RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ABCF2Q9UG63 623 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 TTC28Q96AY4 2481 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 PHIPQ8WWQ0 1821 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 LOC285556D6RIA3 1793 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 ABCB11O95342 1321 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 TTC26A0AVF1 554 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 SFI1A8K8P3 1242 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 B4E1Z4 1266 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 CHUKO15111 745 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 MEFVO15553 781 aaPredicted RBP8.41□□□□□ -1.06
CCDC60-204ENST00000539847 PJA2O43164 708 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 HSF2BPO75031 334 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 PPFIA3O75145 1194 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 PHACTR2O75167 634 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 LGR5O75473 907 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 KIAA0754O94854 1291 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 PARP1P09874 1014 aaKnown RBP8.41□□□□□ -1.06
CCDC60-204ENST00000539847 CCDC172P0C7W6 258 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 PDE6AP16499 860 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 ADORA1P30542 326 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 VAV2P52735 878 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 HMGCS2P54868 508 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 HERVK_113P62684 666 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 LMNB2Q03252 620 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 UBXN1Q04323 297 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 GRIN1Q05586 938 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 KIF5AQ12840 1032 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 PICALMQ13492 652 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 WWC2Q6AWC2 1192 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 NCAPH2Q6IBW4 605 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 WDR59Q6PJI9 974 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 KDM7AQ6ZMT4 941 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 CREG2Q8IUH2 290 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 C7orf61Q8IZ16 206 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 IQCKQ8N0W5 287 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 ARFGAP2Q8N6H7 521 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 OTUD6BQ8N6M0 293 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 GPRC5AQ8NFJ5 357 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 BCAS4Q8TDM0 211 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 NELFBQ8WX92 580 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 TRIB2Q92519 343 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 USP6NLQ92738 828 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 TNFRSF25Q93038 417 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 NSUN4Q96CB9 384 aaKnown RBP8.41□□□□□ -1.06
CCDC60-204ENST00000539847 ERGIC2Q96RQ1 377 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 TTYH3Q9C0H2 523 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 CXorf56Q9H5V9 222 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 ACTR5Q9H9F9 607 aaPredicted RBP8.41□□□□□ -1.06
CCDC60-204ENST00000539847 CABP5Q9NP86 173 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 GUCA1BQ9UMX6 200 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 SNX12Q9UMY4 172 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 PCDHB11Q9Y5F2 797 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 PCDHGA11Q9Y5H2 935 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 MYH2Q9UKX2 1941 aa8.41□□□□□ -1.06
CCDC60-204ENST00000539847 PFASO15067 1338 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 GRIN2DO15399 1336 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 BICDL2A1A5D9 508 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 CES2O00748 559 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 MSCO60682 206 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 RPN1P04843 607 aaKnown RBP8.4□□□□□ -1.06
CCDC60-204ENST00000539847 ATP1A1P05023 1023 aaKnown RBP8.4□□□□□ -1.06
CCDC60-204ENST00000539847 FGRP09769 529 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 RGS2P41220 211 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 CCT5P48643 541 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 RAB15P59190 212 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 MAP3K12Q12852 859 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 ECM1Q16610 540 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 LRIG3Q6UXM1 1119 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 KIAA1328Q86T90 577 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 IRF2BP1Q8IU81 584 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 CERS3Q8IU89 383 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 IFT20Q8IY31 132 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 SPATA5Q8NB90 893 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 ZNF384Q8TF68 577 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 CHP1Q99653 195 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 APBA2Q99767 749 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 UBE2OQ9C0C9 1292 aaKnown RBP8.4□□□□□ -1.06
CCDC60-204ENST00000539847 NAPBQ9H115 298 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 EPN3Q9H201 632 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 TMOD4Q9NZQ9 345 aa8.4□□□□□ -1.06
CCDC60-204ENST00000539847 MAGEC2Q9UBF1 373 aaPredicted RBP8.4□□□□□ -1.06
CCDC60-204ENST00000539847 ZMYND8Q9ULU4 1186 aaPredicted RBP8.4□□□□□ -1.06
CCDC60-204ENST00000539847 ZNF532Q9HCE3 1301 aa8.39□□□□□ -1.07
CCDC60-204ENST00000539847 A0A087X0B3 334 aa8.39□□□□□ -1.07
CCDC60-204ENST00000539847 A0A0U1RQJ8 604 aa8.39□□□□□ -1.07
CCDC60-204ENST00000539847 GRID2IPA4D2P6 1211 aa8.39□□□□□ -1.07
CCDC60-204ENST00000539847 HMGB1P1B2RPK0 211 aaPredicted RBP8.39□□□□□ -1.07
CCDC60-204ENST00000539847 RNF225M0QZC1 329 aaPredicted RBP8.39□□□□□ -1.07
CCDC60-204ENST00000539847 LAD1O00515 517 aa8.39□□□□□ -1.07
CCDC60-204ENST00000539847 RHOBTB3O94955 611 aa8.39□□□□□ -1.07
CCDC60-204ENST00000539847 BAG3O95817 575 aa8.39□□□□□ -1.07
CCDC60-204ENST00000539847 APPP05067 770 aa8.39□□□□□ -1.07
CCDC60-204ENST00000539847 GUCY1A2P33402 732 aa8.39□□□□□ -1.07
CCDC60-204ENST00000539847 PAFAH1B1P43034 410 aa8.39□□□□□ -1.07
CCDC60-204ENST00000539847 MCAMP43121 646 aa8.39□□□□□ -1.07
CCDC60-204ENST00000539847 AFMP43652 599 aa8.39□□□□□ -1.07
CCDC60-204ENST00000539847 MNAT1P51948 309 aa8.39□□□□□ -1.07
CCDC60-204ENST00000539847 STX17P56962 302 aa8.39□□□□□ -1.07
CCDC60-204ENST00000539847 GNGT1P63211 74 aa8.39□□□□□ -1.07
CCDC60-204ENST00000539847 CCNA1P78396 465 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms