RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 PLA2G4FQ68DD2 849 aa12.1□□□□□ -0.47
SLC3A2-215ENST00000539891 NPAS4Q8IUM7 802 aa12.1□□□□□ -0.47
SLC3A2-215ENST00000539891 TPH2Q8IWU9 490 aa12.1□□□□□ -0.47
SLC3A2-215ENST00000539891 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
SLC3A2-215ENST00000539891 SLC7A3Q8WY07 619 aa12.1□□□□□ -0.47
SLC3A2-215ENST00000539891 CEP170P1Q96L14 293 aa12.1□□□□□ -0.47
SLC3A2-215ENST00000539891 PPP1R16BQ96T49 567 aa12.1□□□□□ -0.47
SLC3A2-215ENST00000539891 RNF216Q9NWF9 866 aaPredicted RBP12.1□□□□□ -0.47
SLC3A2-215ENST00000539891 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.1□□□□□ -0.47
SLC3A2-215ENST00000539891 MTCH2Q9Y6C9 303 aa12.1□□□□□ -0.47
SLC3A2-215ENST00000539891 XIRP2A4UGR9 3374 aa12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 C9IYK1 514 aa12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 GTPBP6O43824 516 aaPredicted RBP12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 GAS2O43903 313 aaKnown RBP12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 LINC00271P0C7V0 271 aa12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 XRCC6P12956 609 aaKnown RBP eCLIP12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 IGFBP4P22692 258 aa12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 TOB1P50616 345 aaPredicted RBP12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 FAM189BP81408 668 aa12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 CUL4AQ13619 759 aa12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 ZNF174Q15697 407 aa12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 SLC24A5Q71RS6 500 aa12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 ZNF410Q86VK4 478 aa12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 FIBCD1Q8N539 461 aa12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 C4orf32Q8N8J7 132 aa12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 CLP1Q92989 425 aaKnown RBP12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 ADAM2Q99965 735 aa12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 C17orf80Q9BSJ5 609 aa12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 GCOM2Q9BZD3 368 aaPredicted RBP12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 ANKEF1Q9NU02 776 aa12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 SUCLA2Q9P2R7 463 aaPredicted RBP12.09□□□□□ -0.47
SLC3A2-215ENST00000539891 ATG2AQ2TAZ0 1938 aa12.08□□□□□ -0.47
SLC3A2-215ENST00000539891 ADGRA3Q8IWK6 1321 aa12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 DENND3A2RUS2 1198 aa12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 POTEMA6NI47 508 aa12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 C5orf67F2Z3F1 127 aa12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 ZBTB39O15060 712 aa12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 SPATA31C1P0DKV0 1188 aa12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 FXR2P51116 673 aaKnown RBP eCLIP12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 POLGP54098 1239 aaPredicted RBP12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 EPC2Q52LR7 807 aa12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 XKR9Q5GH70 373 aa12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 TMEM192Q8IY95 271 aa12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 CMTR2Q8IYT2 770 aaKnown RBP12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 FBXO22Q8NEZ5 403 aa12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 NLRP7Q8WX94 980 aa12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 POLR3CQ9BUI4 534 aaPredicted RBP12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 INO80BQ9C086 356 aaPredicted RBP12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 ELAC1Q9H777 363 aaKnown RBP12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 TUFT1Q9NNX1 390 aa12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 SMC3Q9UQE7 1217 aa12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 RWDD3Q9Y3V2 267 aa12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 GTF3C3Q9Y5Q9 886 aa12.08□□□□□ -0.48
SLC3A2-215ENST00000539891 BRWD1Q9NSI6 2320 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 MYO7AQ13402 2215 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 VCANP13611 3396 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 A0A087WZ62 844 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 LAD1O00515 517 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 ASAP2O43150 1006 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 DGAT1O75907 488 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 RB1P06400 928 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 MUTP22033 750 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 TECP42680 631 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 RARRES1P49788 294 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 BTG3Q14201 252 aaPredicted RBP12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 PDIA5Q14554 519 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 EMC2Q15006 297 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 RILPL1Q5EBL4 403 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 CATSPER3Q86XQ3 398 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 RHPN2Q8IUC4 686 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 ERMNQ8TAM6 284 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 GDPD5Q8WTR4 605 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 TCP11Q8WWU5 503 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 PSPC1Q8WXF1 523 aaKnown RBP12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 ZNF668Q96K58 619 aaPredicted RBP12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 SCLT1Q96NL6 688 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 FDXACB1Q9BRP7 624 aaPredicted RBP12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 CHST12Q9NRB3 414 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 TMEM161AQ9NX61 479 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 MTUS1Q9ULD2 1270 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 PCDHB7Q9Y5E2 793 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 PCDHB6Q9Y5E3 794 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 COL4A3BPQ9Y5P4 624 aa12.07□□□□□ -0.48
SLC3A2-215ENST00000539891 H3BNC9 293 aa12.06□□□□□ -0.48
SLC3A2-215ENST00000539891 H3BQV1 296 aa12.06□□□□□ -0.48
SLC3A2-215ENST00000539891 ZSCAN20P17040 1043 aaPredicted RBP12.06□□□□□ -0.48
SLC3A2-215ENST00000539891 SFPQP23246 707 aaKnown RBP eCLIP12.06□□□□□ -0.48
SLC3A2-215ENST00000539891 RPA1P27694 616 aa12.06□□□□□ -0.48
SLC3A2-215ENST00000539891 BMPR1AP36894 532 aa12.06□□□□□ -0.48
SLC3A2-215ENST00000539891 PRPHP41219 470 aa12.06□□□□□ -0.48
SLC3A2-215ENST00000539891 PTGDRQ13258 359 aa12.06□□□□□ -0.48
SLC3A2-215ENST00000539891 NBR1Q14596 966 aa12.06□□□□□ -0.48
SLC3A2-215ENST00000539891 MCTP1Q6DN14 999 aa12.06□□□□□ -0.48
SLC3A2-215ENST00000539891 PRPF31Q8WWY3 499 aaKnown RBP12.06□□□□□ -0.48
SLC3A2-215ENST00000539891 TMEM143Q96AN5 459 aa12.06□□□□□ -0.48
SLC3A2-215ENST00000539891 MTRQ99707 1265 aa12.06□□□□□ -0.48
SLC3A2-215ENST00000539891 TRAIPQ9BWF2 469 aa12.06□□□□□ -0.48
SLC3A2-215ENST00000539891 IFT122Q9HBG6 1241 aa12.06□□□□□ -0.48
SLC3A2-215ENST00000539891 XPNPEP1Q9NQW7 623 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms