RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 GABBR1Q9UBS5 961 aa22.61■■□□□ 1.21
LPCAT3-210ENST00000540090 GOLGA8AA7E2F4 631 aa22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 GOLGA8BA8MQT2 603 aa22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 GFRA3O60609 400 aa22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 TMOD1P28289 359 aa22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 PFKFB3Q16875 520 aaPredicted RBP22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 TPRNQ4KMQ1 711 aa22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 MCTP2Q6DN12 878 aa22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 ZBTB33Q86T24 672 aa22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 KREMEN2Q8NCW0 462 aa22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 ATOH1Q92858 354 aaPredicted RBP22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 FAM167AQ96KS9 214 aa22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 SNX27Q96L92 541 aa22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 NECTIN4Q96NY8 510 aa22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 MAP7D2Q96T17 732 aa22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 ZMYND12Q9H0C1 365 aa22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 AKT3Q9Y243 479 aa22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 HCFC2Q9Y5Z7 792 aa22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 CFAP54Q96N23 3096 aa22.6■■□□□ 1.21
LPCAT3-210ENST00000540090 A0A0U1RQF3 1178 aa22.59■■□□□ 1.21
LPCAT3-210ENST00000540090 ESYT2A0FGR8 921 aa22.59■■□□□ 1.21
LPCAT3-210ENST00000540090 C2orf71A6NGG8 1288 aa22.59■■□□□ 1.21
LPCAT3-210ENST00000540090 ADAMTS3O15072 1205 aa22.59■■□□□ 1.21
LPCAT3-210ENST00000540090 EOMESO95936 686 aa22.59■■□□□ 1.21
LPCAT3-210ENST00000540090 PDGFBP01127 241 aaPredicted RBP22.59■■□□□ 1.21
LPCAT3-210ENST00000540090 SP100P23497 879 aaPredicted RBP22.59■■□□□ 1.21
LPCAT3-210ENST00000540090 RCAN1P53805 252 aa22.59■■□□□ 1.21
LPCAT3-210ENST00000540090 ITIH3Q06033 890 aa22.59■■□□□ 1.21
LPCAT3-210ENST00000540090 SMC1AQ14683 1233 aaKnown RBP22.59■■□□□ 1.21
LPCAT3-210ENST00000540090 TSGA10IPQ3SY00 556 aa22.59■■□□□ 1.21
LPCAT3-210ENST00000540090 CLLU1OSQ5K130 101 aa22.59■■□□□ 1.21
LPCAT3-210ENST00000540090 UBALD2Q8IYN6 164 aa22.59■■□□□ 1.21
LPCAT3-210ENST00000540090 SLC39A11Q8N1S5 342 aa22.59■■□□□ 1.21
LPCAT3-210ENST00000540090 CDH22Q9UJ99 828 aa22.59■■□□□ 1.21
LPCAT3-210ENST00000540090 KMT2EQ8IZD2 1858 aa22.58■■□□□ 1.21
LPCAT3-210ENST00000540090 KLF18A0A0U1RQI7 1052 aa22.58■■□□□ 1.21
LPCAT3-210ENST00000540090 CIITAP33076 1130 aa22.58■■□□□ 1.21
LPCAT3-210ENST00000540090 ADD1P35611 737 aaKnown RBP22.58■■□□□ 1.21
LPCAT3-210ENST00000540090 CES5AQ6NT32 575 aa22.58■■□□□ 1.21
LPCAT3-210ENST00000540090 ZNF598Q86UK7 904 aaKnown RBP22.58■■□□□ 1.21
LPCAT3-210ENST00000540090 LRRC71Q8N4P6 559 aa22.58■■□□□ 1.21
LPCAT3-210ENST00000540090 POMKQ9H5K3 350 aa22.58■■□□□ 1.21
LPCAT3-210ENST00000540090 NRBP2Q9NSY0 501 aa22.58■■□□□ 1.21
LPCAT3-210ENST00000540090 SORCS3Q9UPU3 1222 aa22.58■■□□□ 1.21
LPCAT3-210ENST00000540090 ZFHX2Q9C0A1 2572 aaPredicted RBP22.58■■□□□ 1.21
LPCAT3-210ENST00000540090 MYO15AQ9UKN7 3530 aa22.57■■□□□ 1.2
LPCAT3-210ENST00000540090 CLASP2O75122 1294 aaKnown RBP22.57■■□□□ 1.2
LPCAT3-210ENST00000540090 DARSP14868 501 aaKnown RBP22.57■■□□□ 1.2
LPCAT3-210ENST00000540090 GPC3P51654 580 aa22.57■■□□□ 1.2
LPCAT3-210ENST00000540090 PRR16Q569H4 304 aa22.57■■□□□ 1.2
LPCAT3-210ENST00000540090 RASEFQ8IZ41 740 aa22.57■■□□□ 1.2
LPCAT3-210ENST00000540090 RNF169Q8NCN4 708 aa22.57■■□□□ 1.2
LPCAT3-210ENST00000540090 C6orf50Q9HD87 102 aa22.57■■□□□ 1.2
LPCAT3-210ENST00000540090 TSHZ2Q9NRE2 1034 aa22.57■■□□□ 1.2
LPCAT3-210ENST00000540090 TCEAL9Q9UHQ7 104 aa22.57■■□□□ 1.2
LPCAT3-210ENST00000540090 SAMM50Q9Y512 469 aa22.57■■□□□ 1.2
LPCAT3-210ENST00000540090 WDR64B1ANS9 1081 aa22.56■■□□□ 1.2
LPCAT3-210ENST00000540090 C2CD4DB7Z1M9 353 aa22.56■■□□□ 1.2
LPCAT3-210ENST00000540090 H0Y858 1186 aa22.56■■□□□ 1.2
LPCAT3-210ENST00000540090 GALR2O43603 387 aaPredicted RBP22.56■■□□□ 1.2
LPCAT3-210ENST00000540090 ZNF862O60290 1169 aa22.56■■□□□ 1.2
LPCAT3-210ENST00000540090 MTMR3Q13615 1198 aa22.56■■□□□ 1.2
LPCAT3-210ENST00000540090 ADCK5Q3MIX3 580 aa22.56■■□□□ 1.2
LPCAT3-210ENST00000540090 REXO1Q8N1G1 1221 aaKnown RBP22.56■■□□□ 1.2
LPCAT3-210ENST00000540090 LENG9Q96B70 501 aa22.56■■□□□ 1.2
LPCAT3-210ENST00000540090 ZNF668Q96K58 619 aaPredicted RBP22.56■■□□□ 1.2
LPCAT3-210ENST00000540090 PROB1E7EW31 1015 aa22.55■■□□□ 1.2
LPCAT3-210ENST00000540090 BRD1O95696 1058 aa22.55■■□□□ 1.2
LPCAT3-210ENST00000540090 CXCL14O95715 111 aa22.55■■□□□ 1.2
LPCAT3-210ENST00000540090 OATP04181 439 aa22.55■■□□□ 1.2
LPCAT3-210ENST00000540090 MTHFRP42898 656 aa22.55■■□□□ 1.2
LPCAT3-210ENST00000540090 ALDH7A1P49419 539 aaKnown RBP22.55■■□□□ 1.2
LPCAT3-210ENST00000540090 BMS1Q14692 1282 aaKnown RBP22.55■■□□□ 1.2
LPCAT3-210ENST00000540090 HELQQ8TDG4 1101 aa22.55■■□□□ 1.2
LPCAT3-210ENST00000540090 CCDC12Q8WUD4 166 aaPredicted RBP22.55■■□□□ 1.2
LPCAT3-210ENST00000540090 MRPL9Q9BYD2 267 aaKnown RBP22.55■■□□□ 1.2
LPCAT3-210ENST00000540090 DISC1Q9NRI5 854 aa22.55■■□□□ 1.2
LPCAT3-210ENST00000540090 DACT1Q9NYF0 836 aa22.55■■□□□ 1.2
LPCAT3-210ENST00000540090 CCDC196A0A1B0GTZ2 297 aa22.54■■□□□ 1.2
LPCAT3-210ENST00000540090 GNA11P29992 359 aa22.54■■□□□ 1.2
LPCAT3-210ENST00000540090 BCAR1P56945 870 aa22.54■■□□□ 1.2
LPCAT3-210ENST00000540090 PTPRZ1P23471 2315 aaPredicted RBP22.54■■□□□ 1.2
LPCAT3-210ENST00000540090 NT5C1B-RDH14C9J2C7 533 aa22.53■■□□□ 1.2
LPCAT3-210ENST00000540090 EDIL3O43854 480 aa22.53■■□□□ 1.2
LPCAT3-210ENST00000540090 FGFR4P22455 802 aa22.53■■□□□ 1.2
LPCAT3-210ENST00000540090 METAP2P50579 478 aaKnown RBP eCLIP22.53■■□□□ 1.2
LPCAT3-210ENST00000540090 PRKCEQ02156 737 aa22.53■■□□□ 1.2
LPCAT3-210ENST00000540090 ZDHHC14Q8IZN3 488 aa22.53■■□□□ 1.2
LPCAT3-210ENST00000540090 TMEM169Q96HH4 297 aa22.53■■□□□ 1.2
LPCAT3-210ENST00000540090 CHST12Q9NRB3 414 aa22.53■■□□□ 1.2
LPCAT3-210ENST00000540090 IRAK3Q9Y616 596 aa22.53■■□□□ 1.2
LPCAT3-210ENST00000540090 PRPF3O43395 683 aaKnown RBP22.52■■□□□ 1.2
LPCAT3-210ENST00000540090 HMGB1P09429 215 aaKnown RBP22.52■■□□□ 1.2
LPCAT3-210ENST00000540090 CDC42EP1Q00587 391 aa22.52■■□□□ 1.2
LPCAT3-210ENST00000540090 KRT32Q14532 448 aa22.52■■□□□ 1.2
LPCAT3-210ENST00000540090 TARBP2Q15633 366 aaKnown RBP22.52■■□□□ 1.2
LPCAT3-210ENST00000540090 ATAT1Q5SQI0 421 aa22.52■■□□□ 1.2
LPCAT3-210ENST00000540090 VPS52Q8N1B4 723 aa22.52■■□□□ 1.2
LPCAT3-210ENST00000540090 TMEM105Q8N8V8 129 aa22.52■■□□□ 1.2
LPCAT3-210ENST00000540090 NLRP7Q8WX94 980 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms