RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ZWINTO95229 277 aa15.61■□□□□ 0.09
CACNB1-206ENST00000539338 RAPH1Q70E73 1250 aa15.61■□□□□ 0.09
CACNB1-206ENST00000539338 CEP120Q8N960 986 aa15.61■□□□□ 0.09
CACNB1-206ENST00000539338 PACSIN2Q9UNF0 486 aaPredicted RBP15.61■□□□□ 0.09
CACNB1-206ENST00000539338 INO80Q9ULG1 1556 aaPredicted RBP15.61■□□□□ 0.09
CACNB1-206ENST00000539338 MT-ND3P03897 115 aa15.61■□□□□ 0.09
CACNB1-206ENST00000539338 EIF3BP55884 814 aaKnown RBP15.61■□□□□ 0.09
CACNB1-206ENST00000539338 IQCB1Q15051 598 aa15.61■□□□□ 0.09
CACNB1-206ENST00000539338 NKX1-1Q15270 411 aaPredicted RBP15.61■□□□□ 0.09
CACNB1-206ENST00000539338 GSDMBQ8TAX9 411 aa15.61■□□□□ 0.09
CACNB1-206ENST00000539338 OSBPL9Q96SU4 736 aa15.61■□□□□ 0.09
CACNB1-206ENST00000539338 POTEAQ6S8J7 498 aa15.61■□□□□ 0.09
CACNB1-206ENST00000539338 SRBD1Q8N5C6 995 aaKnown RBP15.61■□□□□ 0.09
CACNB1-206ENST00000539338 NKX2-3Q8TAU0 364 aa15.61■□□□□ 0.09
CACNB1-206ENST00000539338 MSTO1Q9BUK6 570 aa15.61■□□□□ 0.09
CACNB1-206ENST00000539338 FDX1P10109 184 aa15.61■□□□□ 0.09
CACNB1-206ENST00000539338 FAM84BQ96KN1 310 aaPredicted RBP15.61■□□□□ 0.09
CACNB1-206ENST00000539338 NUB1Q9Y5A7 615 aa15.61■□□□□ 0.09
CACNB1-206ENST00000539338 MRFAP1Q9Y605 127 aa15.61■□□□□ 0.09
CACNB1-206ENST00000539338 ZNF233A6NK53 670 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 NT5C2P49902 561 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 Q3C1V9 767 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 LDHDQ86WU2 507 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 DYDC2Q96IM9 177 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 MROH7-TTC4A0A0A0MT08 1334 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 K7ERI5 159 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 MARK3P27448 753 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 IRX4P78413 519 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 ZNF394Q53GI3 561 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 GLE1Q53GS7 698 aaKnown RBP15.6■□□□□ 0.09
CACNB1-206ENST00000539338 HIBCHQ6NVY1 386 aaPredicted RBP15.6■□□□□ 0.09
CACNB1-206ENST00000539338 AGBL3Q8NEM8 1001 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 TDRD3Q9H7E2 651 aaKnown RBP15.6■□□□□ 0.09
CACNB1-206ENST00000539338 ZWILCHQ9H900 591 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 PPRC1Q5VV67 1664 aaKnown RBP15.6■□□□□ 0.09
CACNB1-206ENST00000539338 ATP1A1P05023 1023 aaKnown RBP15.6■□□□□ 0.09
CACNB1-206ENST00000539338 FMR1Q06787 632 aaKnown RBP eCLIP15.6■□□□□ 0.09
CACNB1-206ENST00000539338 ASPHQ12797 758 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 ZNF211Q13398 564 aaPredicted RBP15.6■□□□□ 0.09
CACNB1-206ENST00000539338 NUDT12Q9BQG2 462 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 HEMGNQ9BXL5 484 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 PIDD1Q9HB75 910 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 SLC38A10Q9HBR0 1119 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 ANAPC7Q9UJX3 599 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 PEX19P40855 299 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 ALCAMQ13740 583 aa15.6■□□□□ 0.09
CACNB1-206ENST00000539338 USP50Q70EL3 339 aaPredicted RBP15.6■□□□□ 0.09
CACNB1-206ENST00000539338 DCDC2CA8MYV0 355 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 INHBEP58166 350 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 C6orf118Q5T5N4 469 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 ANGEL2Q5VTE6 544 aaKnown RBP15.59■□□□□ 0.09
CACNB1-206ENST00000539338 NUGGCQ68CJ6 796 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 HPS3Q969F9 1004 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 THOC1Q96FV9 657 aaKnown RBP15.59■□□□□ 0.09
CACNB1-206ENST00000539338 CFAP36Q96G28 342 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 CNOT8Q9UFF9 292 aaKnown RBP15.59■□□□□ 0.09
CACNB1-206ENST00000539338 FER1L4A9Z1Z3 1794 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 MED7O43513 233 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 CA4P22748 312 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 PADI6Q6TGC4 694 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 COL23A1Q86Y22 540 aaPredicted RBP15.59■□□□□ 0.09
CACNB1-206ENST00000539338 USP31Q70CQ4 1352 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 ASB14A6NK59 587 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 PLS3P13797 630 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 PRELPP51888 382 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 CCZ1BP86790 482 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 CCZ1P86791 482 aaPredicted RBP15.59■□□□□ 0.09
CACNB1-206ENST00000539338 KNOP1Q1ED39 458 aaKnown RBP15.59■□□□□ 0.09
CACNB1-206ENST00000539338 MMEL1Q495T6 779 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 E4F1Q66K89 784 aaPredicted RBP15.59■□□□□ 0.09
CACNB1-206ENST00000539338 RNF207Q6ZRF8 634 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 ADGRF4Q8IZF3 695 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 DNAAF3Q8N9W5 541 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 MCUQ8NE86 351 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 ELAC2Q9BQ52 826 aaKnown RBP15.59■□□□□ 0.09
CACNB1-206ENST00000539338 ADCY2Q08462 1091 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 DBN1Q16643 649 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 PASD1Q8IV76 773 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 UPF1Q92900 1129 aaKnown RBP eCLIP15.59■□□□□ 0.09
CACNB1-206ENST00000539338 DDX47Q9H0S4 455 aaKnown RBP15.59■□□□□ 0.09
CACNB1-206ENST00000539338 SNX25Q9H3E2 840 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 SUGT1Q9Y2Z0 365 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 PNPLA7Q6ZV29 1317 aa15.59■□□□□ 0.09
CACNB1-206ENST00000539338 RNF180Q86T96 592 aa15.58■□□□□ 0.09
CACNB1-206ENST00000539338 NLRP7Q8WX94 980 aa15.58■□□□□ 0.09
CACNB1-206ENST00000539338 HEXIM2Q96MH2 286 aaKnown RBP15.58■□□□□ 0.09
CACNB1-206ENST00000539338 GINM1Q9NU53 330 aa15.58■□□□□ 0.09
CACNB1-206ENST00000539338 ABCB11O95342 1321 aa15.58■□□□□ 0.09
CACNB1-206ENST00000539338 PRPSAP2O60256 369 aa15.58■□□□□ 0.09
CACNB1-206ENST00000539338 EVI5O60447 810 aa15.58■□□□□ 0.09
CACNB1-206ENST00000539338 GPC4O75487 556 aa15.58■□□□□ 0.09
CACNB1-206ENST00000539338 OATP04181 439 aa15.58■□□□□ 0.09
CACNB1-206ENST00000539338 CDO1Q16878 200 aa15.58■□□□□ 0.09
CACNB1-206ENST00000539338 ZNF449Q6P9G9 518 aa15.58■□□□□ 0.09
CACNB1-206ENST00000539338 NLRP4Q96MN2 994 aa15.58■□□□□ 0.09
CACNB1-206ENST00000539338 SPDYE16A6NNV3 312 aaPredicted RBP15.58■□□□□ 0.08
CACNB1-206ENST00000539338 HDLBPQ00341 1268 aaKnown RBP15.58■□□□□ 0.08
CACNB1-206ENST00000539338 MTMR1Q13613 665 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 QRICH1Q2TAL8 776 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 SPDYE2Q495Y8 402 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms