RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 RSPH3Q86UC2 560 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 CABP7Q86V35 215 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 METTL13Q8N6R0 699 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 RETREG2Q8NC44 543 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 KCNG4Q8TDN1 519 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 LRRC15Q8TF66 581 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 SLC7A3Q8WY07 619 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 SYMPKQ92797 1274 aaKnown RBP7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 EPSTI1Q96J88 318 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 CCDC43Q96MW1 224 aaKnown RBP7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 CLIC6Q96NY7 704 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 PNMA5Q96PV4 448 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 NACC1Q96RE7 527 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 JPH2Q9BR39 696 aaPredicted RBP7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 OSBPL7Q9BZF2 842 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 NT5C3AQ9H0P0 336 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 IL23AQ9NPF7 189 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 XPNPEP1Q9NQW7 623 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 CFAP45Q9UL16 551 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 KIAA1024Q9UPX6 916 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 ATP6V1DQ9Y5K8 247 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 CDY2AQ9Y6F7 541 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 CHD9Q3L8U1 2897 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 KIAA1671Q9BY89 1806 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 CHD7Q9P2D1 2997 aa7.77□□□□□ -1.16
LPCAT3-209ENST00000540060 NLRC5Q86WI3 1866 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 E9PMD0 336 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 USO1O60763 962 aaKnown RBP7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 DGAT1O75907 488 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 EYA4O95677 639 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 VTNP04004 478 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 PFKMP08237 780 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 TMOD1P28289 359 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 UBA7P41226 1012 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 KRT85P78386 507 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 TMEM62Q0P6H9 643 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 KARSQ15046 597 aaKnown RBP7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 SPECC1Q5M775 1068 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 FBXO47Q5MNV8 452 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 AXDND1Q5T1B0 1012 aaPredicted RBP7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 IER5Q5VY09 327 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 PSRC1Q6PGN9 363 aaPredicted RBP7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 C16orf59Q7L2K0 433 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 DEFB128Q7Z7B8 93 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 EXOC8Q8IYI6 725 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 NME8Q8N427 588 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 KCTD17Q8N5Z5 321 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 LEO1Q8WVC0 666 aaPredicted RBP7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 MAP7D2Q96T17 732 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 MTRQ99707 1265 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.77□□□□□ -1.177e-6■□□□□ 9.4
LPCAT3-209ENST00000540060 UBE2OQ9C0C9 1292 aaKnown RBP7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 CCSER1Q9C0I3 900 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 BHMT2Q9H2M3 363 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 SUGCTQ9HAC7 445 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 ATP6V0A4Q9HBG4 840 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 RCOR1Q9UKL0 485 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 AKT3Q9Y243 479 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 TRPV2Q9Y5S1 764 aa7.77□□□□□ -1.17
LPCAT3-209ENST00000540060 COL4A6Q14031 1691 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 A0A087X0B3 334 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 ARHGEF35A5YM69 484 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 M0QZ92 97 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 CUTAO60888 179 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 GPR32O75388 356 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 ACRP10323 421 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 GHRP10912 638 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 PLCG1P19174 1290 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 NCLP19338 710 aaKnown RBP7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 DNM2P50570 870 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 GPC3P51654 580 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 LPIN1Q14693 890 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 ZRSR1Q15695 479 aaKnown RBP7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 KIZQ2M2Z5 673 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 TCTN1Q2MV58 587 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 PLEKHG4Q58EX7 1191 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 TMEM240Q5SV17 173 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 C9orf50Q5SZB4 431 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 RASIP1Q5U651 963 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 CNKSR3Q6P9H4 555 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 SHC4Q6S5L8 630 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 PADI6Q6TGC4 694 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 TSHZ1Q6ZSZ6 1077 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 RPUSD2Q8IZ73 545 aaKnown RBP7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 TDHQ8IZJ6 230 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 MCPH1Q8NEM0 835 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 TMEM40Q8WWA1 233 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 TCP11Q8WWU5 503 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 TMEM143Q96AN5 459 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 CALML4Q96GE6 196 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 CDK5RAP3Q96JB5 506 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 SPATA32Q96LK8 384 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 PPP1R16BQ96T49 567 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 PLIN2Q99541 437 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 OSMRQ99650 979 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 CELF4Q9BZC1 486 aaKnown RBP7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 ADAMTS10Q9H324 1103 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 CDHR5Q9HBB8 845 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 BLOC1S4Q9NUP1 217 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 PCDHA7Q9UN72 937 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms