RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 UGCGQ16739 394 aa15.07■□□□□ 0
RTN3-210ENST00000540798 WDR93Q6P2C0 686 aa15.07■□□□□ 0
RTN3-210ENST00000540798 HS2ST1Q7LGA3 356 aa15.07■□□□□ 0
RTN3-210ENST00000540798 GPRASP2Q96D09 838 aa15.07■□□□□ 0
RTN3-210ENST00000540798 GPRC5DQ9NZD1 345 aa15.07■□□□□ 0
RTN3-210ENST00000540798 A0A087X0T9 212 aa15.07■□□□□ 0
RTN3-210ENST00000540798 SASH3O75995 380 aa15.07■□□□□ 0
RTN3-210ENST00000540798 FAM228BP0C875 321 aa15.07■□□□□ 0
RTN3-210ENST00000540798 PLS3P13797 630 aa15.07■□□□□ 0
RTN3-210ENST00000540798 YWHABP31946 246 aaKnown RBP15.07■□□□□ 0
RTN3-210ENST00000540798 PLA2G4AP47712 749 aa15.07■□□□□ 0
RTN3-210ENST00000540798 KRT76Q01546 638 aa15.07■□□□□ 0
RTN3-210ENST00000540798 ITIH3Q06033 890 aa15.07■□□□□ 0
RTN3-210ENST00000540798 NAB2Q15742 525 aa15.07■□□□□ 0
RTN3-210ENST00000540798 GPIHBP1Q8IV16 184 aa15.07■□□□□ 0
RTN3-210ENST00000540798 ARFGAP3Q9NP61 516 aa15.07■□□□□ 0
RTN3-210ENST00000540798 GCNT4Q9P109 453 aa15.07■□□□□ 0
RTN3-210ENST00000540798 DAAM1Q9Y4D1 1078 aa15.07■□□□□ 0
RTN3-210ENST00000540798 CTDP1Q9Y5B0 961 aaPredicted RBP15.07■□□□□ 0
RTN3-210ENST00000540798 OTOFQ9HC10 1997 aa15.06■□□□□ 0
RTN3-210ENST00000540798 BAATQ14032 418 aaPredicted RBP15.06■□□□□ 0
RTN3-210ENST00000540798 C10orf76Q5T2E6 689 aa15.06■□□□□ 0
RTN3-210ENST00000540798 ARHGEF16Q5VV41 709 aa15.06■□□□□ 0
RTN3-210ENST00000540798 CATSPERGQ6ZRH7 1159 aa15.06■□□□□ 0
RTN3-210ENST00000540798 CREG2Q8IUH2 290 aa15.06■□□□□ 0
RTN3-210ENST00000540798 INPP4AQ96PE3 977 aaPredicted RBP15.06■□□□□ 0
RTN3-210ENST00000540798 ALS2CR12Q96Q35 445 aa15.06■□□□□ 0
RTN3-210ENST00000540798 FUT8Q9BYC5 575 aa15.06■□□□□ 0
RTN3-210ENST00000540798 WDR64B1ANS9 1081 aa15.06■□□□□ 0
RTN3-210ENST00000540798 MAFGO15525 162 aa15.06■□□□□ 0
RTN3-210ENST00000540798 PPP1R12BO60237 982 aaPredicted RBP15.06■□□□□ 0
RTN3-210ENST00000540798 CCND2P30279 289 aa15.06■□□□□ 0
RTN3-210ENST00000540798 FMO5P49326 533 aa15.06■□□□□ 0
RTN3-210ENST00000540798 PSMC5P62195 406 aa15.06■□□□□ 0
RTN3-210ENST00000540798 ZNF771Q7L3S4 317 aaPredicted RBP15.06■□□□□ 0
RTN3-210ENST00000540798 ZNF571Q7Z3V5 609 aaPredicted RBP15.06■□□□□ 0
RTN3-210ENST00000540798 TMEM206Q9H813 350 aa15.06■□□□□ 0
RTN3-210ENST00000540798 LUC7LQ9NQ29 371 aaKnown RBP15.06■□□□□ 0
RTN3-210ENST00000540798 ANKEF1Q9NU02 776 aa15.06■□□□□ 0
RTN3-210ENST00000540798 LARSQ9P2J5 1176 aaKnown RBP15.06■□□□□ 0
RTN3-210ENST00000540798 MYPNQ86TC9 1320 aa15.06■□□□□ 0
RTN3-210ENST00000540798 PDE2AO00408 941 aaPredicted RBP15.06■□□□□ 0
RTN3-210ENST00000540798 HMGCS2P54868 508 aa15.06■□□□□ 0
RTN3-210ENST00000540798 GTF2BQ00403 316 aa15.06■□□□□ 0
RTN3-210ENST00000540798 PTK2Q05397 1052 aa15.06■□□□□ 0
RTN3-210ENST00000540798 BEND6Q5SZJ8 279 aaPredicted RBP15.06■□□□□ 0
RTN3-210ENST00000540798 ZNF746Q6NUN9 644 aaPredicted RBP15.06■□□□□ 0
RTN3-210ENST00000540798 OLIG1Q8TAK6 271 aa15.06■□□□□ 0
RTN3-210ENST00000540798 NOX5Q96PH1 765 aa15.06■□□□□ 0
RTN3-210ENST00000540798 DOCK5Q9H7D0 1870 aa15.05■□□□□ 0
RTN3-210ENST00000540798 POLR2AP24928 1970 aaKnown RBP15.05■□□□□ 0
RTN3-210ENST00000540798 MAP2K7O14733 419 aa15.05■□□□□ -0
RTN3-210ENST00000540798 MYCLP12524 364 aaPredicted RBP15.05■□□□□ -0
RTN3-210ENST00000540798 NCKAP1LP55160 1127 aa15.05■□□□□ -0
RTN3-210ENST00000540798 IRX3P78415 501 aaPredicted RBP15.05■□□□□ -0
RTN3-210ENST00000540798 TMEM132BQ14DG7 1078 aa15.05■□□□□ -0
RTN3-210ENST00000540798 R3HDM1Q15032 1099 aaKnown RBP15.05■□□□□ -0
RTN3-210ENST00000540798 TCERG1LQ5VWI1 586 aa15.05■□□□□ -0
RTN3-210ENST00000540798 SNRNP48Q6IEG0 339 aaKnown RBP15.05■□□□□ -0
RTN3-210ENST00000540798 IQCEQ6IPM2 695 aa15.05■□□□□ -0
RTN3-210ENST00000540798 FRMD4BQ9Y2L6 1034 aa15.05■□□□□ -0
RTN3-210ENST00000540798 AFG3L2Q9Y4W6 797 aa15.05■□□□□ -0
RTN3-210ENST00000540798 PCDHGC5Q9Y5F6 944 aa15.05■□□□□ -0
RTN3-210ENST00000540798 K7ENM7 598 aa15.05■□□□□ -0
RTN3-210ENST00000540798 ZNF185O15231 689 aa15.05■□□□□ -0
RTN3-210ENST00000540798 HIRAP54198 1017 aaPredicted RBP15.05■□□□□ -0
RTN3-210ENST00000540798 SNRPFP62306 86 aaKnown RBP15.05■□□□□ -0
RTN3-210ENST00000540798 LONRF2Q1L5Z9 754 aa15.05■□□□□ -0
RTN3-210ENST00000540798 SH3D19Q5HYK7 790 aa15.05■□□□□ -0
RTN3-210ENST00000540798 PRAMEF18Q5VWM3 479 aa15.05■□□□□ -0
RTN3-210ENST00000540798 NSMFQ6X4W1 530 aa15.05■□□□□ -0
RTN3-210ENST00000540798 GPC2Q8N158 579 aa15.05■□□□□ -0
RTN3-210ENST00000540798 MSL3Q8N5Y2 521 aaKnown RBP15.05■□□□□ -0
RTN3-210ENST00000540798 NLGN2Q8NFZ4 835 aa15.05■□□□□ -0
RTN3-210ENST00000540798 TARSL2A2RTX5 802 aaKnown RBP15.04■□□□□ -0
RTN3-210ENST00000540798 BACH1O14867 736 aa15.04■□□□□ -0
RTN3-210ENST00000540798 RGS20O76081 388 aa15.04■□□□□ -0
RTN3-210ENST00000540798 NR3C2P08235 984 aa15.04■□□□□ -0
RTN3-210ENST00000540798 ACCSQ96QU6 501 aa15.04■□□□□ -0
RTN3-210ENST00000540798 TLR10Q9BXR5 811 aa15.04■□□□□ -0
RTN3-210ENST00000540798 GGA3Q9NZ52 723 aa15.04■□□□□ -0
RTN3-210ENST00000540798 ADAMTS1Q9UHI8 967 aa15.04■□□□□ -0
RTN3-210ENST00000540798 FZD1Q9UP38 647 aa15.04■□□□□ -0
RTN3-210ENST00000540798 SAMM50Q9Y512 469 aa15.04■□□□□ -0
RTN3-210ENST00000540798 MAPK13O15264 365 aa15.04■□□□□ -0
RTN3-210ENST00000540798 KCNA2P16389 499 aa15.04■□□□□ -0
RTN3-210ENST00000540798 TCP1P17987 556 aaKnown RBP15.04■□□□□ -0
RTN3-210ENST00000540798 VSNL1P62760 191 aa15.04■□□□□ -0
RTN3-210ENST00000540798 BFSP1Q12934 665 aa15.04■□□□□ -0
RTN3-210ENST00000540798 CBWD6Q4V339 395 aa15.04■□□□□ -0
RTN3-210ENST00000540798 CBWD3Q5JTY5 395 aa15.04■□□□□ -0
RTN3-210ENST00000540798 CBWD5Q5RIA9 395 aa15.04■□□□□ -0
RTN3-210ENST00000540798 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.04■□□□□ -0
RTN3-210ENST00000540798 DRC1Q96MC2 740 aa15.04■□□□□ -0
RTN3-210ENST00000540798 SPAG5Q96R06 1193 aa15.04■□□□□ -0
RTN3-210ENST00000540798 OSBPL9Q96SU4 736 aa15.04■□□□□ -0
RTN3-210ENST00000540798 MOV10L1Q9BXT6 1211 aaKnown RBP15.04■□□□□ -0
RTN3-210ENST00000540798 HYOU1Q9Y4L1 999 aa15.04■□□□□ -0
RTN3-210ENST00000540798 NFASCO94856 1347 aa15.04■□□□□ -0
RTN3-210ENST00000540798 STBD1O95210 358 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms