RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 SLC4A7Q9Y6M7 1214 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 M0R2C6 588 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 DIAPH2O60879 1101 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 MIS18BP1Q6P0N0 1132 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 CCNI2Q6ZMN8 369 aaPredicted RBP7.38□□□□□ -1.23
SORT1-209ENST00000538502 MAPKAPK5Q8IW41 473 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 SMYD4Q8IYR2 804 aaPredicted RBP7.38□□□□□ -1.23
SORT1-209ENST00000538502 BTBD6Q96KE9 485 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 GIMAP4Q9NUV9 329 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 hCG_1642624A0A1W2PR95 340 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 C4BPBP20851 252 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 HSPA2P54652 639 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 ADCY1Q08828 1119 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 KDM7AQ6ZMT4 941 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 SPATA4Q8NEY3 305 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 CDHR1Q96JP9 859 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 SH3GL2Q99962 352 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 HINFPQ9BQA5 517 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 ASNSD1Q9NWL6 643 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 SLC5A4Q9NY91 659 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 ADAMTS12P58397 1594 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 TMCC1O94876 653 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 ZRANB2O95218 330 aaKnown RBP eCLIP7.37□□□□□ -1.23
SORT1-209ENST00000538502 ATP1A3P13637 1013 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 TRAPPC3LQ5T215 181 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 XPO6Q96QU8 1125 aaKnown RBP7.37□□□□□ -1.23
SORT1-209ENST00000538502 MAGEB5Q9BZ81 275 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 KDM4CQ9H3R0 1056 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 CCDC87Q9NVE4 849 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 LIMA1Q9UHB6 759 aaKnown RBP7.37□□□□□ -1.23
SORT1-209ENST00000538502 FBXL5Q9UKA1 691 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 SESN1Q9Y6P5 492 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 GOLGA8JA6NMD2 632 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 ZSCAN20P17040 1043 aaPredicted RBP7.37□□□□□ -1.23
SORT1-209ENST00000538502 POLA2Q14181 598 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 CHRNA2Q15822 529 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 TTC39CQ8N584 583 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 SMCR8Q8TEV9 937 aaPredicted RBP7.37□□□□□ -1.23
SORT1-209ENST00000538502 CCDC127Q96BQ5 260 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 PRMT1Q99873 361 aaKnown RBP7.37□□□□□ -1.23
SORT1-209ENST00000538502 COG4Q9H9E3 785 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 TYW5A2RUC4 315 aaKnown RBP7.37□□□□□ -1.23
SORT1-209ENST00000538502 HNRNPDLO14979 420 aaKnown RBP7.37□□□□□ -1.23
SORT1-209ENST00000538502 SERPINB1P30740 379 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 LSP1P33241 339 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 KCNB1Q14721 858 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 FAM47EQ6ZV65 393 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 PRUNE1Q86TP1 453 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 MMGT1Q8N4V1 131 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 SYBUQ9NX95 663 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 AP4S1Q9Y587 144 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 PRDM15P57071 1507 aaPredicted RBP7.37□□□□□ -1.23
SORT1-209ENST00000538502 GTPBP10A4D1E9 387 aaKnown RBP7.37□□□□□ -1.23
SORT1-209ENST00000538502 TBC1D4O60343 1298 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 SPAG6O75602 509 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 KRT7P08729 469 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 SERPINB9P50453 376 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 CYP27A1Q02318 531 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 CCDC144BQ3MJ40 725 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 TNIP2Q8NFZ5 429 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 NCLNQ969V3 563 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 CYFIP2Q96F07 1278 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 PPME1Q9Y570 386 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 ZHX2Q9Y6X8 837 aa7.37□□□□□ -1.23
SORT1-209ENST00000538502 LRRC53A6NM62 1247 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 PSMD14O00487 310 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 RIMBP2O15034 1052 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 ITIH2P19823 946 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 NFKBIAP25963 317 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 ATP7AQ04656 1500 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 TMTC4Q5T4D3 741 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 FBXW10Q5XX13 1052 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 CDKL3Q8IVW4 592 aaPredicted RBP7.36□□□□□ -1.23
SORT1-209ENST00000538502 MCUQ8NE86 351 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 TTC8Q8TAM2 541 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 DACH2Q96NX9 599 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 ZNF577Q9BSK1 485 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 VCPKMTQ9H867 229 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 ABCF3Q9NUQ8 709 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 TCP11X1B4DZS4 312 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 NPR1P16066 1061 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 VSNL1P62760 191 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 DSG1Q02413 1049 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 CCDC15Q0P6D6 951 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 AP3B2Q13367 1082 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 RFFLQ8WZ73 363 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 ATP6V0A4Q9HBG4 840 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 A0A1W2PQJ5 194 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 O00370 1275 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 SRGAP2O75044 1071 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 DNAJC6O75061 913 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 PHF2O75151 1096 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 SNUPNO95149 360 aaKnown RBP7.36□□□□□ -1.23
SORT1-209ENST00000538502 TTLL1O95922 423 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 TBXAS1P24557 533 aaPredicted RBP7.36□□□□□ -1.23
SORT1-209ENST00000538502 CCZ1BP86790 482 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 CCZ1P86791 482 aaPredicted RBP7.36□□□□□ -1.23
SORT1-209ENST00000538502 GUCY1A3Q02108 690 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 PATL1Q86TB9 770 aaKnown RBP7.36□□□□□ -1.23
SORT1-209ENST00000538502 PLD3Q8IV08 490 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms