RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 SAPCD2Q86UD0 394 aa7.23□□□□□ -1.25
SUDS3-202ENST00000541280 VPS37DQ86XT2 251 aa7.23□□□□□ -1.25
SUDS3-202ENST00000541280 SYNE4Q8N205 404 aa7.23□□□□□ -1.25
SUDS3-202ENST00000541280 TSPYL6Q8N831 410 aa7.23□□□□□ -1.25
SUDS3-202ENST00000541280 NPLOC4Q8TAT6 608 aa7.23□□□□□ -1.25
SUDS3-202ENST00000541280 ALG3Q92685 438 aa7.23□□□□□ -1.25
SUDS3-202ENST00000541280 CWC25Q9NXE8 425 aaPredicted RBP7.23□□□□□ -1.25
SUDS3-202ENST00000541280 ACTR10Q9NZ32 417 aa7.23□□□□□ -1.25
SUDS3-202ENST00000541280 CLEC1BQ9P126 229 aa7.23□□□□□ -1.25
SUDS3-202ENST00000541280 PRKAG3Q9UGI9 489 aa7.23□□□□□ -1.25
SUDS3-202ENST00000541280 MYH14Q7Z406 1995 aaKnown RBP7.22□□□□□ -1.25
SUDS3-202ENST00000541280 PI4KAP2A4QPH2 592 aa7.22□□□□□ -1.25
SUDS3-202ENST00000541280 E9PSI1 815 aa7.22□□□□□ -1.25
SUDS3-202ENST00000541280 SMAD7O15105 426 aaKnown RBP7.22□□□□□ -1.25
SUDS3-202ENST00000541280 PDE8AO60658 829 aa7.22□□□□□ -1.25
SUDS3-202ENST00000541280 PMLP29590 882 aa7.22□□□□□ -1.25
SUDS3-202ENST00000541280 IARSP41252 1262 aaKnown RBP7.22□□□□□ -1.25
SUDS3-202ENST00000541280 DLX2Q07687 328 aaPredicted RBP7.22□□□□□ -1.25
SUDS3-202ENST00000541280 GRAPQ13588 217 aa7.22□□□□□ -1.25
SUDS3-202ENST00000541280 TESK1Q15569 626 aa7.22□□□□□ -1.25
SUDS3-202ENST00000541280 CCDC152Q4G0S7 254 aa7.22□□□□□ -1.25
SUDS3-202ENST00000541280 Q8N1Y9 231 aa7.22□□□□□ -1.25
SUDS3-202ENST00000541280 PI4KAP1Q8N8J0 262 aa7.22□□□□□ -1.25
SUDS3-202ENST00000541280 SMC1BQ8NDV3 1235 aa7.22□□□□□ -1.25
SUDS3-202ENST00000541280 GRAPLQ8TC17 118 aaPredicted RBP7.22□□□□□ -1.25
SUDS3-202ENST00000541280 PLEKHO2Q8TD55 490 aa7.22□□□□□ -1.25
SUDS3-202ENST00000541280 TSR2Q969E8 191 aaKnown RBP7.22□□□□□ -1.25
SUDS3-202ENST00000541280 MYD88Q99836 296 aa7.22□□□□□ -1.25
SUDS3-202ENST00000541280 RTFDC1Q9BY42 306 aaPredicted RBP7.22□□□□□ -1.25
SUDS3-202ENST00000541280 MAP3K2Q9Y2U5 619 aa7.22□□□□□ -1.25
SUDS3-202ENST00000541280 PMF1-BGLAPU3KQ54 211 aa7.22□□□□□ -1.25
SUDS3-202ENST00000541280 FANCIQ9NVI1 1328 aa7.22□□□□□ -1.25
SUDS3-202ENST00000541280 TUBGCP6Q96RT7 1819 aa7.22□□□□□ -1.25
SUDS3-202ENST00000541280 FZD9O00144 591 aa7.21□□□□□ -1.26
SUDS3-202ENST00000541280 SCG5P05408 212 aa7.21□□□□□ -1.26
SUDS3-202ENST00000541280 THBDP07204 575 aa7.21□□□□□ -1.26
SUDS3-202ENST00000541280 CT47B1P0C2W7 299 aaPredicted RBP7.21□□□□□ -1.26
SUDS3-202ENST00000541280 TCF3P15923 654 aa7.21□□□□□ -1.26
SUDS3-202ENST00000541280 HSPA6P17066 643 aa7.21□□□□□ -1.26
SUDS3-202ENST00000541280 MC3RP41968 323 aa7.21□□□□□ -1.26
SUDS3-202ENST00000541280 RPS8P62241 208 aaKnown RBP7.21□□□□□ -1.26
SUDS3-202ENST00000541280 EXOSC9Q06265 439 aaKnown RBP7.21□□□□□ -1.26
SUDS3-202ENST00000541280 E4F1Q66K89 784 aaPredicted RBP7.21□□□□□ -1.26
SUDS3-202ENST00000541280 C6orf15Q6UXA7 325 aaPredicted RBP7.21□□□□□ -1.26
SUDS3-202ENST00000541280 DPP8Q6V1X1 898 aaPredicted RBP7.21□□□□□ -1.26
SUDS3-202ENST00000541280 FRMD5Q7Z6J6 570 aa7.21□□□□□ -1.26
SUDS3-202ENST00000541280 PNMA8AQ86V59 439 aaPredicted RBP7.21□□□□□ -1.26
SUDS3-202ENST00000541280 FAM178BQ8IXR5 827 aa7.21□□□□□ -1.26
SUDS3-202ENST00000541280 LINS1Q8NG48 757 aa7.21□□□□□ -1.26
SUDS3-202ENST00000541280 FEZF2Q8TBJ5 459 aa7.21□□□□□ -1.26
SUDS3-202ENST00000541280 FRS2Q8WU20 508 aa7.21□□□□□ -1.26
SUDS3-202ENST00000541280 DPF3Q92784 378 aa7.21□□□□□ -1.26
SUDS3-202ENST00000541280 FAM89AQ96GI7 184 aa7.21□□□□□ -1.26
SUDS3-202ENST00000541280 GPRC5CQ9NQ84 441 aa7.21□□□□□ -1.26
SUDS3-202ENST00000541280 ABCC12Q96J65 1359 aa7.2□□□□□ -1.26
SUDS3-202ENST00000541280 FOXD2O60548 495 aaPredicted RBP7.2□□□□□ -1.26
SUDS3-202ENST00000541280 SSBP05455 408 aaKnown RBP eCLIP7.2□□□□□ -1.26
SUDS3-202ENST00000541280 FGRP09769 529 aa7.2□□□□□ -1.26
SUDS3-202ENST00000541280 SLURP1P55000 103 aa7.2□□□□□ -1.26
SUDS3-202ENST00000541280 IQCEQ6IPM2 695 aa7.2□□□□□ -1.26
SUDS3-202ENST00000541280 LIPIQ6XZB0 460 aa7.2□□□□□ -1.26
SUDS3-202ENST00000541280 GPC2Q8N158 579 aa7.2□□□□□ -1.26
SUDS3-202ENST00000541280 DNAAF4Q8WXU2 420 aa7.2□□□□□ -1.26
SUDS3-202ENST00000541280 TEPSINQ96N21 525 aa7.2□□□□□ -1.26
SUDS3-202ENST00000541280 CDC5LQ99459 802 aaKnown RBP7.2□□□□□ -1.26
SUDS3-202ENST00000541280 EYA3Q99504 573 aa7.2□□□□□ -1.26
SUDS3-202ENST00000541280 TINF2Q9BSI4 451 aa7.2□□□□□ -1.26
SUDS3-202ENST00000541280 KRTAP9-3Q9BYQ3 159 aa7.2□□□□□ -1.26
SUDS3-202ENST00000541280 RXFP1Q9HBX9 757 aa7.2□□□□□ -1.26
SUDS3-202ENST00000541280 NMRK2Q9NPI5 230 aa7.2□□□□□ -1.26
SUDS3-202ENST00000541280 ZNF277Q9NRM2 450 aaPredicted RBP7.2□□□□□ -1.26
SUDS3-202ENST00000541280 FAN1Q9Y2M0 1017 aa7.2□□□□□ -1.26
SUDS3-202ENST00000541280 CDHR2Q9BYE9 1310 aa7.2□□□□□ -1.26
SUDS3-202ENST00000541280 SIPA1L3O60292 1781 aaPredicted RBP7.2□□□□□ -1.26
SUDS3-202ENST00000541280 NRXN2Q9P2S2 1712 aa7.19□□□□□ -1.26
SUDS3-202ENST00000541280 SUSD5O60279 629 aa7.19□□□□□ -1.26
SUDS3-202ENST00000541280 CAPNS1P04632 268 aa7.19□□□□□ -1.26
SUDS3-202ENST00000541280 PRELPP51888 382 aa7.19□□□□□ -1.26
SUDS3-202ENST00000541280 CACNB2Q08289 660 aaPredicted RBP7.19□□□□□ -1.26
SUDS3-202ENST00000541280 GNL2Q13823 731 aaKnown RBP7.19□□□□□ -1.26
SUDS3-202ENST00000541280 TNIP1Q15025 636 aa7.19□□□□□ -1.26
SUDS3-202ENST00000541280 INF2Q27J81 1249 aa7.19□□□□□ -1.26
SUDS3-202ENST00000541280 DCP2Q8IU60 420 aaKnown RBP7.19□□□□□ -1.26
SUDS3-202ENST00000541280 NIM1KQ8IY84 436 aa7.19□□□□□ -1.26
SUDS3-202ENST00000541280 PLA2G12BQ9BX93 195 aa7.19□□□□□ -1.26
SUDS3-202ENST00000541280 KRTAP4-2Q9BYR5 136 aa7.19□□□□□ -1.26
SUDS3-202ENST00000541280 MRVI1Q9Y6F6 885 aa7.19□□□□□ -1.26
SUDS3-202ENST00000541280 ABCC4O15439 1325 aa7.19□□□□□ -1.26
SUDS3-202ENST00000541280 ZNF521Q96K83 1311 aa7.19□□□□□ -1.26
SUDS3-202ENST00000541280 PPIP5K2O43314 1243 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 ALDH1L1O75891 902 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 DDNO94850 711 aaPredicted RBP7.18□□□□□ -1.26
SUDS3-202ENST00000541280 FUCA1P04066 466 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 NTRK1P04629 796 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 IGKV5-2P06315 115 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 SYN1P17600 705 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 HOXC12P31275 282 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 BUD31P41223 144 aaPredicted RBP7.18□□□□□ -1.26
SUDS3-202ENST00000541280 SLC6A11P48066 632 aa7.18□□□□□ -1.26
SUDS3-202ENST00000541280 KCNC1P48547 511 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms