RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 CAPN15O75808 1086 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 FOSP01100 380 aaPredicted RBP9.77□□□□□ -0.85
SNHG1-209ENST00000538654 PDGFRBP09619 1106 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 RARAP10276 462 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 GNALP38405 381 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 EPS15P42566 896 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 NPEPPSP55786 919 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 GALNTL6Q49A17 601 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 VPS36Q86VN1 386 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 SYNE4Q8N205 404 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 RASGRP4Q8TDF6 673 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 CDK5RAP3Q96JB5 506 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 RAB3IPQ96QF0 476 aaPredicted RBP9.77□□□□□ -0.85
SNHG1-209ENST00000538654 TMEM109Q9BVC6 243 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 TRIM7Q9C029 511 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 ZFATQ9P243 1243 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.77□□□□□ -0.85
SNHG1-209ENST00000538654 E7ENQ6 273 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 IGF2BP3O00425 579 aaKnown RBP eCLIP9.76□□□□□ -0.85
SNHG1-209ENST00000538654 SNX3O60493 162 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 UBOX5O94941 541 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 FERP16591 822 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 INHBEP58166 350 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 PPARDQ03181 441 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 BNIP1Q12981 228 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 ZNF211Q13398 564 aaPredicted RBP9.76□□□□□ -0.85
SNHG1-209ENST00000538654 ANKRD20A2Q5SQ80 823 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 ANKRD20A1Q5TYW2 823 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 ANKRD20A3Q5VUR7 823 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 SLFN11Q7Z7L1 901 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 MYOCDQ8IZQ8 938 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 SPDYE1Q8NFV5 336 aaPredicted RBP9.76□□□□□ -0.85
SNHG1-209ENST00000538654 TPCN2Q8NHX9 752 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 GPKOWQ92917 476 aaPredicted RBP eCLIP9.76□□□□□ -0.852e-31■■■□□ 17.2
SNHG1-209ENST00000538654 HPS3Q969F9 1004 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 PRMT1Q99873 361 aaKnown RBP9.76□□□□□ -0.85
SNHG1-209ENST00000538654 RIOK1Q9BRS2 568 aaKnown RBP9.76□□□□□ -0.85
SNHG1-209ENST00000538654 PACSIN1Q9BY11 444 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 ARHGEF3Q9NR81 526 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 RASAL2Q9UJF2 1139 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.76□□□□□ -0.852e-26■□□□□ 8.9
SNHG1-209ENST00000538654 LAMB1P07942 1786 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 STARD3NLO95772 234 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 OAS1P00973 400 aaKnown RBP9.76□□□□□ -0.85
SNHG1-209ENST00000538654 SKIV2L2P42285 1042 aaKnown RBP9.76□□□□□ -0.85
SNHG1-209ENST00000538654 MSH2P43246 934 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 DRG2P55039 364 aaKnown RBP9.76□□□□□ -0.85
SNHG1-209ENST00000538654 KCNJ2P63252 427 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 NONOQ15233 471 aaKnown RBP eCLIP9.76□□□□□ -0.85
SNHG1-209ENST00000538654 SLC30A9Q6PML9 568 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 MFN1Q8IWA4 741 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 FAM133AQ8N9E0 248 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 LARP4BQ92615 738 aaKnown RBP9.76□□□□□ -0.85
SNHG1-209ENST00000538654 RAB34Q9BZG1 259 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 DPH5Q9H2P9 285 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 ABCF3Q9NUQ8 709 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 CUEDC1Q9NWM3 386 aaPredicted RBP9.76□□□□□ -0.85
SNHG1-209ENST00000538654 BARHL2Q9NY43 387 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 PARP2Q9UGN5 583 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 AGAP1Q9UPQ3 857 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 A0A1B0GUL6 1792 aa9.76□□□□□ -0.85
SNHG1-209ENST00000538654 EME2A4GXA9 379 aaPredicted RBP9.75□□□□□ -0.85
SNHG1-209ENST00000538654 MYMKA6NI61 221 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 CCDC85CA6NKD9 419 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 TRAF5O00463 557 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 ZBTB48P10074 688 aaPredicted RBP9.75□□□□□ -0.85
SNHG1-209ENST00000538654 VEGFAP15692 232 aaPredicted RBP9.75□□□□□ -0.85
SNHG1-209ENST00000538654 PTENP60484 403 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 ARID5AQ03989 594 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 DHX34Q14147 1143 aaKnown RBP9.75□□□□□ -0.85
SNHG1-209ENST00000538654 TAF11Q15544 211 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 PDCD2Q16342 344 aaPredicted RBP9.75□□□□□ -0.85
SNHG1-209ENST00000538654 CMPK2Q5EBM0 449 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 MFSD4BQ5TF39 518 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 LMNTD2Q8IXW0 634 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 ERP44Q9BS26 406 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 ADAM7Q9H2U9 754 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 STXBP5LQ9Y2K9 1186 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 GRXCR2A6NFK2 248 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 ENO4A6NNW6 628 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 CCNT1O60563 726 aaKnown RBP9.75□□□□□ -0.85
SNHG1-209ENST00000538654 TECP42680 631 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 BCAMP50895 628 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 DR1Q01658 176 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 TMEM266Q2M3C6 531 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 DUPD1Q68J44 220 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 ADGRA1Q86SQ6 560 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 DAAM2Q86T65 1068 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 NAF1Q96HR8 494 aaKnown RBP9.75□□□□□ -0.85
SNHG1-209ENST00000538654 LZTS2Q9BRK4 669 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 OSBPL1AQ9BXW6 950 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 MTRF1LQ9UGC7 380 aaKnown RBP9.75□□□□□ -0.85
SNHG1-209ENST00000538654 ARL2BPQ9Y2Y0 163 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 DAAM1Q9Y4D1 1078 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 CYP2D7A0A087X1C5 515 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 TSPY2A6NKD2 308 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 ATG7O95352 703 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 ITGA4P13612 1032 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 MRPS35P82673 323 aaKnown RBP9.75□□□□□ -0.85
SNHG1-209ENST00000538654 ZCWPW2Q504Y3 356 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms