RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 RBM41Q96IZ5 413 aaKnown RBP16.35■□□□□ 0.21
HMGA2-210ENST00000541363 SCARA5Q6ZMJ2 495 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 LRRC59Q96AG4 307 aaKnown RBP16.35■□□□□ 0.21
HMGA2-210ENST00000541363 C6orf203Q9P0P8 240 aaPredicted RBP16.35■□□□□ 0.21
HMGA2-210ENST00000541363 ZFYVE9O95405 1425 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 GOLGA8JA6NMD2 632 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 GCKRQ14397 625 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 CYTH1Q15438 398 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 DNAJC7Q99615 494 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 WDR11Q9BZH6 1224 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 DISP3Q9P2K9 1392 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 GOLGA8IPA6NC78 632 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 CFAP73A6NFT4 308 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 CLIC2O15247 247 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 CYTH3O43739 400 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 PCP11498 1178 aaKnown RBP16.34■□□□□ 0.21
HMGA2-210ENST00000541363 KCNA2P16389 499 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 SF3B3Q15393 1217 aaKnown RBP16.34■□□□□ 0.21
HMGA2-210ENST00000541363 FANCBQ8NB91 859 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 ASIC4Q96FT7 647 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 DYRK4Q9NR20 520 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 ARHGEF11O15085 1522 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 VAMP4O75379 141 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 PMS2P54278 862 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 RAD23BP54727 409 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 BFSP2Q13515 415 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 ARHGAP17Q68EM7 881 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 CEP95Q96GE4 821 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 CYP4F11Q9HBI6 524 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 ABCB5Q2M3G0 1257 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 DCAF4L1Q3SXM0 396 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 ANKRD49Q8WVL7 239 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 CEP170P1Q96L14 293 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 DEPDC7Q96QD5 511 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 DPYSL4O14531 572 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 MEI1Q5TIA1 1274 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 CAPRIN2Q6IMN6 1127 aaKnown RBP16.34■□□□□ 0.21
HMGA2-210ENST00000541363 FAM129AQ9BZQ8 928 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 ADGRL1O94910 1474 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 HSPA2P54652 639 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 CASP8Q14790 479 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 IYDQ6PHW0 289 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 MAD2L2Q9UI95 211 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 FKBP3Q00688 224 aaKnown RBP16.34■□□□□ 0.21
HMGA2-210ENST00000541363 EMBQ6PCB8 327 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 HOMEZQ8IX15 550 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 RHOT2Q8IXI1 618 aa16.34■□□□□ 0.21
HMGA2-210ENST00000541363 DIS3LQ8TF46 1054 aaKnown RBP16.34■□□□□ 0.21
HMGA2-210ENST00000541363 CDCA7Q9BWT1 371 aaPredicted RBP16.34■□□□□ 0.21
HMGA2-210ENST00000541363 ALCAMQ13740 583 aa16.33■□□□□ 0.21
HMGA2-210ENST00000541363 RNF135Q8IUD6 432 aa16.33■□□□□ 0.21
HMGA2-210ENST00000541363 CLEC4FQ8N1N0 589 aa16.33■□□□□ 0.21
HMGA2-210ENST00000541363 CLIC6Q96NY7 704 aa16.33■□□□□ 0.21
HMGA2-210ENST00000541363 ACAP3Q96P50 834 aa16.33■□□□□ 0.21
HMGA2-210ENST00000541363 ASNSD1Q9NWL6 643 aa16.33■□□□□ 0.21
HMGA2-210ENST00000541363 AIPL1Q9NZN9 384 aa16.33■□□□□ 0.21
HMGA2-210ENST00000541363 DCDC2Q9UHG0 476 aa16.33■□□□□ 0.21
HMGA2-210ENST00000541363 ASAP2O43150 1006 aa16.33■□□□□ 0.21
HMGA2-210ENST00000541363 FAM107AO95990 144 aa16.33■□□□□ 0.21
HMGA2-210ENST00000541363 LRRC74AQ0VAA2 488 aa16.33■□□□□ 0.21
HMGA2-210ENST00000541363 CYGBQ8WWM9 190 aa16.33■□□□□ 0.21
HMGA2-210ENST00000541363 ANGPT2O15123 496 aa16.33■□□□□ 0.2
HMGA2-210ENST00000541363 TRADDQ15628 312 aa16.33■□□□□ 0.2
HMGA2-210ENST00000541363 ASPRV1Q53RT3 343 aa16.33■□□□□ 0.2
HMGA2-210ENST00000541363 CC2D2BQ6DHV5 1058 aa16.33■□□□□ 0.2
HMGA2-210ENST00000541363 USP17L12C9JPN9 530 aa16.33■□□□□ 0.2
HMGA2-210ENST00000541363 USP17L21D6R901 530 aa16.33■□□□□ 0.2
HMGA2-210ENST00000541363 FAM167BQ9BTA0 163 aa16.33■□□□□ 0.2
HMGA2-210ENST00000541363 NCALDP61601 193 aa16.33■□□□□ 0.2
HMGA2-210ENST00000541363 PARP9Q8IXQ6 854 aa16.33■□□□□ 0.2
HMGA2-210ENST00000541363 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.33■□□□□ 0.2
HMGA2-210ENST00000541363 TGS1Q96RS0 853 aaKnown RBP16.33■□□□□ 0.2
HMGA2-210ENST00000541363 SH3GL1Q99961 368 aa16.33■□□□□ 0.2
HMGA2-210ENST00000541363 TSR3Q9UJK0 312 aaKnown RBP16.33■□□□□ 0.2
HMGA2-210ENST00000541363 NFU1Q9UMS0 254 aa16.33■□□□□ 0.2
HMGA2-210ENST00000541363 TBC1D10BQ4KMP7 808 aaPredicted RBP16.33■□□□□ 0.2
HMGA2-210ENST00000541363 SLC10A5Q5PT55 438 aa16.33■□□□□ 0.2
HMGA2-210ENST00000541363 CCDC103Q8IW40 242 aa16.33■□□□□ 0.2
HMGA2-210ENST00000541363 SP110Q9HB58 689 aa16.33■□□□□ 0.2
HMGA2-210ENST00000541363 TMEM63CQ9P1W3 806 aa16.33■□□□□ 0.2
HMGA2-210ENST00000541363 NAALADL2Q58DX5 795 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 SLFN13Q68D06 897 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 BBS7Q8IWZ6 715 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 TM6SF1Q9BZW5 370 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 DCTN4Q9UJW0 460 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 ARFIP2P53365 341 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 SIKE1Q9BRV8 207 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 NBPF26B4DH59 902 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 OSTNP61366 133 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 HIC1Q14526 733 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 CDC37Q16543 378 aaPredicted RBP16.32■□□□□ 0.2
HMGA2-210ENST00000541363 NBPF15Q8N660 670 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 FOPNLQ96NB1 174 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 AMNQ9BXJ7 453 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 RWDD2AQ9UIY3 292 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 PCDHA4Q9UN74 947 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 CFAP65Q6ZU64 1925 aaKnown RBP16.32■□□□□ 0.2
HMGA2-210ENST00000541363 LRRC53A6NM62 1247 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 NFIBO00712 420 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 PPP6R2O75170 966 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms