RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 NCK2O43639 380 aa12.46□□□□□ -0.41
SLC28A1-204ENST00000538177 PALMO75781 387 aa12.46□□□□□ -0.41
SLC28A1-204ENST00000538177 GFPT2O94808 682 aa12.46□□□□□ -0.41
SLC28A1-204ENST00000538177 PLS3P13797 630 aa12.46□□□□□ -0.41
SLC28A1-204ENST00000538177 FERP16591 822 aa12.46□□□□□ -0.41
SLC28A1-204ENST00000538177 JAK3P52333 1124 aa12.46□□□□□ -0.41
SLC28A1-204ENST00000538177 C2orf54Q08AI8 447 aa12.46□□□□□ -0.41
SLC28A1-204ENST00000538177 C12orf56Q8IXR9 622 aa12.46□□□□□ -0.41
SLC28A1-204ENST00000538177 ZNF280CQ8ND82 737 aa12.46□□□□□ -0.41
SLC28A1-204ENST00000538177 REPS2Q8NFH8 660 aa12.46□□□□□ -0.41
SLC28A1-204ENST00000538177 C12orf42Q96LP6 360 aa12.46□□□□□ -0.41
SLC28A1-204ENST00000538177 SUGCTQ9HAC7 445 aa12.46□□□□□ -0.41
SLC28A1-204ENST00000538177 AS3MTQ9HBK9 375 aa12.46□□□□□ -0.41
SLC28A1-204ENST00000538177 GJA3Q9Y6H8 435 aa12.46□□□□□ -0.41
SLC28A1-204ENST00000538177 MYH11P35749 1972 aa12.46□□□□□ -0.41
SLC28A1-204ENST00000538177 K7ENM7 598 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 EXOC3O60645 756 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 ATP9AO75110 1047 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 MYCLP12524 364 aaPredicted RBP12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 PTPRAP18433 802 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 OAS2P29728 719 aaKnown RBP12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 YWHABP31946 246 aaKnown RBP12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 SFNP31947 248 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 STAT1P42224 750 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 PSMC5P62195 406 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 KRT76Q01546 638 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 CASP8Q14790 479 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 MEI1Q5TIA1 1274 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 ARHGEF16Q5VV41 709 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 ALKBH5Q6P6C2 394 aaKnown RBP12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 GJB7Q6PEY0 223 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 NSMFQ6X4W1 530 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 RDM1Q8NG50 284 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 RUBCNQ92622 972 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 WNK4Q96J92 1243 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 ACCSQ96QU6 501 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 STK33Q9BYT3 514 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 RNF146Q9NTX7 359 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 ANKEF1Q9NU02 776 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 ADAMTS5Q9UNA0 930 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 BCS1LQ9Y276 419 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 RIPK3Q9Y572 518 aa12.46□□□□□ -0.42
SLC28A1-204ENST00000538177 WDR64B1ANS9 1081 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 CCNE2O96020 404 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 CXCR5P32302 372 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 PAFAH1B1P43034 410 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 OAZ1P54368 228 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 GTF2BQ00403 316 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 BFSP1Q12934 665 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 BAATQ14032 418 aaPredicted RBP12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 UGCGQ16739 394 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 MAP9Q49MG5 647 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 CBWD6Q4V339 395 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 CBWD3Q5JTY5 395 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 CBWD5Q5RIA9 395 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 CCDC70Q6NSX1 233 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 CCNI2Q6ZMN8 369 aaPredicted RBP12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 MAEAQ7L5Y9 396 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 VPS36Q86VN1 386 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 VSIG10LQ86VR7 867 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 SENP7Q9BQF6 1050 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 PICK1Q9NRD5 415 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 RNF216Q9NWF9 866 aaPredicted RBP12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 INTUQ9ULD6 942 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 CD2APQ9Y5K6 639 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 GRID2IPA4D2P6 1211 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 DSG3P32926 999 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 SOX5P35711 763 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 SNRPFP62306 86 aaKnown RBP12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 CCDC181Q5TID7 509 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 ZKSCAN4Q969J2 545 aaPredicted RBP12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 GPRASP2Q96D09 838 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 WRNIP1Q96S55 665 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 INTS2Q9H0H0 1204 aaKnown RBP12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 VIPAS39Q9H9C1 493 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 DNAJC12Q9UKB3 198 aa12.45□□□□□ -0.42
SLC28A1-204ENST00000538177 DOCK1Q14185 1865 aa12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 C19orf81C9J6K1 198 aa12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 F8VZ95 297 aa12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 DDX3XO00571 662 aaKnown RBP eCLIP12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 BACH1O14867 736 aa12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 MAFGO15525 162 aa12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 EIF3JO75822 258 aaKnown RBP12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 NR3C2P08235 984 aa12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 TRIM49P0CI25 452 aa12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 TRIM49CP0CI26 452 aa12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 CCND2P30279 289 aa12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 MCCD1P59942 119 aaPredicted RBP12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 GPS2Q13227 327 aa12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 PLS1Q14651 629 aa12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 DRAP1Q14919 205 aaPredicted RBP12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 IFI16Q16666 785 aaKnown RBP12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 CFAP221Q4G0U5 840 aa12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 ZNF746Q6NUN9 644 aaPredicted RBP12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 INTS8Q75QN2 995 aaKnown RBP12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 HAUS6Q7Z4H7 955 aa12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 APOBEC3FQ8IUX4 373 aaKnown RBP12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 FMNL3Q8IVF7 1028 aa12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 SLC17A8Q8NDX2 589 aa12.44□□□□□ -0.42
SLC28A1-204ENST00000538177 SLC30A5Q8TAD4 765 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms