RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 ABI1Q8IZP0 508 aa9.13□□□□□ -0.95
LRP6-204ENST00000540415 SRBD1Q8N5C6 995 aaKnown RBP9.13□□□□□ -0.95
LRP6-204ENST00000540415 SUMF1Q8NBK3 374 aa9.13□□□□□ -0.95
LRP6-204ENST00000540415 RUBCNQ92622 972 aa9.13□□□□□ -0.95
LRP6-204ENST00000540415 ACSF2Q96CM8 615 aaPredicted RBP9.13□□□□□ -0.95
LRP6-204ENST00000540415 RRP36Q96EU6 259 aaKnown RBP9.13□□□□□ -0.95
LRP6-204ENST00000540415 MXRA8Q9BRK3 442 aa9.13□□□□□ -0.95
LRP6-204ENST00000540415 SEMA4AQ9H3S1 761 aa9.13□□□□□ -0.95
LRP6-204ENST00000540415 DLGAP2Q9P1A6 1054 aa9.13□□□□□ -0.95
LRP6-204ENST00000540415 ZBTB47Q9UFB7 747 aaPredicted RBP9.13□□□□□ -0.95
LRP6-204ENST00000540415 PCDHA6Q9UN73 950 aa9.13□□□□□ -0.95
LRP6-204ENST00000540415 PCDHA8Q9Y5H6 950 aa9.13□□□□□ -0.95
LRP6-204ENST00000540415 IGKV6D-21A0A0A0MT36 114 aa9.12□□□□□ -0.95
LRP6-204ENST00000540415 MEIS3P2A8K0S8 358 aa9.12□□□□□ -0.95
LRP6-204ENST00000540415 BACH1O14867 736 aa9.12□□□□□ -0.95
LRP6-204ENST00000540415 ZC3H11AO75152 810 aaKnown RBP eCLIP9.12□□□□□ -0.95
LRP6-204ENST00000540415 CSDE1O75534 798 aaKnown RBP9.12□□□□□ -0.95
LRP6-204ENST00000540415 ATG7O95352 703 aa9.12□□□□□ -0.95
LRP6-204ENST00000540415 CYP21A2P08686 494 aa9.12□□□□□ -0.95
LRP6-204ENST00000540415 RXRAP19793 462 aa9.12□□□□□ -0.95
LRP6-204ENST00000540415 ATXN1P54253 815 aaKnown RBP9.12□□□□□ -0.95
LRP6-204ENST00000540415 COL9A3Q14050 684 aaPredicted RBP9.12□□□□□ -0.95
LRP6-204ENST00000540415 PTPN14Q15678 1187 aa9.12□□□□□ -0.95
LRP6-204ENST00000540415 ABHD15Q6UXT9 468 aa9.12□□□□□ -0.95
LRP6-204ENST00000540415 ZNF598Q86UK7 904 aaKnown RBP9.12□□□□□ -0.95
LRP6-204ENST00000540415 TICAM2Q86XR7 235 aa9.12□□□□□ -0.95
LRP6-204ENST00000540415 METTL13Q8N6R0 699 aa9.12□□□□□ -0.95
LRP6-204ENST00000540415 LPPQ93052 612 aa9.12□□□□□ -0.95
LRP6-204ENST00000540415 TMEM169Q96HH4 297 aa9.12□□□□□ -0.95
LRP6-204ENST00000540415 MYADMQ96S97 322 aa9.12□□□□□ -0.95
LRP6-204ENST00000540415 SPZ1Q9BXG8 430 aa9.12□□□□□ -0.95
LRP6-204ENST00000540415 FOXQ1Q9C009 403 aa9.12□□□□□ -0.95
LRP6-204ENST00000540415 ADAMTS10Q9H324 1103 aa9.12□□□□□ -0.95
LRP6-204ENST00000540415 AGO4Q9HCK5 861 aaKnown RBP9.12□□□□□ -0.95
LRP6-204ENST00000540415 MAP1BP46821 2468 aaKnown RBP9.11□□□□□ -0.95
LRP6-204ENST00000540415 NFASCO94856 1347 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 COL4A3Q01955 1670 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 DCDC2BA2VCK2 349 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 SPDYE3A6NKU9 549 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 HOXA2O43364 376 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 HBP1O60381 514 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 SSBP05455 408 aaKnown RBP eCLIP9.11□□□□□ -0.95
LRP6-204ENST00000540415 CTSAP10619 480 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 RFX1P22670 979 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 CLCN4P51793 760 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 NLRP11P59045 1033 aaKnown RBP9.11□□□□□ -0.95
LRP6-204ENST00000540415 PTH1RQ03431 593 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 LETM2Q2VYF4 491 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 ZNF484Q5JVG2 852 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 B4GALNT3Q6L9W6 998 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 SWSAP1Q6NVH7 229 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 PDXDC2PQ6P474 469 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 CATIPQ7Z7H3 387 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 C1orf210Q8IVY1 113 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 PLEKHM2Q8IWE5 1019 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 SLC44A3Q8N4M1 653 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 LRRC71Q8N4P6 559 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 TMEM87AQ8NBN3 555 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 GPR152Q8TDT2 470 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 IGDCC4Q8TDY8 1250 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 IGSF21Q96ID5 467 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 SDF4Q9BRK5 362 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 SFXN1Q9H9B4 322 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 RNF216Q9NWF9 866 aaPredicted RBP9.11□□□□□ -0.95
LRP6-204ENST00000540415 WNT16Q9UBV4 365 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 LOXHD1Q8IVV2 1947 aa9.11□□□□□ -0.95
LRP6-204ENST00000540415 KAT6AQ92794 2004 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 SPDYE4A6NLX3 237 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 MAFGO15525 162 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 CNPP09543 421 aaKnown RBP9.1□□□□□ -0.95
LRP6-204ENST00000540415 ZSCAN20P17040 1043 aaPredicted RBP9.1□□□□□ -0.95
LRP6-204ENST00000540415 GBP2P32456 591 aaPredicted RBP9.1□□□□□ -0.95
LRP6-204ENST00000540415 ALDH7A1P49419 539 aaKnown RBP9.1□□□□□ -0.95
LRP6-204ENST00000540415 TBC1D8BQ0IIM8 1120 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 ST3GAL2Q16842 350 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 ODR4Q5SWX8 454 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 TYW1BQ6NUM6 668 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 DDX53Q86TM3 631 aaKnown RBP9.1□□□□□ -0.95
LRP6-204ENST00000540415 ZNF654Q8IZM8 581 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 CCDC82Q8N4S0 544 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 TNPO1Q92973 898 aaKnown RBP9.1□□□□□ -0.95
LRP6-204ENST00000540415 KLHL5Q96PQ7 755 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 GBP3Q9H0R5 595 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 NRDE2Q9H7Z3 1164 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 ZNF302Q9NR11 478 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 IGSF9Q9P2J2 1179 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 DNAJB4Q9UDY4 337 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 SEC63Q9UGP8 760 aaKnown RBP9.1□□□□□ -0.95
LRP6-204ENST00000540415 AKT3Q9Y243 479 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 IRAK3Q9Y616 596 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 COL1A2P08123 1366 aa9.1□□□□□ -0.95
LRP6-204ENST00000540415 DENND4AQ7Z401 1863 aa9.09□□□□□ -0.95
LRP6-204ENST00000540415 A0A0U1RQF3 1178 aa9.09□□□□□ -0.95
LRP6-204ENST00000540415 ERICH2A1L162 156 aa9.09□□□□□ -0.95
LRP6-204ENST00000540415 E7EWF7 191 aa9.09□□□□□ -0.95
LRP6-204ENST00000540415 DHX15O43143 795 aaKnown RBP9.09□□□□□ -0.95
LRP6-204ENST00000540415 RFPL2O75678 378 aa9.09□□□□□ -0.95
LRP6-204ENST00000540415 GALTP07902 379 aa9.09□□□□□ -0.95
LRP6-204ENST00000540415 EIF4BP23588 611 aaKnown RBP9.09□□□□□ -0.95
LRP6-204ENST00000540415 KLRC2P26717 231 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms