RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 ARHGEF1Q92888 912 aaKnown RBP17.99■□□□□ 0.47
SCARB1-205ENST00000538291 AP1M1Q9BXS5 423 aa17.99■□□□□ 0.47
SCARB1-205ENST00000538291 G3BP2Q9UN86 482 aaKnown RBP17.99■□□□□ 0.47
SCARB1-205ENST00000538291 UBE4BO95155 1302 aa17.99■□□□□ 0.47
SCARB1-205ENST00000538291 STK36Q9NRP7 1315 aa17.99■□□□□ 0.47
SCARB1-205ENST00000538291 GCLMP48507 274 aa17.99■□□□□ 0.47
SCARB1-205ENST00000538291 SWSAP1Q6NVH7 229 aa17.99■□□□□ 0.47
SCARB1-205ENST00000538291 GIPC2Q8TF65 315 aa17.99■□□□□ 0.47
SCARB1-205ENST00000538291 PDCD6IPQ8WUM4 868 aaKnown RBP17.99■□□□□ 0.47
SCARB1-205ENST00000538291 ZMYND12Q9H0C1 365 aa17.99■□□□□ 0.47
SCARB1-205ENST00000538291 DCP1AQ9NPI6 582 aaPredicted RBP17.99■□□□□ 0.47
SCARB1-205ENST00000538291 GABBR1Q9UBS5 961 aa17.99■□□□□ 0.47
SCARB1-205ENST00000538291 ZRANB2O95218 330 aaKnown RBP eCLIP17.99■□□□□ 0.478e-6■■■□□ 17.5
SCARB1-205ENST00000538291 NCF2P19878 526 aaPredicted RBP17.99■□□□□ 0.47
SCARB1-205ENST00000538291 CA4P22748 312 aa17.99■□□□□ 0.47
SCARB1-205ENST00000538291 TBXAS1P24557 533 aaPredicted RBP17.99■□□□□ 0.47
SCARB1-205ENST00000538291 RAD54LQ92698 747 aa17.99■□□□□ 0.47
SCARB1-205ENST00000538291 MAGEB5Q9BZ81 275 aa17.99■□□□□ 0.47
SCARB1-205ENST00000538291 SUN2Q9UH99 717 aa17.99■□□□□ 0.47
SCARB1-205ENST00000538291 FARP1Q9Y4F1 1045 aaPredicted RBP17.99■□□□□ 0.47
SCARB1-205ENST00000538291 IFT88Q13099 833 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 DRP2Q13474 957 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 CCDC138Q96M89 665 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 SPATA33Q96N06 139 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 KRT82Q9NSB4 513 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 SDC4P31431 198 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 ARL4CP56559 192 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 NOP14P78316 857 aaKnown RBP17.98■□□□□ 0.47
SCARB1-205ENST00000538291 RESP18Q5W5W9 173 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 KRT39Q6A163 491 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 TBC1D10CQ8IV04 446 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 CEP72Q9P209 647 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 F5H6K3 240 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 CCDC188H7C350 402 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 DNAJC8O75937 253 aaPredicted RBP17.98■□□□□ 0.47
SCARB1-205ENST00000538291 LUC7L3O95232 432 aaKnown RBP17.98■□□□□ 0.47
SCARB1-205ENST00000538291 FGGP02679 453 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 KLRC3Q07444 240 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 EDEM3Q9BZQ6 932 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 MRPL46Q9H2W6 279 aaKnown RBP17.98■□□□□ 0.47
SCARB1-205ENST00000538291 ASB14A6NK59 587 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 STAT3P40763 770 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 RCAN1P53805 252 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 AFG1LQ8WV93 481 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 MRPL4Q9BYD3 311 aaKnown RBP17.98■□□□□ 0.47
SCARB1-205ENST00000538291 THEGQ9P2T0 379 aa17.98■□□□□ 0.47
SCARB1-205ENST00000538291 PVALEFA0A1B0GWK0 134 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 PODXLO00592 558 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 LARGE1O95461 756 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 ANGPTL8Q6UXH0 198 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 CALR3Q96L12 384 aaKnown RBP17.97■□□□□ 0.47
SCARB1-205ENST00000538291 TSPYL2Q9H2G4 693 aaPredicted RBP17.97■□□□□ 0.47
SCARB1-205ENST00000538291 OVOS2A0A0G2JMS6 1433 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 OVOS2A0A0J9YW53 1432 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 OVOS2Q6IE36 1432 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 NEDD4P46934 1319 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 E9PMD0 336 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 SNX2O60749 519 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 PSMC5P62195 406 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 CUL1Q13616 776 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 GRM4Q14833 912 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 SNCBQ16143 134 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 MTA3Q9BTC8 594 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 PDCD2Q16342 344 aaPredicted RBP17.97■□□□□ 0.47
SCARB1-205ENST00000538291 SERPINI1Q99574 410 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 MAP3K7O43318 606 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 HSPA4LO95757 839 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 N4BP2L2Q92802 583 aaPredicted RBP17.97■□□□□ 0.47
SCARB1-205ENST00000538291 CPVLQ9H3G5 476 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 HACD3Q9P035 362 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 SEL1LQ9UBV2 794 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 WDR91A4D1P6 747 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 ZNF579Q8NAF0 562 aaKnown RBP17.97■□□□□ 0.47
SCARB1-205ENST00000538291 SLC44A5Q8NCS7 719 aa17.97■□□□□ 0.47
SCARB1-205ENST00000538291 GPC5P78333 572 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 C6orf118Q5T5N4 469 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 SNX19Q92543 992 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 HERC5Q9UII4 1024 aaKnown RBP17.96■□□□□ 0.47
SCARB1-205ENST00000538291 KCNH4Q9UQ05 1017 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 SYNMO15061 1565 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 ADGRL3Q9HAR2 1447 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 M0QYV0 167 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 ESRRBO95718 433 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 ADCY2Q08462 1091 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 NSUN2Q08J23 767 aaKnown RBP eCLIP17.96■□□□□ 0.47
SCARB1-205ENST00000538291 POLR3FQ9H1D9 316 aaPredicted RBP17.96■□□□□ 0.47
SCARB1-205ENST00000538291 TXLNGQ9NUQ3 528 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 PACSIN2Q9UNF0 486 aaPredicted RBP17.96■□□□□ 0.47
SCARB1-205ENST00000538291 SYNGAP1Q96PV0 1343 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 HECW2Q9P2P5 1572 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 CFLARO15519 480 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 RASIP1Q5U651 963 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 TTC23LQ6PF05 361 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 PASD1Q8IV76 773 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 MFAP3LO75121 409 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 IGKV5-2P06315 115 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 SP8Q8IXZ3 490 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 KLHL29Q96CT2 875 aa17.96■□□□□ 0.47
SCARB1-205ENST00000538291 NOVA2Q9UNW9 492 aaKnown RBP17.96■□□□□ 0.47
SCARB1-205ENST00000538291 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms