RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 RSPH1Q8WYR4 309 aa30.37■■■□□ 2.45
CHFR-218ENST00000540963 PPP1R16BQ96T49 567 aa30.37■■■□□ 2.45
CHFR-218ENST00000540963 ESYT2A0FGR8 921 aa30.36■■■□□ 2.45
CHFR-218ENST00000540963 NLRP11P59045 1033 aaKnown RBP30.36■■■□□ 2.45
CHFR-218ENST00000540963 SMC1AQ14683 1233 aaKnown RBP30.36■■■□□ 2.45
CHFR-218ENST00000540963 LINC01465Q8N7H1 131 aa30.36■■■□□ 2.45
CHFR-218ENST00000540963 ADAM7Q9H2U9 754 aa30.36■■■□□ 2.45
CHFR-218ENST00000540963 ADAMTS10Q9H324 1103 aa30.36■■■□□ 2.45
CHFR-218ENST00000540963 ANO2Q9NQ90 1003 aa30.36■■■□□ 2.45
CHFR-218ENST00000540963 BRPF3Q9ULD4 1205 aa30.36■■■□□ 2.45
CHFR-218ENST00000540963 SORCS3Q9UPU3 1222 aa30.36■■■□□ 2.45
CHFR-218ENST00000540963 CFAP54Q96N23 3096 aa30.36■■■□□ 2.45
CHFR-218ENST00000540963 EOMESO95936 686 aa30.35■■■□□ 2.45
CHFR-218ENST00000540963 MTMR3Q13615 1198 aa30.35■■■□□ 2.45
CHFR-218ENST00000540963 BMS1Q14692 1282 aaKnown RBP30.35■■■□□ 2.45
CHFR-218ENST00000540963 JAKMIP3Q5VZ66 844 aa30.35■■■□□ 2.45
CHFR-218ENST00000540963 LLGL2Q6P1M3 1020 aa30.35■■■□□ 2.45
CHFR-218ENST00000540963 DHX32Q7L7V1 743 aaKnown RBP30.35■■■□□ 2.45
CHFR-218ENST00000540963 HCFC2Q9Y5Z7 792 aa30.35■■■□□ 2.45
CHFR-218ENST00000540963 CARNS1A5YM72 827 aa30.34■■■□□ 2.45
CHFR-218ENST00000540963 PFKFB3Q16875 520 aaPredicted RBP30.34■■■□□ 2.45
CHFR-218ENST00000540963 EFCAB12Q6NXP0 572 aa30.34■■■□□ 2.45
CHFR-218ENST00000540963 SLC39A11Q8N1S5 342 aa30.34■■■□□ 2.45
CHFR-218ENST00000540963 KREMEN2Q8NCW0 462 aa30.34■■■□□ 2.45
CHFR-218ENST00000540963 ATOH1Q92858 354 aaPredicted RBP30.34■■■□□ 2.45
CHFR-218ENST00000540963 ZMYND12Q9H0C1 365 aa30.34■■■□□ 2.45
CHFR-218ENST00000540963 AKT3Q9Y243 479 aa30.34■■■□□ 2.45
CHFR-218ENST00000540963 A0A0U1RQF3 1178 aa30.33■■■□□ 2.45
CHFR-218ENST00000540963 C2orf71A6NGG8 1288 aa30.33■■■□□ 2.45
CHFR-218ENST00000540963 GOLGA8AA7E2F4 631 aa30.33■■■□□ 2.45
CHFR-218ENST00000540963 GOLGA8BA8MQT2 603 aa30.33■■■□□ 2.45
CHFR-218ENST00000540963 PROB1E7EW31 1015 aa30.33■■■□□ 2.45
CHFR-218ENST00000540963 CLCN3P51790 818 aa30.33■■■□□ 2.45
CHFR-218ENST00000540963 TSGA10IPQ3SY00 556 aa30.33■■■□□ 2.45
CHFR-218ENST00000540963 CCDC12Q8WUD4 166 aaPredicted RBP30.33■■■□□ 2.45
CHFR-218ENST00000540963 MRPL9Q9BYD2 267 aaKnown RBP30.33■■■□□ 2.45
CHFR-218ENST00000540963 FAM217BQ9NTX9 383 aaPredicted RBP30.33■■■□□ 2.45
CHFR-218ENST00000540963 GABBR1Q9UBS5 961 aa30.33■■■□□ 2.45
CHFR-218ENST00000540963 GALR2O43603 387 aaPredicted RBP30.32■■■□□ 2.44
CHFR-218ENST00000540963 CIITAP33076 1130 aa30.32■■■□□ 2.44
CHFR-218ENST00000540963 MTHFRP42898 656 aa30.32■■■□□ 2.44
CHFR-218ENST00000540963 CLLU1OSQ5K130 101 aa30.32■■■□□ 2.44
CHFR-218ENST00000540963 APOL5Q9BWW9 433 aa30.32■■■□□ 2.44
CHFR-218ENST00000540963 FAM86C1Q9NVL1 165 aa30.32■■■□□ 2.44
CHFR-218ENST00000540963 DACT1Q9NYF0 836 aa30.32■■■□□ 2.44
CHFR-218ENST00000540963 PLXNA3P51805 1871 aa30.31■■■□□ 2.44
CHFR-218ENST00000540963 ZFHX2Q9C0A1 2572 aaPredicted RBP30.31■■■□□ 2.44
CHFR-218ENST00000540963 ZNF598Q86UK7 904 aaKnown RBP30.31■■■□□ 2.44
CHFR-218ENST00000540963 REXO1Q8N1G1 1221 aaKnown RBP30.31■■■□□ 2.44
CHFR-218ENST00000540963 POMKQ9H5K3 350 aa30.31■■■□□ 2.44
CHFR-218ENST00000540963 C6orf50Q9HD87 102 aa30.31■■■□□ 2.44
CHFR-218ENST00000540963 NRBP2Q9NSY0 501 aa30.31■■■□□ 2.44
CHFR-218ENST00000540963 CCDC196A0A1B0GTZ2 297 aa30.3■■■□□ 2.44
CHFR-218ENST00000540963 WDR64B1ANS9 1081 aa30.3■■■□□ 2.44
CHFR-218ENST00000540963 DARSP14868 501 aaKnown RBP30.3■■■□□ 2.44
CHFR-218ENST00000540963 CDC27P30260 824 aa30.3■■■□□ 2.44
CHFR-218ENST00000540963 PBX3P40426 434 aa30.3■■■□□ 2.44
CHFR-218ENST00000540963 ALDH7A1P49419 539 aaKnown RBP30.3■■■□□ 2.44
CHFR-218ENST00000540963 TSHZ2Q9NRE2 1034 aa30.3■■■□□ 2.44
CHFR-218ENST00000540963 SAMM50Q9Y512 469 aa30.3■■■□□ 2.44
CHFR-218ENST00000540963 KLF18A0A0U1RQI7 1052 aa30.29■■■□□ 2.44
CHFR-218ENST00000540963 CLASP2O75122 1294 aaKnown RBP30.29■■■□□ 2.44
CHFR-218ENST00000540963 PDGFBP01127 241 aaPredicted RBP30.29■■■□□ 2.44
CHFR-218ENST00000540963 GNA11P29992 359 aa30.29■■■□□ 2.44
CHFR-218ENST00000540963 GPC3P51654 580 aa30.29■■■□□ 2.44
CHFR-218ENST00000540963 CDC42EP1Q00587 391 aa30.29■■■□□ 2.44
CHFR-218ENST00000540963 GIT2Q14161 759 aa30.29■■■□□ 2.44
CHFR-218ENST00000540963 TRMT1LQ7Z2T5 733 aaKnown RBP30.29■■■□□ 2.44
CHFR-218ENST00000540963 DZANK1Q9NVP4 752 aa30.29■■■□□ 2.44
CHFR-218ENST00000540963 IRAK3Q9Y616 596 aa30.29■■■□□ 2.44
CHFR-218ENST00000540963 C2CD4DB7Z1M9 353 aa30.28■■■□□ 2.44
CHFR-218ENST00000540963 OATP04181 439 aa30.28■■■□□ 2.44
CHFR-218ENST00000540963 SP100P23497 879 aaPredicted RBP30.28■■■□□ 2.44
CHFR-218ENST00000540963 KRT32Q14532 448 aa30.28■■■□□ 2.44
CHFR-218ENST00000540963 PRR16Q569H4 304 aa30.28■■■□□ 2.44
CHFR-218ENST00000540963 ZDHHC14Q8IZN3 488 aa30.28■■■□□ 2.44
CHFR-218ENST00000540963 LRRC71Q8N4P6 559 aa30.28■■■□□ 2.44
CHFR-218ENST00000540963 TRAIPQ9BWF2 469 aa30.28■■■□□ 2.44
CHFR-218ENST00000540963 CHST12Q9NRB3 414 aa30.28■■■□□ 2.44
CHFR-218ENST00000540963 USTQ9Y2C2 406 aa30.28■■■□□ 2.44
CHFR-218ENST00000540963 H0Y858 1186 aa30.27■■■□□ 2.44
CHFR-218ENST00000540963 BRD1O95696 1058 aa30.27■■■□□ 2.44
CHFR-218ENST00000540963 HMGB1P09429 215 aaKnown RBP30.27■■■□□ 2.44
CHFR-218ENST00000540963 POLGP54098 1239 aaPredicted RBP30.27■■■□□ 2.44
CHFR-218ENST00000540963 PLCD3Q8N3E9 789 aa30.27■■■□□ 2.44
CHFR-218ENST00000540963 RNF169Q8NCN4 708 aa30.27■■■□□ 2.44
CHFR-218ENST00000540963 TMEM169Q96HH4 297 aa30.27■■■□□ 2.44
CHFR-218ENST00000540963 TCEANC2Q96MN5 208 aa30.27■■■□□ 2.44
CHFR-218ENST00000540963 ZNF862O60290 1169 aa30.26■■■□□ 2.43
CHFR-218ENST00000540963 BCAR1P56945 870 aa30.26■■■□□ 2.43
CHFR-218ENST00000540963 KIAA1841Q6NSI8 718 aa30.26■■■□□ 2.43
CHFR-218ENST00000540963 BICD2Q8TD16 824 aa30.26■■■□□ 2.43
CHFR-218ENST00000540963 HELQQ8TDG4 1101 aa30.26■■■□□ 2.43
CHFR-218ENST00000540963 LENG9Q96B70 501 aa30.26■■■□□ 2.43
CHFR-218ENST00000540963 DISC1Q9NRI5 854 aa30.26■■■□□ 2.43
CHFR-218ENST00000540963 CXCL14O95715 111 aa30.25■■■□□ 2.43
CHFR-218ENST00000540963 SFNP31947 248 aa30.25■■■□□ 2.43
CHFR-218ENST00000540963 FOXK2Q01167 660 aa30.25■■■□□ 2.43
CHFR-218ENST00000540963 SCLT1Q96NL6 688 aa30.25■■■□□ 2.43
CHFR-218ENST00000540963 RIT2Q99578 217 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms