RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 LEMD3Q9Y2U8 911 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 SNX5Q9Y5X3 404 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 MYO5CQ9NQX4 1742 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 CFAP69A5D8W1 941 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 ALAS1P13196 640 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 EXOSC10Q01780 885 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 MED21Q13503 144 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 TRPV6Q9H1D0 765 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 ADGRL3Q9HAR2 1447 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 KIF28PB7ZC32 967 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 LPXNO60711 386 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 TAC1P20366 129 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 PSMD7P51665 324 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 CYB5R4Q7L1T6 521 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 TRIM59Q8IWR1 403 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 CASP2P42575 452 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 HIC1Q14526 733 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 RASSF3Q86WH2 238 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 MCUQ8NE86 351 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 ZIM3Q96PE6 472 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 POLR3CQ9BUI4 534 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 MLXIPLQ9NP71 852 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 AMACRQ9UHK6 382 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 NEDD4P46934 1319 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 A0A1W2PQJ5 194 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 ENO4A6NNW6 628 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 KCNA3P22001 575 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 PI16Q6UXB8 463 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 EXOC8Q8IYI6 725 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 DHX38Q92620 1227 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 RNPC3Q96LT9 517 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 MEIS1O00470 390 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 CDH16O75309 829 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 CHEK2O96017 543 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 AP1B1Q10567 949 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 SLC18A3Q16572 532 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 NAALADL2Q58DX5 795 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 FAM129AQ9BZQ8 928 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 FOXP3Q9BZS1 431 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 CYP26B1Q9NR63 512 aa15.97■□□□□ 0.15
SMARCA4-207ENST00000541122 EPHB1P54762 984 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 CYB5D1Q6P9G0 228 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 TMEM154Q6P9G4 183 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 GCOM2Q9BZD3 368 aaPredicted RBP15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 ADAM22Q9P0K1 906 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 PALLDQ8WX93 1383 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 REXO1L1PQ8IX06 675 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 ORAI2Q96SN7 254 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 ISCUQ9H1K1 167 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 KANSL2Q9H9L4 492 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 EHD2Q9NZN4 543 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 CALB1P05937 261 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 IL6STP40189 918 aaPredicted RBP15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 ABCB5Q2M3G0 1257 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 OXER1Q8TDS5 423 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 COA7Q96BR5 231 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 ALKBH8Q96BT7 664 aaKnown RBP15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 BTBD6Q96KE9 485 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 AS3MTQ9HBK9 375 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 NOD2Q9HC29 1040 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 PDP2Q9P2J9 529 aa15.96■□□□□ 0.15
SMARCA4-207ENST00000541122 ZNF185O15231 689 aa15.96■□□□□ 0.14
SMARCA4-207ENST00000541122 FOXN1O15353 648 aa15.96■□□□□ 0.14
SMARCA4-207ENST00000541122 XPOTO43592 962 aaKnown RBP15.96■□□□□ 0.14
SMARCA4-207ENST00000541122 ITKQ08881 620 aa15.96■□□□□ 0.14
SMARCA4-207ENST00000541122 KNOP1Q1ED39 458 aaKnown RBP15.96■□□□□ 0.14
SMARCA4-207ENST00000541122 LONP2Q86WA8 852 aa15.96■□□□□ 0.14
SMARCA4-207ENST00000541122 CCNYQ8ND76 341 aa15.96■□□□□ 0.14
SMARCA4-207ENST00000541122 FBXL13Q8NEE6 735 aa15.96■□□□□ 0.14
SMARCA4-207ENST00000541122 ING2Q9H160 280 aa15.96■□□□□ 0.14
SMARCA4-207ENST00000541122 WARS2Q9UGM6 360 aaKnown RBP15.96■□□□□ 0.14
SMARCA4-207ENST00000541122 GINS2Q9Y248 185 aa15.96■□□□□ 0.14
SMARCA4-207ENST00000541122 SLC4A7Q9Y6M7 1214 aa15.96■□□□□ 0.14
SMARCA4-207ENST00000541122 PHF20L1A8MW92 1017 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 TOM1O60784 492 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 FRMD5Q7Z6J6 570 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 TEX2Q8IWB9 1127 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 SLC26A7Q8TE54 656 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 CHP1Q99653 195 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 NACA2Q9H009 215 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 SLC38A10Q9HBR0 1119 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 TLR3O15455 904 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 CDC27P30260 824 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 FXR1P51114 621 aaKnown RBP eCLIP15.95■□□□□ 0.143e-6■■■□□ 17.4
SMARCA4-207ENST00000541122 NOP14P78316 857 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 OCRLQ01968 901 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 FMR1Q06787 632 aaKnown RBP eCLIP15.95■□□□□ 0.144e-7■■■□□ 18.6
SMARCA4-207ENST00000541122 ERICH1Q86X53 443 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 BBS5Q8N3I7 341 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 SLC7A3Q8WY07 619 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 RIN2Q8WYP3 895 aaPredicted RBP15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 ANO3Q9BYT9 981 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 CCPG1Q9ULG6 757 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 PHF2O75151 1096 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 KRT14P02533 472 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 NEK2P51955 445 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 ZNF211Q13398 564 aaPredicted RBP15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 ADSSL1Q8N142 457 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 NUP85Q9BW27 656 aa15.95■□□□□ 0.14
SMARCA4-207ENST00000541122 BHMT2Q9H2M3 363 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms