RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 AFAP1L2Q8N4X5 818 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 OR2W6PQ8NHA6 318 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 CALML6Q8TD86 181 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 ERCC4Q92889 916 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-217ENST00000541578 E2F7Q96AV8 911 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 FAM126AQ9BYI3 521 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-217ENST00000541578 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 MYH16Q9H6N6 1097 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 ACSS2Q9NR19 701 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 CDC42EP3Q9UKI2 254 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 A0A0G2JNJ9 132 aa5.51□□□□□ -1.53
SNHG1-217ENST00000541578 PLIN1O60240 522 aa5.51□□□□□ -1.53
SNHG1-217ENST00000541578 KATNA1O75449 491 aa5.51□□□□□ -1.53
SNHG1-217ENST00000541578 KIF11P52732 1056 aa5.51□□□□□ -1.53
SNHG1-217ENST00000541578 RRADP55042 308 aa5.51□□□□□ -1.53
SNHG1-217ENST00000541578 RAC3P60763 192 aa5.51□□□□□ -1.53
SNHG1-217ENST00000541578 TMPRSS15P98073 1019 aa5.51□□□□□ -1.53
SNHG1-217ENST00000541578 TTF1Q15361 905 aaPredicted RBP5.51□□□□□ -1.53
SNHG1-217ENST00000541578 CDCA2Q69YH5 1023 aaPredicted RBP5.51□□□□□ -1.53
SNHG1-217ENST00000541578 LRRC37BQ96QE4 947 aa5.51□□□□□ -1.53
SNHG1-217ENST00000541578 MEGF9Q9H1U4 602 aa5.51□□□□□ -1.53
SNHG1-217ENST00000541578 PCIF1Q9H4Z3 704 aa5.51□□□□□ -1.53
SNHG1-217ENST00000541578 GABBR1Q9UBS5 961 aa5.51□□□□□ -1.53
SNHG1-217ENST00000541578 Q9UFV3 132 aa5.51□□□□□ -1.53
SNHG1-217ENST00000541578 ST6GALNAC2Q9UJ37 374 aa5.51□□□□□ -1.53
SNHG1-217ENST00000541578 WASHC2CQ9Y4E1 1318 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 H7C1D1 291 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 CBX4O00257 560 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 TPD52L2O43399 206 aaKnown RBP5.5□□□□□ -1.53
SNHG1-217ENST00000541578 CYP17A1P05093 508 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 INSRRP14616 1297 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 ZNF20P17024 532 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 APEX1P27695 318 aaKnown RBP5.5□□□□□ -1.53
SNHG1-217ENST00000541578 FNTBP49356 437 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 IL2P60568 153 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 MOGSQ13724 837 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 ICAM4Q14773 271 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 DHCR24Q15392 516 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 ZNF174Q15697 407 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 ZXDCQ2QGD7 858 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-217ENST00000541578 LCE5AQ5TCM9 118 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 TRIM68Q6AZZ1 485 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 SPATS2Q86XZ4 545 aaKnown RBP5.5□□□□□ -1.53
SNHG1-217ENST00000541578 GIMAP8Q8ND71 665 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-217ENST00000541578 DNERQ8NFT8 737 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 DVL3Q92997 716 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-217ENST00000541578 NEIL1Q96FI4 390 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-217ENST00000541578 C1QTNF3Q9BXJ4 246 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 IFT22Q9H7X7 185 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 B4GALT6Q9UBX8 382 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 NR2E1Q9Y466 385 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 BAZ1BQ9UIG0 1483 aaKnown RBP5.5□□□□□ -1.53
SNHG1-217ENST00000541578 KIF21AQ7Z4S6 1674 aa5.5□□□□□ -1.53
SNHG1-217ENST00000541578 PLEKHD1A6NEE1 506 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 PATE3B3GLJ2 98 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 DVL2O14641 736 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 KIF3BO15066 747 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 GAS7O60861 476 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 ZNF623O75123 536 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 PEX14O75381 377 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 MAP4K4O95819 1239 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-217ENST00000541578 CT47B1P0C2W7 299 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-217ENST00000541578 MEOX1P50221 254 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 TBX4P57082 545 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 ALDH6A1Q02252 535 aaKnown RBP5.49□□□□□ -1.53
SNHG1-217ENST00000541578 MAP3K12Q12852 859 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 NOLC1Q14978 699 aaKnown RBP eCLIP5.49□□□□□ -1.536e-9■■■■■ 29.1
SNHG1-217ENST00000541578 GRAMD4Q6IC98 578 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 LARP4Q71RC2 724 aaKnown RBP eCLIP5.49□□□□□ -1.53
SNHG1-217ENST00000541578 RTN4RL1Q86UN2 441 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-217ENST00000541578 GGNQ86UU5 652 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 ZBTB46Q86UZ6 589 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 C11orf74Q86VG3 221 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 TAX1BP1Q86VP1 789 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 RTKN2Q8IZC4 609 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 FOXRED1Q96CU9 486 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-217ENST00000541578 C8orf48Q96LL4 319 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 GNRHR2Q96P88 292 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 FOXB1Q99853 325 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 KRTAP3-1Q9BYR8 98 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 DEF6Q9H4E7 631 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 CD248Q9HCU0 757 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 AASDHPPTQ9NRN7 309 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 MYRFQ9Y2G1 1151 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 ZKSCAN5Q9Y2L8 839 aa5.49□□□□□ -1.53
SNHG1-217ENST00000541578 BAZ1AQ9NRL2 1556 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-217ENST00000541578 ARHGAP6O43182 974 aa5.48□□□□□ -1.53
SNHG1-217ENST00000541578 MAFO75444 373 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-217ENST00000541578 ATF3P18847 181 aa5.48□□□□□ -1.53
SNHG1-217ENST00000541578 POU3F3P20264 500 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-217ENST00000541578 POU3F2P20265 443 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-217ENST00000541578 NEK2P51955 445 aa5.48□□□□□ -1.53
SNHG1-217ENST00000541578 OS9Q13438 667 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-217ENST00000541578 STAT4Q14765 748 aa5.48□□□□□ -1.53
SNHG1-217ENST00000541578 PCOLCEQ15113 449 aa5.48□□□□□ -1.53
SNHG1-217ENST00000541578 PCBP1Q15365 356 aaKnown RBP eCLIP5.48□□□□□ -1.53
SNHG1-217ENST00000541578 RNF151Q2KHN1 245 aa5.48□□□□□ -1.53
SNHG1-217ENST00000541578 TMEM200BQ69YZ2 307 aa5.48□□□□□ -1.53
SNHG1-217ENST00000541578 IQSEC1Q6DN90 963 aa5.48□□□□□ -1.53
SNHG1-217ENST00000541578 TCTN3Q6NUS6 607 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms