RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CHUKO15111 745 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 EIF3DO15371 548 aaKnown RBP eCLIP10.49□□□□□ -0.73
CDH13-204ENST00000539548 TBCAO75347 108 aaKnown RBP10.49□□□□□ -0.73
CDH13-204ENST00000539548 GCNT3O95395 438 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 HOXA10P31260 410 aaPredicted RBP10.49□□□□□ -0.73
CDH13-204ENST00000539548 CIITAP33076 1130 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 SREBF1P36956 1147 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 DRG2P55039 364 aaKnown RBP10.49□□□□□ -0.73
CDH13-204ENST00000539548 BYSLQ13895 437 aaKnown RBP10.49□□□□□ -0.73
CDH13-204ENST00000539548 SLC15A2Q16348 729 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 RPAINQ86UA6 219 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 TAX1BP1Q86VP1 789 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 FMNL3Q8IVF7 1028 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 FAM186BQ8IYM0 893 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 CACNA2D3Q8IZS8 1091 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 CCDC114Q96M63 670 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 FMO2Q99518 471 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 ERP44Q9BS26 406 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 MKNK1Q9BUB5 465 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 RUSC1Q9BVN2 902 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 OSBPL7Q9BZF2 842 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 CARD9Q9H257 536 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 BHMT2Q9H2M3 363 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 SLC40A1Q9NP59 571 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 ZDHHC18Q9NUE0 388 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 NYAP2Q9P242 653 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 NR2E1Q9Y466 385 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 DAAM1Q9Y4D1 1078 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 PCDHB13Q9Y5F0 798 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 DCDC2CA8MYV0 355 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 C6orf229H3BNL8 230 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 PPP1R12BO60237 982 aaPredicted RBP10.49□□□□□ -0.73
CDH13-204ENST00000539548 HLA-DOAP06340 250 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 NUDT17P0C025 328 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 CCDC172P0C7W6 258 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 DRD4P21917 467 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 MMP14P50281 582 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 KCNA1Q09470 495 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 IFFO1Q0D2I5 559 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 DRAP1Q14919 205 aaPredicted RBP10.49□□□□□ -0.73
CDH13-204ENST00000539548 ERMARDQ5T6L9 678 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 DCAF12L1Q5VU92 463 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 GLYCTKQ8IVS8 523 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 CTNNBL1Q8WYA6 563 aaPredicted RBP10.49□□□□□ -0.73
CDH13-204ENST00000539548 TRIM51Q9BSJ1 452 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 OSGEPQ9NPF4 335 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 DNAJC12Q9UKB3 198 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 VAV3Q9UKW4 847 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 LY75O60449 1722 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 FAM86B1E9PN63 330 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 DNM1LO00429 736 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 MSH4O15457 936 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 FAM86B2P0C5J1 330 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 FMO5P49326 533 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 HADHBP55084 474 aaKnown RBP10.48□□□□□ -0.73
CDH13-204ENST00000539548 DR1Q01658 176 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 DHX34Q14147 1143 aaKnown RBP10.48□□□□□ -0.73
CDH13-204ENST00000539548 ANKRD20A8PQ5CZ79 823 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 GKAP1Q5VSY0 366 aaPredicted RBP10.48□□□□□ -0.73
CDH13-204ENST00000539548 SLFN13Q68D06 897 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 RINT1Q6NUQ1 792 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 HOOK3Q86VS8 718 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 XPO6Q96QU8 1125 aaKnown RBP10.48□□□□□ -0.73
CDH13-204ENST00000539548 EIF2AK1Q9BQI3 630 aaKnown RBP10.48□□□□□ -0.73
CDH13-204ENST00000539548 AMNQ9BXJ7 453 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 COA1Q9GZY4 146 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 ATP8A1Q9Y2Q0 1164 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 RABGAP1Q9Y3P9 1069 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 LTBP1Q14766 1721 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 ZMYM2Q9UBW7 1377 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 GOLGA6L10A0A0M3HER8 536 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 ANKRD62A6NC57 917 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 TRIM37O94972 964 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 GHRP10912 638 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 EEF2P13639 858 aaKnown RBP10.48□□□□□ -0.73
CDH13-204ENST00000539548 KLRC3Q07444 240 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 CDC42EP5Q6NZY7 148 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 CPLX4Q7Z7G2 160 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 CERS5Q8N5B7 392 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 PGM2Q96G03 612 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 CRAMP1Q96RY5 1269 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 TACO1Q9BSH4 297 aaKnown RBP10.48□□□□□ -0.73
CDH13-204ENST00000539548 FAM129AQ9BZQ8 928 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 EPB41L4BQ9H329 900 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 PABPC3Q9H361 631 aaKnown RBP10.48□□□□□ -0.73
CDH13-204ENST00000539548 KDM4CQ9H3R0 1056 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 BCAS3Q9H6U6 928 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 LRRC4CQ9HCJ2 640 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.48□□□□□ -0.73
CDH13-204ENST00000539548 FRMPD4Q14CM0 1322 aa10.48□□□□□ -0.73
CDH13-204ENST00000539548 SPDYE3A6NKU9 549 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 PHF20L1A8MW92 1017 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 F8W031 263 aaPredicted RBP10.47□□□□□ -0.73
CDH13-204ENST00000539548 CAND2O75155 1236 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 FAM13AO94988 1023 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 CYP3A4P08684 503 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 TNFAIP3P21580 790 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 PMS2P54278 862 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 KIF22Q14807 665 aa10.47□□□□□ -0.73
CDH13-204ENST00000539548 TCEAL1Q15170 157 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms