RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 RASSF3Q86WH2 238 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 SNX19Q92543 992 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 SH2D3AQ9BRG2 576 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 TMEM106CQ9BVX2 250 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 UNC13BO14795 1591 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 UBE4BO95155 1302 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 TNPO2O14787 897 aaKnown RBP12□□□□□ -0.49
LINC00346-201ENST00000538077 PHEXP78562 749 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 DHX9Q08211 1270 aaKnown RBP12□□□□□ -0.49
LINC00346-201ENST00000538077 PPP2R5EQ16537 467 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 EDEM3Q9BZQ6 932 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 ANAPC7Q9UJX3 599 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 QRICH2Q9H0J4 1663 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 MYO3BQ8WXR4 1341 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 GFPT1Q06210 699 aaPredicted RBP12□□□□□ -0.49
LINC00346-201ENST00000538077 MAP3K21Q5TCX8 1036 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 BRIP1Q9BX63 1249 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 SIK2Q9H0K1 926 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 ZBTB12Q9Y330 459 aaPredicted RBP12□□□□□ -0.49
LINC00346-201ENST00000538077 TRPM1Q7Z4N2 1603 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 EXOC1LA0A1B0GW35 172 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 HMBSP08397 361 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 LIG3P49916 1009 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 RBBP7Q16576 425 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 LCA5Q86VQ0 697 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 SCYL3Q8IZE3 742 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 KIF12Q96FN5 646 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 EPB41L3Q9Y2J2 1087 aaPredicted RBP12□□□□□ -0.49
LINC00346-201ENST00000538077 PSMC5P62195 406 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 COASYQ13057 564 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 ZNF746Q6NUN9 644 aaPredicted RBP11.99□□□□□ -0.49
LINC00346-201ENST00000538077 VCX3AQ9NNX9 186 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 USH1CQ9Y6N9 552 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 CFAP69A5D8W1 941 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 SNX2O60749 519 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 ABCD1P33897 745 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 TRMT10CQ7L0Y3 403 aaKnown RBP11.99□□□□□ -0.49
LINC00346-201ENST00000538077 BCAS4Q8TDM0 211 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 YIPF2Q9BWQ6 316 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 LDHAP00338 332 aaKnown RBP11.99□□□□□ -0.49
LINC00346-201ENST00000538077 RESTQ13127 1097 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 SCARF1Q14162 830 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 KRT31Q15323 416 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 TAS2R42Q7RTR8 314 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 PYROXD1Q8WU10 500 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 LXNQ9BS40 222 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 SH3GLB2Q9NR46 395 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 PIN4Q9Y237 131 aaKnown RBP11.99□□□□□ -0.49
LINC00346-201ENST00000538077 IFNAR1P17181 557 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 ENAHQ8N8S7 591 aaPredicted RBP11.99□□□□□ -0.49
LINC00346-201ENST00000538077 SPZ1Q9BXG8 430 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 SP110Q9HB58 689 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 SAYSD1Q9NPB0 183 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 TTC7AQ9ULT0 858 aaPredicted RBP11.99□□□□□ -0.49
LINC00346-201ENST00000538077 ABCA9Q8IUA7 1624 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 TRPA1O75762 1119 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 NR3C1P04150 777 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 CCT5P48643 541 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 KLC3Q6P597 504 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 CLEC4GQ6UXB4 293 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 RNF135Q8IUD6 432 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 NDUFAF2Q8N183 169 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 KCNH4Q9UQ05 1017 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 ORC6Q9Y5N6 252 aa11.99□□□□□ -0.49
LINC00346-201ENST00000538077 PPFIA2O75334 1257 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 PALMO75781 387 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 AP3B2Q13367 1082 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 NFIXQ14938 502 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 PFKFB3Q16875 520 aaPredicted RBP11.98□□□□□ -0.49
LINC00346-201ENST00000538077 STAG2Q8N3U4 1231 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 TOPORSQ9NS56 1045 aaPredicted RBP11.98□□□□□ -0.49
LINC00346-201ENST00000538077 ADAM22Q9P0K1 906 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 SLC13A4Q9UKG4 626 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 TPX2Q9ULW0 747 aaKnown RBP11.98□□□□□ -0.49
LINC00346-201ENST00000538077 CCNE1P24864 410 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 ART3Q13508 389 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 FBXL13Q8NEE6 735 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 NCLNQ969V3 563 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 ACAD9Q9H845 621 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 DCP1AQ9NPI6 582 aaPredicted RBP11.98□□□□□ -0.49
LINC00346-201ENST00000538077 PRPF4O43172 522 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC00346-201ENST00000538077 IGKV5-2P06315 115 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 WHAMMQ8TF30 809 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 MRFAP1L1Q96HT8 127 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 FAM81BQ96LP2 452 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 C11orf70Q9BRQ4 267 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 GCOM2Q9BZD3 368 aaPredicted RBP11.98□□□□□ -0.49
LINC00346-201ENST00000538077 KLHL11Q9NVR0 708 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 A6NNZ2 444 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 AKR1B1P15121 316 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 CDC25BP30305 580 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 NOP14P78316 857 aaKnown RBP11.98□□□□□ -0.49
LINC00346-201ENST00000538077 TUBB8Q3ZCM7 444 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 RSBN1LQ6PCB5 846 aaPredicted RBP11.98□□□□□ -0.49
LINC00346-201ENST00000538077 TOGARAM2Q6ZUX3 1019 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 RNF25Q96BH1 459 aaPredicted RBP11.98□□□□□ -0.49
LINC00346-201ENST00000538077 FAM167AQ96KS9 214 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 SPON2Q9BUD6 331 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 CNOT8Q9UFF9 292 aaKnown RBP11.98□□□□□ -0.49
LINC00346-201ENST00000538077 CNOT7Q9UIV1 285 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms