RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 MTG1Q9BT17 334 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TMEM106CQ9BVX2 250 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MAPK8IP1Q9UQF2 711 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 KBTBD13C9JR72 458 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 H0YCG3 227 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 RHOBTB3O94955 611 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 INSRRP14616 1297 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ATP4AP20648 1035 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 CDK11BP21127 795 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TFDP1Q14186 410 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PKN2Q16513 984 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 KIAA0753Q2KHM9 967 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 DPCR1Q3MIW9 517 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 NT5DC1Q5TFE4 455 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 EFCAB12Q6NXP0 572 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SFR1Q86XK3 245 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MYOCDQ8IZQ8 938 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SLC17A8Q8NDX2 589 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 DEPTORQ8TB45 409 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 LRRC15Q8TF66 581 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TMEM143Q96AN5 459 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MAP7D2Q96T17 732 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 RNF208Q9H0X6 261 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 POLR3FQ9H1D9 316 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 RNPEPQ9H4A4 650 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SEL1LQ9UBV2 794 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 CTNND2Q9UQB3 1225 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 GDAQ9Y2T3 454 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SYNRGQ9UMZ2 1314 aa11.78□□□□□ -0.52
TNFRSF1A-211ENST00000538363 BICDL2A1A5D9 508 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 C17orf102A2RUQ5 167 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 RSPH10B2B2RC85 870 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 K7ENM7 598 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ADCY6O43306 1168 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 GAS2O43903 313 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 KLRC4O43908 158 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 FGFR1OPO95684 399 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 RSPH10BP0C881 870 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 KLRC1P26715 233 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PEX3P56589 373 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 STX17P56962 302 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 LRRC41Q15345 812 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 GRIK4Q16099 956 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 KCNA10Q16322 511 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 CT47A1Q5JQC4 288 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 IER5Q5VY09 327 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 SMYD4Q8IYR2 804 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ANKRD20A12PQ8NF67 263 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 FAM200AQ8TCP9 573 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 NELFBQ8WX92 580 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 DNAJC19Q96DA6 116 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 C16orf70Q9BSU1 422 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 KMT5AQ9NQR1 393 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 MAGEC2Q9UBF1 373 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 NOD1Q9Y239 953 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 AKT3Q9Y243 479 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 WDR81Q562E7 1941 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 KAT6AQ92794 2004 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 COL1A2P08123 1366 aa11.77□□□□□ -0.53
TNFRSF1A-211ENST00000538363 LRRIQ4A6NIV6 560 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 MAFO75444 373 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 CABYRO75952 493 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 STBD1O95210 358 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 TFRCP02786 760 aaKnown RBP11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 SMIM10L2AP0DMW4 78 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 SMIM10L2BP0DMW5 78 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PLS3P13797 630 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ERCC5P28715 1186 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ABCD1P33897 745 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 STRN3Q13033 797 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PAK1Q13153 545 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ALCAMQ13740 583 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 FBXO46Q6PJ61 603 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 CXCL17Q6UXB2 119 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 C11orf57Q6ZUT1 292 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ZBTB8OSQ8IWT0 167 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 NELFCDQ8IXH7 590 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 AOPEPQ8N6M6 819 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 SPATA20Q8TB22 786 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 TRAPPC12Q8WVT3 735 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PSPC1Q8WXF1 523 aaKnown RBP11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 HPS3Q969F9 1004 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 RNF25Q96BH1 459 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 BICD1Q96G01 975 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 DHTKD1Q96HY7 919 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 GLT1D1Q96MS3 346 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 UNC93B1Q9H1C4 597 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 UPF3AQ9H1J1 476 aaKnown RBP11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 C17orf75Q9HAS0 396 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 GPRC5CQ9NQ84 441 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 SETD4Q9NVD3 440 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 SUCLA2Q9P2R7 463 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 EXOC7Q9UPT5 735 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 MYH11P35749 1972 aa11.76□□□□□ -0.53
TNFRSF1A-211ENST00000538363 M0QZ92 97 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 SLC16A4O15374 487 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ASAP2O43150 1006 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 CALUO43852 315 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ASGR1P07306 291 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms