RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ATF7IPQ6VMQ6 1270 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 ZNF804AQ7Z570 1209 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 COPS5Q92905 334 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 GPR101Q96P66 508 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-220ENST00000541963 BICC1Q9H694 974 aaKnown RBP6.6□□□□□ -1.35
CPSF7-220ENST00000541963 GPRC5CQ9NQ84 441 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 MAGEC2Q9UBF1 373 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-220ENST00000541963 BLACEA4D250 179 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 RBAK-RBAKDNI3L0D1 243 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 COBLO75128 1261 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 BCAR3O75815 825 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 MYCLP1P12525 358 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-220ENST00000541963 PLS3P13797 630 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 CNGA1P29973 690 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 LTBRP36941 435 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 MASP1P48740 699 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 IGBP1P78318 339 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 KCNAB2Q13303 367 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 PRSS53Q2L4Q9 553 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 CAVIN4Q5BKX8 364 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 CT47A1Q5JQC4 288 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-220ENST00000541963 METTL24Q5JXM2 366 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 PRSS36Q5K4E3 855 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 SLC35F1Q5T1Q4 408 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 ACBD5Q5T8D3 534 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-220ENST00000541963 RSPO2Q6UXX9 243 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-220ENST00000541963 CYP2R1Q6VVX0 501 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 C15orf52Q6ZUT6 534 aaKnown RBP6.59□□□□□ -1.35
CPSF7-220ENST00000541963 FTSJ3Q8IY81 847 aaKnown RBP6.59□□□□□ -1.35
CPSF7-220ENST00000541963 DIO2Q92813 273 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 DCPSQ96C86 337 aaKnown RBP6.59□□□□□ -1.35
CPSF7-220ENST00000541963 KAZALD1Q96I82 304 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 ZFYVE21Q9BQ24 234 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 MCMBPQ9BTE3 642 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 CD209Q9NNX6 404 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 AP5S1Q9NUS5 200 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 INTS7Q9NVH2 962 aaKnown RBP6.59□□□□□ -1.35
CPSF7-220ENST00000541963 CLEC1BQ9P126 229 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 HDAC9Q9UKV0 1011 aa6.59□□□□□ -1.35
CPSF7-220ENST00000541963 COL4A5P29400 1685 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 DUOX1Q9NRD9 1551 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 MYO1BO43795 1136 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 PDE8BO95263 885 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 TGFB1P01137 390 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 IFIT1P09914 478 aaKnown RBP6.58□□□□□ -1.36
CPSF7-220ENST00000541963 FURINP09958 794 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 HIBADHP31937 336 aaKnown RBP6.58□□□□□ -1.36
CPSF7-220ENST00000541963 TRIM61Q5EBN2 209 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 ANGEL2Q5VTE6 544 aaKnown RBP6.58□□□□□ -1.36
CPSF7-220ENST00000541963 HLA-DQA1Q5Y7H0 255 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 MTDHQ86UE4 582 aaKnown RBP6.58□□□□□ -1.36
CPSF7-220ENST00000541963 JAMLQ86YT9 394 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 IFNL3Q8IZI9 196 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 ANKRD44Q8N8A2 993 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 FRS2Q8WU20 508 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 CHAC2Q8WUX2 184 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 PTCHD1Q96NR3 888 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 BRINP2Q9C0B6 783 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 LMCD1Q9NZU5 365 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 PGAP2Q9UHJ9 254 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 SLC5A6Q9Y289 635 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 RIPOR2Q9Y4F9 1068 aa6.58□□□□□ -1.36
CPSF7-220ENST00000541963 SPEF2Q9C093 1822 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 PASKQ96RG2 1323 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 LTBP1Q14766 1721 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 B4E1Z4 1266 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 EYA2O00167 538 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 FGF10O15520 208 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-220ENST00000541963 OPA1O60313 960 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 FRAT2O75474 233 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-220ENST00000541963 CIAO1O76071 339 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 SASH1O94885 1247 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 ESR1P03372 595 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 GNAI2P04899 355 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 TRIM27P14373 513 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 IL1R1P14778 569 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 SOX5P35711 763 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 IL15P40933 162 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-220ENST00000541963 ZNF280AP59817 542 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-220ENST00000541963 FKBP1AP62942 108 aaKnown RBP6.57□□□□□ -1.36
CPSF7-220ENST00000541963 GUCY1A3Q02108 690 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 DUSP4Q13115 394 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 DEFB115Q30KQ5 88 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 TBC1D10BQ4KMP7 808 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-220ENST00000541963 TM4SF20Q53R12 229 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 DACT2Q5SW24 774 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 CNNM4Q6P4Q7 775 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 UBE2R2Q712K3 238 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-220ENST00000541963 AHI1Q8N157 1196 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 DNAJC5GQ8N7S2 189 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 KREMEN2Q8NCW0 462 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 NPLOC4Q8TAT6 608 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 CCDC120Q96HB5 630 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 CLUHP3Q96NS8 147 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 MMP19Q99542 508 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 ALG1Q9BT22 464 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 PHF20Q9BVI0 1012 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 PUS3Q9BZE2 481 aaKnown RBP6.57□□□□□ -1.36
CPSF7-220ENST00000541963 CHMP4BQ9H444 224 aaKnown RBP6.57□□□□□ -1.36
CPSF7-220ENST00000541963 GPR27Q9NS67 375 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms