RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 SENP6Q9GZR1 1112 aaPredicted RBP20.96■□□□□ 0.95
TNFRSF1A-213ENST00000540022 ZHX3Q9H4I2 956 aa20.96■□□□□ 0.95
TNFRSF1A-213ENST00000540022 TBCAO75347 108 aaKnown RBP20.95■□□□□ 0.94
TNFRSF1A-213ENST00000540022 RHOBTB3O94955 611 aa20.95■□□□□ 0.94
TNFRSF1A-213ENST00000540022 FAM13AO94988 1023 aa20.95■□□□□ 0.94
TNFRSF1A-213ENST00000540022 MKRN4PQ13434 485 aaPredicted RBP20.95■□□□□ 0.94
TNFRSF1A-213ENST00000540022 DRP2Q13474 957 aa20.95■□□□□ 0.94
TNFRSF1A-213ENST00000540022 LRRC71Q8N4P6 559 aa20.95■□□□□ 0.94
TNFRSF1A-213ENST00000540022 HPS3Q969F9 1004 aa20.95■□□□□ 0.94
TNFRSF1A-213ENST00000540022 TMEM143Q96AN5 459 aa20.95■□□□□ 0.94
TNFRSF1A-213ENST00000540022 SUGCTQ9HAC7 445 aa20.95■□□□□ 0.94
TNFRSF1A-213ENST00000540022 COL4A3BPQ9Y5P4 624 aa20.95■□□□□ 0.94
TNFRSF1A-213ENST00000540022 NR2E3Q9Y5X4 410 aa20.95■□□□□ 0.94
TNFRSF1A-213ENST00000540022 MYH9P35579 1960 aaKnown RBP20.95■□□□□ 0.94
TNFRSF1A-213ENST00000540022 C17orf102A2RUQ5 167 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 MAGEB2O15479 319 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 BMP6P22004 513 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 ZNF200P98182 395 aaPredicted RBP20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 ITGA7Q13683 1181 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 EFCAB12Q6NXP0 572 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 SFR1Q86XK3 245 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 EXOC8Q8IYI6 725 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 LINC01465Q8N7H1 131 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 DRC1Q96MC2 740 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 JPH2Q9BR39 696 aaPredicted RBP20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 POLR3FQ9H1D9 316 aaPredicted RBP20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 PARVGQ9HBI0 331 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 EXOC1Q9NV70 894 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 RMND1Q9NWS8 449 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 GTF2IRD1Q9UHL9 959 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 MBLAC1A4D2B0 266 aaPredicted RBP20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 CLCN3P51790 818 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 ATN1P54259 1190 aaPredicted RBP20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 MORC3Q14149 939 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 HERC4Q5GLZ8 1057 aaPredicted RBP20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 FAM47CQ5HY64 1035 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 NFRKBQ6P4R8 1299 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 SASS6Q6UVJ0 657 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 METTL13Q8N6R0 699 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 KIFAP3Q92845 792 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 CCDC47Q96A33 483 aaKnown RBP20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 FUCA2Q9BTY2 467 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 STARD7Q9NQZ5 370 aa20.94■□□□□ 0.94
TNFRSF1A-213ENST00000540022 TREHO43280 583 aa20.93■□□□□ 0.94
TNFRSF1A-213ENST00000540022 GAS2O43903 313 aaKnown RBP20.93■□□□□ 0.94
TNFRSF1A-213ENST00000540022 ARL2P36404 184 aa20.93■□□□□ 0.94
TNFRSF1A-213ENST00000540022 IER5Q5VY09 327 aa20.93■□□□□ 0.94
TNFRSF1A-213ENST00000540022 GDF6Q6KF10 455 aaPredicted RBP20.93■□□□□ 0.94
TNFRSF1A-213ENST00000540022 SESTD1Q86VW0 696 aa20.93■□□□□ 0.94
TNFRSF1A-213ENST00000540022 MYCT1Q8N699 235 aa20.93■□□□□ 0.94
TNFRSF1A-213ENST00000540022 TRIML1Q8N9V2 468 aa20.93■□□□□ 0.94
TNFRSF1A-213ENST00000540022 RETREG2Q8NC44 543 aa20.93■□□□□ 0.94
TNFRSF1A-213ENST00000540022 BSNDQ8WZ55 320 aa20.93■□□□□ 0.94
TNFRSF1A-213ENST00000540022 TBC1D7Q9P0N9 293 aa20.93■□□□□ 0.94
TNFRSF1A-213ENST00000540022 COLQQ9Y215 455 aaPredicted RBP20.93■□□□□ 0.94
TNFRSF1A-213ENST00000540022 ARID2Q68CP9 1835 aa20.92■□□□□ 0.94
TNFRSF1A-213ENST00000540022 GNAT1P11488 350 aa20.92■□□□□ 0.94
TNFRSF1A-213ENST00000540022 PLS3P13797 630 aa20.92■□□□□ 0.94
TNFRSF1A-213ENST00000540022 GAP43P17677 238 aa20.92■□□□□ 0.94
TNFRSF1A-213ENST00000540022 STK4Q13043 487 aa20.92■□□□□ 0.94
TNFRSF1A-213ENST00000540022 FAM26FQ5R3K3 315 aa20.92■□□□□ 0.94
TNFRSF1A-213ENST00000540022 ODR4Q5SWX8 454 aa20.92■□□□□ 0.94
TNFRSF1A-213ENST00000540022 ASAP3Q8TDY4 903 aa20.92■□□□□ 0.94
TNFRSF1A-213ENST00000540022 FIZ1Q96SL8 496 aa20.92■□□□□ 0.94
TNFRSF1A-213ENST00000540022 FGFBP2Q9BYJ0 223 aa20.92■□□□□ 0.94
TNFRSF1A-213ENST00000540022 SLC39A2Q9NP94 309 aa20.92■□□□□ 0.94
TNFRSF1A-213ENST00000540022 LARSQ9P2J5 1176 aaKnown RBP20.92■□□□□ 0.94
TNFRSF1A-213ENST00000540022 GDAQ9Y2T3 454 aa20.92■□□□□ 0.94
TNFRSF1A-213ENST00000540022 PCDHA2Q9Y5H9 948 aa20.92■□□□□ 0.94
TNFRSF1A-213ENST00000540022 SCN10AQ9Y5Y9 1956 aa20.91■□□□□ 0.94
TNFRSF1A-213ENST00000540022 GLRA2P23416 452 aa20.91■□□□□ 0.94
TNFRSF1A-213ENST00000540022 PEX3P56589 373 aa20.91■□□□□ 0.94
TNFRSF1A-213ENST00000540022 RTP1P59025 263 aa20.91■□□□□ 0.94
TNFRSF1A-213ENST00000540022 NLRP12P59046 1061 aa20.91■□□□□ 0.94
TNFRSF1A-213ENST00000540022 TYRO3Q06418 890 aa20.91■□□□□ 0.94
TNFRSF1A-213ENST00000540022 LRRC26Q2I0M4 334 aa20.91■□□□□ 0.94
TNFRSF1A-213ENST00000540022 ZNF658Q5TYW1 1059 aaPredicted RBP20.91■□□□□ 0.94
TNFRSF1A-213ENST00000540022 SMYD4Q8IYR2 804 aaPredicted RBP20.91■□□□□ 0.94
TNFRSF1A-213ENST00000540022 C7orf61Q8IZ16 206 aa20.91■□□□□ 0.94
TNFRSF1A-213ENST00000540022 SLC43A3Q8NBI5 491 aa20.91■□□□□ 0.94
TNFRSF1A-213ENST00000540022 GLIS3Q8NEA6 775 aa20.91■□□□□ 0.94
TNFRSF1A-213ENST00000540022 TCP11Q8WWU5 503 aa20.91■□□□□ 0.94
TNFRSF1A-213ENST00000540022 OLFML3Q9NRN5 406 aa20.91■□□□□ 0.94
TNFRSF1A-213ENST00000540022 SUCLA2Q9P2R7 463 aaPredicted RBP20.91■□□□□ 0.94
TNFRSF1A-213ENST00000540022 LOXHD1Q8IVV2 1947 aa20.91■□□□□ 0.94
TNFRSF1A-213ENST00000540022 A0A0U1RQG5 324 aaPredicted RBP20.9■□□□□ 0.94
TNFRSF1A-213ENST00000540022 CYP2C9P11712 490 aa20.9■□□□□ 0.94
TNFRSF1A-213ENST00000540022 DNM2P50570 870 aa20.9■□□□□ 0.94
TNFRSF1A-213ENST00000540022 ZNF445P59923 1031 aa20.9■□□□□ 0.94
TNFRSF1A-213ENST00000540022 PSMD2Q13200 908 aa20.9■□□□□ 0.94
TNFRSF1A-213ENST00000540022 DPCR1Q3MIW9 517 aa20.9■□□□□ 0.94
TNFRSF1A-213ENST00000540022 HABP4Q5JVS0 413 aaKnown RBP20.9■□□□□ 0.94
TNFRSF1A-213ENST00000540022 CHRDL2Q6WN34 429 aa20.9■□□□□ 0.94
TNFRSF1A-213ENST00000540022 SLC39A5Q6ZMH5 540 aa20.9■□□□□ 0.94
TNFRSF1A-213ENST00000540022 RUFY4Q6ZNE9 571 aa20.9■□□□□ 0.94
TNFRSF1A-213ENST00000540022 KIAA0895Q8NCT3 520 aa20.9■□□□□ 0.94
TNFRSF1A-213ENST00000540022 PRPF31Q8WWY3 499 aaKnown RBP20.9■□□□□ 0.94
TNFRSF1A-213ENST00000540022 PSPC1Q8WXF1 523 aaKnown RBP20.9■□□□□ 0.94
TNFRSF1A-213ENST00000540022 C17orf75Q9HAS0 396 aa20.9■□□□□ 0.94
TNFRSF1A-213ENST00000540022 SEL1LQ9UBV2 794 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms