RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 MFSD14AQ96MC6 490 aa14.12□□□□□ -0.15
VAMP1-206ENST00000538970 C22orf23Q9BZE7 217 aa14.12□□□□□ -0.15
VAMP1-206ENST00000538970 CWH43Q9H720 699 aa14.12□□□□□ -0.15
VAMP1-206ENST00000538970 TLR9Q9NR96 1032 aa14.12□□□□□ -0.15
VAMP1-206ENST00000538970 NRBP2Q9NSY0 501 aa14.12□□□□□ -0.15
VAMP1-206ENST00000538970 TYW1Q9NV66 732 aaKnown RBP14.12□□□□□ -0.15
VAMP1-206ENST00000538970 MUTYHQ9UIF7 546 aa14.12□□□□□ -0.15
VAMP1-206ENST00000538970 PCDHA4Q9UN74 947 aa14.12□□□□□ -0.15
VAMP1-206ENST00000538970 M0R2N6 131 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 PSMD10O75832 226 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 FGF18O76093 207 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 DEXIO95424 95 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 TDP2O95551 362 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 LAG3P18627 525 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 EIF4BP23588 611 aaKnown RBP14.11□□□□□ -0.15
VAMP1-206ENST00000538970 GPC3P51654 580 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 SSRP1Q08945 709 aaKnown RBP14.11□□□□□ -0.15
VAMP1-206ENST00000538970 COASYQ13057 564 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 NPY5RQ15761 445 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 B3GNT9Q6UX72 402 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 RBM23Q86U06 439 aaKnown RBP14.11□□□□□ -0.15
VAMP1-206ENST00000538970 THNSL1Q8IYQ7 743 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 DAGLBQ8NCG7 672 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 SMRP1Q8NCR6 262 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 UPF3BQ9BZI7 483 aaKnown RBP14.11□□□□□ -0.15
VAMP1-206ENST00000538970 TMEM117Q9H0C3 514 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 RNF19AQ9NV58 838 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 FAM86C1Q9NVL1 165 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 BARX2Q9UMQ3 279 aaPredicted RBP14.11□□□□□ -0.15
VAMP1-206ENST00000538970 CYP46A1Q9Y6A2 500 aa14.11□□□□□ -0.15
VAMP1-206ENST00000538970 CYP3A7-CYP3A51PA0A087WV96 503 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 CPLX1O14810 134 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 FSCN2O14926 492 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 HOXA2O43364 376 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 DARSP14868 501 aaKnown RBP14.1□□□□□ -0.15
VAMP1-206ENST00000538970 CYP3A7P24462 503 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 ERVFC1P60507 584 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 TBC1D8BQ0IIM8 1120 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 TCF15Q12870 199 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 TARBP2Q15633 366 aaKnown RBP14.1□□□□□ -0.15
VAMP1-206ENST00000538970 LRRC55Q6ZSA7 311 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 BLIDQ8IZY5 108 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 FAM177A1Q8N128 213 aaPredicted RBP14.1□□□□□ -0.15
VAMP1-206ENST00000538970 LRRC43Q8N309 656 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 RDM1Q8NG50 284 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 ZNF274Q96GC6 653 aaPredicted RBP14.1□□□□□ -0.15
VAMP1-206ENST00000538970 ZNF668Q96K58 619 aaPredicted RBP14.1□□□□□ -0.15
VAMP1-206ENST00000538970 MBOAT7Q96N66 472 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 AIFM3Q96NN9 605 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 CASD1Q96PB1 797 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 TM6SF1Q9BZW5 370 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 TLE6Q9H808 572 aa14.1□□□□□ -0.15
VAMP1-206ENST00000538970 MYH9P35579 1960 aaKnown RBP14.09□□□□□ -0.15
VAMP1-206ENST00000538970 EVPLQ92817 2033 aa14.09□□□□□ -0.15
VAMP1-206ENST00000538970 STBD1O95210 358 aa14.09□□□□□ -0.15
VAMP1-206ENST00000538970 ZSCAN20P17040 1043 aaPredicted RBP14.09□□□□□ -0.15
VAMP1-206ENST00000538970 DRP2Q13474 957 aa14.09□□□□□ -0.15
VAMP1-206ENST00000538970 DUSP6Q16828 381 aa14.09□□□□□ -0.15
VAMP1-206ENST00000538970 HERC4Q5GLZ8 1057 aaPredicted RBP14.09□□□□□ -0.15
VAMP1-206ENST00000538970 MOXD1Q6UVY6 613 aa14.09□□□□□ -0.15
VAMP1-206ENST00000538970 MIER3Q7Z3K6 550 aa14.09□□□□□ -0.15
VAMP1-206ENST00000538970 ECHDC2Q86YB7 292 aa14.09□□□□□ -0.15
VAMP1-206ENST00000538970 VN1R2Q8NFZ6 395 aa14.09□□□□□ -0.15
VAMP1-206ENST00000538970 ETNPPLQ8TBG4 499 aa14.09□□□□□ -0.15
VAMP1-206ENST00000538970 MICAL1Q8TDZ2 1067 aa14.09□□□□□ -0.15
VAMP1-206ENST00000538970 NLRP7Q8WX94 980 aa14.09□□□□□ -0.15
VAMP1-206ENST00000538970 MRPS27Q92552 414 aaKnown RBP14.09□□□□□ -0.15
VAMP1-206ENST00000538970 SCLT1Q96NL6 688 aa14.09□□□□□ -0.15
VAMP1-206ENST00000538970 CEP89Q96ST8 783 aa14.09□□□□□ -0.15
VAMP1-206ENST00000538970 CDCA3Q99618 268 aaPredicted RBP14.09□□□□□ -0.15
VAMP1-206ENST00000538970 LARP6Q9BRS8 491 aaKnown RBP14.09□□□□□ -0.15
VAMP1-206ENST00000538970 NIFKQ9BYG3 293 aaKnown RBP14.09□□□□□ -0.15
VAMP1-206ENST00000538970 SEPT9Q9UHD8 586 aaPredicted RBP14.09□□□□□ -0.15
VAMP1-206ENST00000538970 LZTS1Q9Y250 596 aa14.09□□□□□ -0.15
VAMP1-206ENST00000538970 IGKV6-21A0A0C4DH24 114 aa14.08□□□□□ -0.16
VAMP1-206ENST00000538970 FSD2A1L4K1 749 aa14.08□□□□□ -0.16
VAMP1-206ENST00000538970 TMEM150BA6NC51 233 aa14.08□□□□□ -0.16
VAMP1-206ENST00000538970 PER2O15055 1255 aa14.08□□□□□ -0.16
VAMP1-206ENST00000538970 GFRA3O60609 400 aa14.08□□□□□ -0.16
VAMP1-206ENST00000538970 FGFR4P22455 802 aa14.08□□□□□ -0.16
VAMP1-206ENST00000538970 PTPN5P54829 565 aa14.08□□□□□ -0.16
VAMP1-206ENST00000538970 RBM10P98175 930 aaKnown RBP14.08□□□□□ -0.16
VAMP1-206ENST00000538970 PLCB3Q01970 1234 aa14.08□□□□□ -0.16
VAMP1-206ENST00000538970 STK3Q13188 491 aa14.08□□□□□ -0.16
VAMP1-206ENST00000538970 MTERF2Q49AM1 385 aa14.08□□□□□ -0.16
VAMP1-206ENST00000538970 XKR3Q5GH77 459 aa14.08□□□□□ -0.16
VAMP1-206ENST00000538970 CLLU1OSQ5K130 101 aa14.08□□□□□ -0.16
VAMP1-206ENST00000538970 GALNT17Q6IS24 598 aa14.08□□□□□ -0.16
VAMP1-206ENST00000538970 PDE12Q6L8Q7 609 aaKnown RBP14.08□□□□□ -0.16
VAMP1-206ENST00000538970 ZNF598Q86UK7 904 aaKnown RBP14.08□□□□□ -0.16
VAMP1-206ENST00000538970 RNF135Q8IUD6 432 aa14.08□□□□□ -0.16
VAMP1-206ENST00000538970 USP15Q9Y4E8 981 aaPredicted RBP14.08□□□□□ -0.16
VAMP1-206ENST00000538970 CACNA1AO00555 2505 aa14.08□□□□□ -0.16
VAMP1-206ENST00000538970 WDR81Q562E7 1941 aa14.07□□□□□ -0.16
VAMP1-206ENST00000538970 MYO15AQ9UKN7 3530 aa14.07□□□□□ -0.16
VAMP1-206ENST00000538970 A0A0U1RQF3 1178 aa14.07□□□□□ -0.16
VAMP1-206ENST00000538970 SLC37A4O43826 429 aa14.07□□□□□ -0.16
VAMP1-206ENST00000538970 ATF7P17544 494 aaPredicted RBP14.07□□□□□ -0.16
VAMP1-206ENST00000538970 PPM1AP35813 382 aa14.07□□□□□ -0.16
VAMP1-206ENST00000538970 PBX3P40426 434 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms