RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 ITIH3Q06033 890 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 MTMR3Q13615 1198 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 SPOUT1Q5T280 376 aaKnown RBP8.3□□□□□ -1.08
YBX3-209ENST00000540747 ZNF746Q6NUN9 644 aaPredicted RBP8.3□□□□□ -1.08
YBX3-209ENST00000540747 SWSAP1Q6NVH7 229 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 MIS18BP1Q6P0N0 1132 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 ZDHHC14Q8IZN3 488 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 FEZF2Q8TBJ5 459 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 ATOH1Q92858 354 aaPredicted RBP8.3□□□□□ -1.08
YBX3-209ENST00000540747 LENG9Q96B70 501 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 ZNF558Q96NG5 402 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 NECTIN4Q96NY8 510 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 SMOC2Q9H3U7 446 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 SPG21Q9NZD8 308 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 PUF60Q9UHX1 559 aaKnown RBP8.3□□□□□ -1.08
YBX3-209ENST00000540747 BRPF3Q9ULD4 1205 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 IRAK3Q9Y616 596 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 GPR179Q6PRD1 2367 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 EPG5Q9HCE0 2579 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 OTOGLQ3ZCN5 2332 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 DENND4AQ7Z401 1863 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 A0A0U1RQF3 1178 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 ESYT2A0FGR8 921 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 SMCO2A6NFE2 343 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 H0Y858 1186 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 DDX39AO00148 427 aaKnown RBP8.29□□□□□ -1.08
YBX3-209ENST00000540747 DARSP14868 501 aaKnown RBP8.29□□□□□ -1.08
YBX3-209ENST00000540747 IBSPP21815 317 aaPredicted RBP8.29□□□□□ -1.08
YBX3-209ENST00000540747 EIF4BP23588 611 aaKnown RBP8.29□□□□□ -1.08
YBX3-209ENST00000540747 CIITAP33076 1130 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 GPC3P51654 580 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 RCAN1P53805 252 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 SMC1AQ14683 1233 aaKnown RBP8.29□□□□□ -1.08
YBX3-209ENST00000540747 TPRNQ4KMQ1 711 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 KIAA1841Q6NSI8 718 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 LLGL2Q6P1M3 1020 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 TMEM173Q86WV6 379 aaPredicted RBP8.29□□□□□ -1.08
YBX3-209ENST00000540747 PLA2G4DQ86XP0 818 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 SMAP1Q8IYB5 467 aaPredicted RBP8.29□□□□□ -1.08
YBX3-209ENST00000540747 ZNF710Q8N1W2 664 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 SLC22A17Q8WUG5 538 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 CEP89Q96ST8 783 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 PPP1R16BQ96T49 567 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 ESYT1Q9BSJ8 1104 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 TRAIPQ9BWF2 469 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 APOL5Q9BWW9 433 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 ZBP1Q9H171 429 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 GLT8D2Q9H1C3 349 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 ENTPD7Q9NQZ7 604 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 TBC1D22BQ9NU19 505 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 RBM28Q9NW13 759 aaKnown RBP8.29□□□□□ -1.08
YBX3-209ENST00000540747 USTQ9Y2C2 406 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 NR2E1Q9Y466 385 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 V9GY48 417 aaPredicted RBP8.29□□□□□ -1.08
YBX3-209ENST00000540747 DNAH14Q0VDD8 3507 aa8.29□□□□□ -1.08
YBX3-209ENST00000540747 NID2Q14112 1375 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 MAGEB2O15479 319 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 STBD1O95210 358 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 EOMESO95936 686 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 SP100P23497 879 aaPredicted RBP8.28□□□□□ -1.08
YBX3-209ENST00000540747 CDC27P30260 824 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 MTHFRP42898 656 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 NLRP11P59045 1033 aaKnown RBP8.28□□□□□ -1.08
YBX3-209ENST00000540747 SETQ01105 290 aaPredicted RBP8.28□□□□□ -1.08
YBX3-209ENST00000540747 FOXK2Q01167 660 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 KRT17Q04695 432 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 TARBP2Q15633 366 aaKnown RBP8.28□□□□□ -1.08
YBX3-209ENST00000540747 RTN1Q16799 776 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 PFKFB3Q16875 520 aaPredicted RBP8.28□□□□□ -1.08
YBX3-209ENST00000540747 TSGA10IPQ3SY00 556 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 CWF19L1Q69YN2 538 aaKnown RBP8.28□□□□□ -1.08
YBX3-209ENST00000540747 ASTLQ6HA08 431 aaPredicted RBP8.28□□□□□ -1.08
YBX3-209ENST00000540747 TMC7Q7Z402 723 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 BCL7CQ8WUZ0 217 aaPredicted RBP8.28□□□□□ -1.08
YBX3-209ENST00000540747 FAM167AQ96KS9 214 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 VN1R3Q9BXE9 311 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 ZMYND12Q9H0C1 365 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 DZANK1Q9NVP4 752 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 CEP131Q9UPN4 1083 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 PCDHA10Q9Y5I2 948 aa8.28□□□□□ -1.08
YBX3-209ENST00000540747 IGKV6-21A0A0C4DH24 114 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 ZBTB43O43298 467 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 B4GALT3O60512 393 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 OATP04181 439 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 ASGR2P07307 311 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 PSAPP07602 524 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 WEE2P0C1S8 567 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 CTSAP10619 480 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 EPCAMP16422 314 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 NPR3P17342 541 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 CLCN5P51795 746 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 POLGP54098 1239 aaPredicted RBP8.27□□□□□ -1.09
YBX3-209ENST00000540747 BCAR1P56945 870 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 DRP2Q13474 957 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 UGCGQ16739 394 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 JAKMIP3Q5VZ66 844 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 CES5AQ6NT32 575 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 EFCAB12Q6NXP0 572 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 KANK3Q6NY19 840 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 B3GNT9Q6UX72 402 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms