RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 PKD2L1Q9P0L9 805 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 SLC9A2Q9UBY0 812 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 PNMA3Q9UL41 463 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 ZNF215Q9UL58 517 aaPredicted RBP11.14□□□□□ -0.63
SPARC-209ENST00000539687 AGTPBP1Q9UPW5 1226 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 KCNH4Q9UQ05 1017 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 MRFAP1Q9Y605 127 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 LRRC53A6NM62 1247 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 POTEB2H3BUK9 544 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 RNF225M0QZC1 329 aaPredicted RBP11.13□□□□□ -0.63
SPARC-209ENST00000539687 KIAA0391O15091 583 aaKnown RBP11.13□□□□□ -0.63
SPARC-209ENST00000539687 TGFB1I1O43294 461 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 AKAP3O75969 853 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 GFPT2O94808 682 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 TGFB3P10600 412 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 KCNA2P16389 499 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 NMT1P30419 496 aaKnown RBP11.13□□□□□ -0.63
SPARC-209ENST00000539687 EPHX2P34913 555 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 KIF11P52732 1056 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 NCKAP1LP55160 1127 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 GTF2BQ00403 316 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 CKAP4Q07065 602 aaKnown RBP11.13□□□□□ -0.63
SPARC-209ENST00000539687 KCNMA1Q12791 1236 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 MAPK7Q13164 816 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 NEDD9Q14511 834 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 ASIC2Q16515 512 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 DCAF17Q5H9S7 520 aaPredicted RBP11.13□□□□□ -0.63
SPARC-209ENST00000539687 EXOC8Q8IYI6 725 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 RNF10Q8N5U6 811 aaKnown RBP11.13□□□□□ -0.63
SPARC-209ENST00000539687 TRIM58Q8NG06 486 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 KCNN1Q92952 543 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 CDCA5Q96FF9 252 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 RPGRIP1Q96KN7 1286 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 SPAG5Q96R06 1193 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 FIZ1Q96SL8 496 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 SPATC1LQ9H0A9 340 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 WRAP73Q9P2S5 460 aaPredicted RBP11.13□□□□□ -0.63
SPARC-209ENST00000539687 CDC23Q9UJX2 597 aa11.13□□□□□ -0.63
SPARC-209ENST00000539687 ADM5C9JUS6 153 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 RBAK-RBAKDNI3L0D1 243 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 EXOC3O60645 756 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 TACC1O75410 805 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 CCNE2O96020 404 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 FERP16591 822 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 HOXD13P35453 343 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 ARHGAP25P42331 645 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 KLK7P49862 253 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 ALDH5A1P51649 535 aaPredicted RBP11.12□□□□□ -0.63
SPARC-209ENST00000539687 NCBP1Q09161 790 aaKnown RBP11.12□□□□□ -0.63
SPARC-209ENST00000539687 TTLL12Q14166 644 aaPredicted RBP11.12□□□□□ -0.63
SPARC-209ENST00000539687 IFI16Q16666 785 aaKnown RBP11.12□□□□□ -0.63
SPARC-209ENST00000539687 TDRD12Q587J7 1177 aaKnown RBP11.12□□□□□ -0.63
SPARC-209ENST00000539687 XKR3Q5GH77 459 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 TCERG1LQ5VWI1 586 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 FAM160B1Q5W0V3 765 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 IQCEQ6IPM2 695 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 GADL1Q6ZQY3 521 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 CCDC155Q8N6L0 562 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 SMCR8Q8TEV9 937 aaPredicted RBP11.12□□□□□ -0.63
SPARC-209ENST00000539687 GOLGA1Q92805 767 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 SECISBP2LQ93073 1101 aaKnown RBP11.12□□□□□ -0.63
SPARC-209ENST00000539687 SLC35C1Q96A29 364 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 WNK4Q96J92 1243 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 CEP170P1Q96L14 293 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 IFT74Q96LB3 600 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 WDR24Q96S15 920 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 IFIH1Q9BYX4 1025 aaKnown RBP11.12□□□□□ -0.63
SPARC-209ENST00000539687 MROH8Q9H579 483 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 ATP6V0A4Q9HBG4 840 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 NMRK2Q9NPI5 230 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 GABBR1Q9UBS5 961 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 TSKSQ9UJT2 592 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 ZMYM2Q9UBW7 1377 aa11.12□□□□□ -0.63
SPARC-209ENST00000539687 IGSF9BQ9UPX0 1349 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 SFI1A8K8P3 1242 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 PMM2O15305 246 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 PJA2O43164 708 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 ATP9AO75110 1047 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 SUPT20HL2P0C7V6 817 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 EDNRBP24530 442 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 EIF4A3P38919 411 aaKnown RBP11.11□□□□□ -0.63
SPARC-209ENST00000539687 RFC5P40937 340 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 PRKCIP41743 596 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 ACTR2P61160 394 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 POLR2FP61218 127 aaKnown RBP11.11□□□□□ -0.63
SPARC-209ENST00000539687 BFSP1Q12934 665 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 PRKG1Q13976 671 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 FAM102BQ5T8I3 360 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 KLHDC7AQ5VTJ3 777 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 HAUS6Q7Z4H7 955 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 SLC35F6Q8N357 371 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 XXYLT1Q8NBI6 393 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 SHCBP1Q8NEM2 672 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 BORCS6Q96GS4 357 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 FAM167AQ96KS9 214 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 CALR3Q96L12 384 aaKnown RBP11.11□□□□□ -0.63
SPARC-209ENST00000539687 FAM81BQ96LP2 452 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 NTPCRQ9BSD7 190 aaKnown RBP11.11□□□□□ -0.63
SPARC-209ENST00000539687 GANQ9H2C0 597 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms