RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 CHURC1Q8WUH1 139 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 TEKT4Q8WW24 435 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 CDK5RAP3Q96JB5 506 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 LACRTQ9GZZ8 138 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 KDM4CQ9H3R0 1056 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 RBM12Q9NTZ6 932 aaKnown RBP9.41□□□□□ -0.9
DDB1-217ENST00000540166 PTPN22Q9Y2R2 807 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 PCDHA13Q9Y5I0 950 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 FLT1P17948 1338 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 BICDL2A1A5D9 508 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 NCK2O43639 380 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 SUN1O94901 812 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 MYBL1P10243 752 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 TOB1P50616 345 aaPredicted RBP9.41□□□□□ -0.9
DDB1-217ENST00000540166 ARID5AQ03989 594 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 COG2Q14746 738 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 NECAB2Q7Z6G3 386 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 ZFPM1Q8IX07 1006 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 RETREG2Q8NC44 543 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 PROCA1Q8NCQ7 364 aaPredicted RBP9.41□□□□□ -0.9
DDB1-217ENST00000540166 OR2W6PQ8NHA6 318 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 TUBGCP2Q9BSJ2 902 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 RPAP3Q9H6T3 665 aaPredicted RBP9.41□□□□□ -0.9
DDB1-217ENST00000540166 DUSP10Q9Y6W6 482 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 AHCYL1O43865 530 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 FGFR1OPO95684 399 aaKnown RBP9.41□□□□□ -0.9
DDB1-217ENST00000540166 MMEP08473 750 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 EEF1GP26641 437 aaKnown RBP9.41□□□□□ -0.9
DDB1-217ENST00000540166 EHHADHQ08426 723 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 NSMFQ6X4W1 530 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 RRAGAQ7L523 313 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 MFN1Q8IWA4 741 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 LCORLQ8N3X6 602 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 VGLL2Q8N8G2 317 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 MAB21L3Q8N8X9 362 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 FAM163AQ96GL9 167 aaPredicted RBP9.41□□□□□ -0.9
DDB1-217ENST00000540166 PLCB1Q9NQ66 1216 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 LGALS16A8MUM7 142 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 DNM1LO00429 736 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 DYNC1I2Q13409 638 aaKnown RBP9.4□□□□□ -0.9
DDB1-217ENST00000540166 RPS6KA1Q15418 735 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 NTRK3Q16288 839 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 C11orf91Q3C1V1 193 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 ARMC3Q5W041 872 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 CRELD2Q6UXH1 353 aaPredicted RBP9.4□□□□□ -0.9
DDB1-217ENST00000540166 DTHD1Q6ZMT9 781 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 ELOA2Q8IYF1 753 aaPredicted RBP9.4□□□□□ -0.9
DDB1-217ENST00000540166 PPFIBP2Q8ND30 876 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 ASCC2Q9H1I8 757 aaPredicted RBP9.4□□□□□ -0.9
DDB1-217ENST00000540166 KCNK9Q9NPC2 374 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 TCP11L1Q9NUJ3 509 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 RGL1Q9NZL6 768 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 EHD2Q9NZN4 543 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 SCOCQ9UIL1 159 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 CORO1CQ9ULV4 474 aaPredicted RBP9.4□□□□□ -0.9
DDB1-217ENST00000540166 UTP11Q9Y3A2 253 aaKnown RBP9.4□□□□□ -0.9
DDB1-217ENST00000540166 ANKRD31Q8N7Z5 1873 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 STK36Q9NRP7 1315 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 WDR90Q96KV7 1748 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 KCNK3O14649 394 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 ACTN4O43707 911 aaKnown RBP9.4□□□□□ -0.9
DDB1-217ENST00000540166 DNAJC8O75937 253 aaPredicted RBP9.4□□□□□ -0.9
DDB1-217ENST00000540166 FCER1AP12319 257 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 ELNP15502 786 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 ASIC1P78348 528 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 XRCC4Q13426 336 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 TEX9Q8N6V9 391 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 SOCS4Q8WXH5 440 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 RAPGEF5Q92565 580 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 RNF26Q9BY78 433 aaPredicted RBP9.4□□□□□ -0.9
DDB1-217ENST00000540166 OSBPL7Q9BZF2 842 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 CAPN11Q9UMQ6 739 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 ADAMTS7Q9UKP4 1686 aa9.4□□□□□ -0.9
DDB1-217ENST00000540166 COL1A1P02452 1464 aaPredicted RBP9.4□□□□□ -0.9
DDB1-217ENST00000540166 ZNF233A6NK53 670 aa9.4□□□□□ -0.91
DDB1-217ENST00000540166 PFDN1O60925 122 aa9.4□□□□□ -0.91
DDB1-217ENST00000540166 GHRP10912 638 aa9.4□□□□□ -0.91
DDB1-217ENST00000540166 HERVK_113P62684 666 aa9.4□□□□□ -0.91
DDB1-217ENST00000540166 KIAA0753Q2KHM9 967 aa9.4□□□□□ -0.91
DDB1-217ENST00000540166 HAUS3Q68CZ6 603 aa9.4□□□□□ -0.91
DDB1-217ENST00000540166 ZNF365Q70YC5 407 aa9.4□□□□□ -0.91
DDB1-217ENST00000540166 GBP7Q8N8V2 638 aaPredicted RBP9.4□□□□□ -0.91
DDB1-217ENST00000540166 MGARPQ8TDB4 240 aa9.4□□□□□ -0.91
DDB1-217ENST00000540166 VCX3BQ9H321 246 aa9.4□□□□□ -0.91
DDB1-217ENST00000540166 VCX3AQ9NNX9 186 aa9.4□□□□□ -0.91
DDB1-217ENST00000540166 GDAQ9Y2T3 454 aa9.4□□□□□ -0.91
DDB1-217ENST00000540166 GTPBP6O43824 516 aaPredicted RBP9.39□□□□□ -0.91
DDB1-217ENST00000540166 RPN1P04843 607 aaKnown RBP9.39□□□□□ -0.91
DDB1-217ENST00000540166 CALM1P0DP23 149 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 CALM2P0DP24 149 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 CALM3P0DP25 149 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 CD44P16070 742 aaKnown RBP9.39□□□□□ -0.91
DDB1-217ENST00000540166 KIF11P52732 1056 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 DHX9Q08211 1270 aaKnown RBP9.39□□□□□ -0.91
DDB1-217ENST00000540166 CUL4BQ13620 913 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 CDKAL1Q5VV42 579 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 CEP128Q6ZU80 1094 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 MS4A14Q96JA4 679 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 ECT2Q9H8V3 914 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 SLC39A2Q9NP94 309 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms