ENST00000542244 SMAD4Q13485 552 aaKnown RBP22.39■■□□□ 1.17
DDX11-220ENST00000542244 PLA2G4FQ68DD2 849 aa22.39■■□□□ 1.17
DDX11-220ENST00000542244 KSR1Q8IVT5 923 aa22.39■■□□□ 1.17
DDX11-220ENST00000542244 RNF169Q8NCN4 708 aa22.39■■□□□ 1.17
DDX11-220ENST00000542244 ELAC1Q9H777 363 aaKnown RBP22.39■■□□□ 1.17
DDX11-220ENST00000542244 WRAP73Q9P2S5 460 aaPredicted RBP22.39■■□□□ 1.17
DDX11-220ENST00000542244 SFNP31947 248 aa22.38■■□□□ 1.17
DDX11-220ENST00000542244 TBC1D8BQ0IIM8 1120 aa22.38■■□□□ 1.17
DDX11-220ENST00000542244 THNSL1Q8IYQ7 743 aa22.38■■□□□ 1.17
DDX11-220ENST00000542244 MICAL1Q8TDZ2 1067 aa22.38■■□□□ 1.17
DDX11-220ENST00000542244 PHF20Q9BVI0 1012 aa22.38■■□□□ 1.17
DDX11-220ENST00000542244 NIFKQ9BYG3 293 aaKnown RBP22.38■■□□□ 1.17
DDX11-220ENST00000542244 PRKAG3Q9UGI9 489 aa22.38■■□□□ 1.17
DDX11-220ENST00000542244 DDX25Q9UHL0 483 aaKnown RBP22.38■■□□□ 1.17
DDX11-220ENST00000542244 VAV3Q9UKW4 847 aa22.38■■□□□ 1.17
DDX11-220ENST00000542244 PCDHB12Q9Y5F1 795 aa22.38■■□□□ 1.17
DDX11-220ENST00000542244 A0A087WZ62 844 aa22.37■■□□□ 1.17
DDX11-220ENST00000542244 IGKV6-21A0A0C4DH24 114 aa22.37■■□□□ 1.17
DDX11-220ENST00000542244 EPB41L2O43491 1005 aaKnown RBP22.37■■□□□ 1.17
DDX11-220ENST00000542244 EYA4O95677 639 aa22.37■■□□□ 1.17
DDX11-220ENST00000542244 TMOD1P28289 359 aa22.37■■□□□ 1.17
DDX11-220ENST00000542244 NONOQ15233 471 aaKnown RBP eCLIP22.37■■□□□ 1.17
DDX11-220ENST00000542244 LETM2Q2VYF4 491 aa22.37■■□□□ 1.17
DDX11-220ENST00000542244 LONRF3Q496Y0 759 aa22.37■■□□□ 1.17
DDX11-220ENST00000542244 ODR4Q5SWX8 454 aa22.37■■□□□ 1.17
DDX11-220ENST00000542244 ANO5Q75V66 913 aa22.37■■□□□ 1.17
DDX11-220ENST00000542244 ZNF598Q86UK7 904 aaKnown RBP22.37■■□□□ 1.17
DDX11-220ENST00000542244 NLRP7Q8WX94 980 aa22.37■■□□□ 1.17
DDX11-220ENST00000542244 FDXACB1Q9BRP7 624 aaPredicted RBP22.37■■□□□ 1.17
DDX11-220ENST00000542244 TMEM117Q9H0C3 514 aa22.37■■□□□ 1.17
DDX11-220ENST00000542244 TLE6Q9H808 572 aa22.37■■□□□ 1.17
DDX11-220ENST00000542244 TLR9Q9NR96 1032 aa22.37■■□□□ 1.17
DDX11-220ENST00000542244 MUTYHQ9UIF7 546 aa22.37■■□□□ 1.17
DDX11-220ENST00000542244 MEIS3P2A8K0S8 358 aa22.36■■□□□ 1.17
DDX11-220ENST00000542244 DDX11L8A8MPP1 907 aa22.36■■□□□ 1.17
DDX11-220ENST00000542244 HIDE1A8MVS5 230 aa22.36■■□□□ 1.17
DDX11-220ENST00000542244 DCXO43602 365 aa22.36■■□□□ 1.17
DDX11-220ENST00000542244 LARGE1O95461 756 aa22.36■■□□□ 1.17
DDX11-220ENST00000542244 NPEPPSP55786 919 aa22.36■■□□□ 1.17
DDX11-220ENST00000542244 XKR3Q5GH77 459 aa22.36■■□□□ 1.17
DDX11-220ENST00000542244 PLPP4Q5VZY2 271 aa22.36■■□□□ 1.17
DDX11-220ENST00000542244 SMRP1Q8NCR6 262 aa22.36■■□□□ 1.17
DDX11-220ENST00000542244 HELQQ8TDG4 1101 aa22.36■■□□□ 1.17
DDX11-220ENST00000542244 SCLT1Q96NL6 688 aa22.36■■□□□ 1.17
DDX11-220ENST00000542244 CDH22Q9UJ99 828 aa22.36■■□□□ 1.17
DDX11-220ENST00000542244 COASYQ13057 564 aa22.35■■□□□ 1.17
DDX11-220ENST00000542244 DUSP6Q16828 381 aa22.35■■□□□ 1.17
DDX11-220ENST00000542244 KCNT2Q6UVM3 1135 aa22.35■■□□□ 1.17
DDX11-220ENST00000542244 RNF135Q8IUD6 432 aa22.35■■□□□ 1.17
DDX11-220ENST00000542244 HAS1Q92839 578 aa22.35■■□□□ 1.17
DDX11-220ENST00000542244 LPPQ93052 612 aa22.35■■□□□ 1.17
DDX11-220ENST00000542244 FAM122AQ96E09 287 aa22.35■■□□□ 1.17
DDX11-220ENST00000542244 KCNMB3Q9NPA1 279 aa22.35■■□□□ 1.17
DDX11-220ENST00000542244 FAM50BQ9Y247 325 aa22.35■■□□□ 1.17
DDX11-220ENST00000542244 USP15Q9Y4E8 981 aaPredicted RBP22.35■■□□□ 1.17
DDX11-220ENST00000542244 PRR33A8MZF0 331 aa22.34■■□□□ 1.17
DDX11-220ENST00000542244 NT5C1B-RDH14C9J2C7 533 aa22.34■■□□□ 1.17
DDX11-220ENST00000542244 PFKFB2O60825 505 aa22.34■■□□□ 1.17
DDX11-220ENST00000542244 ZSCAN20P17040 1043 aaPredicted RBP22.34■■□□□ 1.17
DDX11-220ENST00000542244 UBE3AQ05086 875 aa22.34■■□□□ 1.17
DDX11-220ENST00000542244 KCNC3Q14003 757 aa22.34■■□□□ 1.17
DDX11-220ENST00000542244 MOXD1Q6UVY6 613 aa22.34■■□□□ 1.17
DDX11-220ENST00000542244 KRT25Q7Z3Z0 450 aa22.34■■□□□ 1.17
DDX11-220ENST00000542244 NECAB1Q8N987 351 aa22.34■■□□□ 1.17
DDX11-220ENST00000542244 RDM1Q8NG50 284 aa22.34■■□□□ 1.17
DDX11-220ENST00000542244 MRPS27Q92552 414 aaKnown RBP22.34■■□□□ 1.17
DDX11-220ENST00000542244 APOL5Q9BWW9 433 aa22.34■■□□□ 1.17
DDX11-220ENST00000542244 AAASQ9NRG9 546 aa22.34■■□□□ 1.17
DDX11-220ENST00000542244 SUCLA2Q9P2R7 463 aaPredicted RBP22.34■■□□□ 1.17
DDX11-220ENST00000542244 A0A0U1RQF3 1178 aa22.33■■□□□ 1.17
DDX11-220ENST00000542244 ZBTB39O15060 712 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms