RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 CDC42EP1Q00587 391 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 ADAM15Q13444 863 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 NONOQ15233 471 aaKnown RBP eCLIP9.74□□□□□ -0.85
DDB1-212ENST00000538470 TARBP2Q15633 366 aaKnown RBP9.74□□□□□ -0.85
DDB1-212ENST00000538470 UGCGQ16739 394 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 XKR3Q5GH77 459 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 B3GNT9Q6UX72 402 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 MIER3Q7Z3K6 550 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 KRT25Q7Z3Z0 450 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 COLGALT1Q8NBJ5 622 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 SMRP1Q8NCR6 262 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 FAM122AQ96E09 287 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 SCLT1Q96NL6 688 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 UIMC1Q96RL1 719 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 PPP1R16BQ96T49 567 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 NAP1L4Q99733 375 aaKnown RBP9.74□□□□□ -0.85
DDB1-212ENST00000538470 UPF3BQ9BZI7 483 aaKnown RBP9.74□□□□□ -0.85
DDB1-212ENST00000538470 TMEM117Q9H0C3 514 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 ADAMTS10Q9H324 1103 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 C11orf16Q9NQ32 467 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 PIEZO1Q92508 2521 aa9.74□□□□□ -0.85
DDB1-212ENST00000538470 CARNS1A5YM72 827 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 DKC1O60832 514 aaKnown RBP eCLIP9.73□□□□□ -0.85
DDB1-212ENST00000538470 PPFIA3O75145 1194 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 FGF18O76093 207 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 TDP2O95551 362 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 SRGAP2BP0DMP2 458 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 FGFR1P11362 822 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 XBP1P17861 261 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 IRS1P35568 1242 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 NRIP1P48552 1158 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 PLCB3Q01970 1234 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 DLX2Q07687 328 aaPredicted RBP9.73□□□□□ -0.85
DDB1-212ENST00000538470 COASYQ13057 564 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 NPY5RQ15761 445 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 FAM102BQ5T8I3 360 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 TRMT1LQ7Z2T5 733 aaKnown RBP9.73□□□□□ -0.85
DDB1-212ENST00000538470 ADGRD2Q7Z7M1 963 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 ZNF410Q86VK4 478 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 THNSL1Q8IYQ7 743 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 ABI1Q8IZP0 508 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 LRRC71Q8N4P6 559 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 ETNPPLQ8TBG4 499 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 NLRP7Q8WX94 980 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 MSLNLQ96KJ4 702 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 JPH2Q9BR39 696 aaPredicted RBP9.73□□□□□ -0.85
DDB1-212ENST00000538470 MRPL9Q9BYD2 267 aaKnown RBP9.73□□□□□ -0.85
DDB1-212ENST00000538470 NIFKQ9BYG3 293 aaKnown RBP9.73□□□□□ -0.85
DDB1-212ENST00000538470 PDRG1Q9NUG6 133 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 DACT1Q9NYF0 836 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 SEPT9Q9UHD8 586 aaPredicted RBP9.73□□□□□ -0.85
DDB1-212ENST00000538470 DDX25Q9UHL0 483 aaKnown RBP9.73□□□□□ -0.85
DDB1-212ENST00000538470 RAPGEFL1Q9UHV5 662 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 PPME1Q9Y570 386 aa9.73□□□□□ -0.85
DDB1-212ENST00000538470 IGKV6-21A0A0C4DH24 114 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 FAM86C2PA6NEL3 165 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 FSCN2O14926 492 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 LINC01565O15544 149 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 CSPG5O95196 566 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 GLP2RO95838 553 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 IBSPP21815 317 aaPredicted RBP9.72□□□□□ -0.85
DDB1-212ENST00000538470 SFPQP23246 707 aaKnown RBP eCLIP9.72□□□□□ -0.85
DDB1-212ENST00000538470 GTF2F1P35269 517 aaKnown RBP eCLIP9.72□□□□□ -0.85
DDB1-212ENST00000538470 DNM2P50570 870 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 ANAPC15P60006 121 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 ANKRD1Q15327 319 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 CLUL1Q15846 466 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 DUSP6Q16828 381 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 ECHDC2Q86YB7 292 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 MRPS27Q92552 414 aaKnown RBP9.72□□□□□ -0.85
DDB1-212ENST00000538470 ZNF558Q96NG5 402 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 CASD1Q96PB1 797 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 PHF20Q9BVI0 1012 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 TRAIPQ9BWF2 469 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 GCOM2Q9BZD3 368 aaPredicted RBP9.72□□□□□ -0.85
DDB1-212ENST00000538470 INO80BQ9C086 356 aaPredicted RBP9.72□□□□□ -0.85
DDB1-212ENST00000538470 IGFLR1Q9H665 355 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 CWH43Q9H720 699 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 CHST12Q9NRB3 414 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 RNF19AQ9NV58 838 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 TYW1Q9NV66 732 aaKnown RBP9.72□□□□□ -0.85
DDB1-212ENST00000538470 PPP4R2Q9NY27 417 aa9.72□□□□□ -0.85
DDB1-212ENST00000538470 PUF60Q9UHX1 559 aaKnown RBP9.72□□□□□ -0.85
DDB1-212ENST00000538470 TECTAO75443 2155 aa9.71□□□□□ -0.85
DDB1-212ENST00000538470 C5orf42Q9H799 3197 aa9.71□□□□□ -0.86
DDB1-212ENST00000538470 A0A0U1RQF3 1178 aa9.71□□□□□ -0.86
DDB1-212ENST00000538470 CCDC194A0A1B0GVG4 234 aa9.71□□□□□ -0.86
DDB1-212ENST00000538470 TBX3O15119 743 aa9.71□□□□□ -0.86
DDB1-212ENST00000538470 EOMESO95936 686 aa9.71□□□□□ -0.86
DDB1-212ENST00000538470 SKIP12755 728 aa9.71□□□□□ -0.86
DDB1-212ENST00000538470 RAB27AP51159 221 aa9.71□□□□□ -0.86
DDB1-212ENST00000538470 PSMC5P62195 406 aa9.71□□□□□ -0.86
DDB1-212ENST00000538470 SCRN1Q12765 414 aa9.71□□□□□ -0.86
DDB1-212ENST00000538470 STK3Q13188 491 aa9.71□□□□□ -0.86
DDB1-212ENST00000538470 PPP2R5CQ13362 524 aa9.71□□□□□ -0.86
DDB1-212ENST00000538470 INF2Q27J81 1249 aa9.71□□□□□ -0.86
DDB1-212ENST00000538470 MTERF2Q49AM1 385 aa9.71□□□□□ -0.86
DDB1-212ENST00000538470 HERC4Q5GLZ8 1057 aaPredicted RBP9.71□□□□□ -0.86
DDB1-212ENST00000538470 PPP4R3AQ6IN85 833 aa9.71□□□□□ -0.86
DDB1-212ENST00000538470 NEK8Q86SG6 692 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms