RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 MMTAG2Q9BU76 263 aaKnown RBP9.41□□□□□ -0.9
SPARC-208ENST00000538026 ZSWIM4Q9H7M6 989 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 MINDY3Q9H8M7 445 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 SLC28A3Q9HAS3 691 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 IFT122Q9HBG6 1241 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 PRDM6Q9NQX0 595 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 BMP2KQ9NSY1 1161 aaPredicted RBP9.41□□□□□ -0.9
SPARC-208ENST00000538026 SUCLA2Q9P2R7 463 aaPredicted RBP9.41□□□□□ -0.9
SPARC-208ENST00000538026 TCEAL9Q9UHQ7 104 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 SMC3Q9UQE7 1217 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 AKT3Q9Y243 479 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 COL4A4P53420 1690 aaPredicted RBP9.41□□□□□ -0.9
SPARC-208ENST00000538026 A0A087WZ62 844 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 MARCH6O60337 910 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 DGKIO75912 1065 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 AMHP03971 560 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 POU3F3P20264 500 aaPredicted RBP9.4□□□□□ -0.9
SPARC-208ENST00000538026 EIF4BP23588 611 aaKnown RBP9.4□□□□□ -0.9
SPARC-208ENST00000538026 CDC25AP30304 524 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 ARL2P36404 184 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 RARRES1P49788 294 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 FXR2P51116 673 aaKnown RBP eCLIP9.4□□□□□ -0.9
SPARC-208ENST00000538026 NFX1Q12986 1120 aaKnown RBP9.4□□□□□ -0.9
SPARC-208ENST00000538026 PAK2Q13177 524 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 GRB10Q13322 594 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 ORC2Q13416 577 aaPredicted RBP9.4□□□□□ -0.9
SPARC-208ENST00000538026 LARP1BQ659C4 914 aaKnown RBP9.4□□□□□ -0.9
SPARC-208ENST00000538026 POTEGQ6S5H5 508 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 IGSF22Q8N9C0 903 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 PRPF31Q8WWY3 499 aaKnown RBP9.4□□□□□ -0.9
SPARC-208ENST00000538026 ARNTL2Q8WYA1 636 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 SNX21Q969T3 373 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 CEP170P1Q96L14 293 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 ADAM2Q99965 735 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 FDXACB1Q9BRP7 624 aaPredicted RBP9.4□□□□□ -0.9
SPARC-208ENST00000538026 ZBED2Q9BTP6 218 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 POLR3CQ9BUI4 534 aaPredicted RBP9.4□□□□□ -0.9
SPARC-208ENST00000538026 RGS18Q9NS28 235 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 HCSTQ9UBK5 93 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 INSL6Q9Y581 213 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 MTCH2Q9Y6C9 303 aa9.4□□□□□ -0.9
SPARC-208ENST00000538026 RALGAPA2Q2PPJ7 1873 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 FOSL2P15408 326 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 ATF7P17544 494 aaPredicted RBP9.39□□□□□ -0.91
SPARC-208ENST00000538026 SYT1P21579 422 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 RPA1P27694 616 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 TMOD1P28289 359 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 HOXA11P31270 313 aaPredicted RBP9.39□□□□□ -0.91
SPARC-208ENST00000538026 GRIN1Q05586 938 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 XKR9Q5GH70 373 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 FAM102BQ5T8I3 360 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 MCTP1Q6DN14 999 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 FAM173BQ6P4H8 233 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 KCNK18Q7Z418 384 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 ZNF598Q86UK7 904 aaKnown RBP9.39□□□□□ -0.91
SPARC-208ENST00000538026 MAFAQ8NHW3 353 aaPredicted RBP9.39□□□□□ -0.91
SPARC-208ENST00000538026 ASAP3Q8TDY4 903 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 FTHL17Q9BXU8 183 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 POLD4Q9HCU8 107 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 GPRC5CQ9NQ84 441 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 ANKEF1Q9NU02 776 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 FOXD4L1Q9NU39 408 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 MTUS1Q9ULD2 1270 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 MTMR6Q9Y217 621 aa9.39□□□□□ -0.91
SPARC-208ENST00000538026 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.39□□□□□ -0.91
SPARC-208ENST00000538026 MEIS3P2A8K0S8 358 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 K7ELQ4 463 aaPredicted RBP9.38□□□□□ -0.91
SPARC-208ENST00000538026 M0QZ92 97 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 GPR182O15218 404 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 XRCC6P12956 609 aaKnown RBP eCLIP9.38□□□□□ -0.91
SPARC-208ENST00000538026 SARSP49591 514 aaKnown RBP9.38□□□□□ -0.91
SPARC-208ENST00000538026 ATP2C1P98194 919 aaPredicted RBP9.38□□□□□ -0.91
SPARC-208ENST00000538026 LAMTOR4Q0VGL1 99 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 RESTQ13127 1097 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 CAMK1Q14012 370 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 PDIA5Q14554 519 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 EMC2Q15006 297 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 EPC2Q52LR7 807 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 LRRC55Q6ZSA7 311 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 FERMT3Q86UX7 667 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 RHPN2Q8IUC4 686 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 GDPD5Q8WTR4 605 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 BSNDQ8WZ55 320 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 CLP1Q92989 425 aaKnown RBP9.38□□□□□ -0.91
SPARC-208ENST00000538026 INTS4Q96HW7 963 aaKnown RBP9.38□□□□□ -0.91
SPARC-208ENST00000538026 PNMA5Q96PV4 448 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 TGS1Q96RS0 853 aaKnown RBP9.38□□□□□ -0.91
SPARC-208ENST00000538026 MAP7D2Q96T17 732 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 TUFT1Q9NNX1 390 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 COL4A3BPQ9Y5P4 624 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 MRPL42Q9Y6G3 142 aaKnown RBP9.38□□□□□ -0.91
SPARC-208ENST00000538026 PLXNA4Q9HCM2 1894 aa9.38□□□□□ -0.91
SPARC-208ENST00000538026 TRIP11Q15643 1979 aa9.37□□□□□ -0.91
SPARC-208ENST00000538026 TCF20Q9UGU0 1960 aaKnown RBP9.37□□□□□ -0.91
SPARC-208ENST00000538026 TTLL13PA6NNM8 815 aa9.37□□□□□ -0.91
SPARC-208ENST00000538026 H3BQV1 296 aa9.37□□□□□ -0.91
SPARC-208ENST00000538026 DKC1O60832 514 aaKnown RBP eCLIP9.37□□□□□ -0.91
SPARC-208ENST00000538026 EDN1P05305 212 aa9.37□□□□□ -0.91
SPARC-208ENST00000538026 SRGAP2CP0DJJ0 459 aa9.37□□□□□ -0.91
SPARC-208ENST00000538026 FGFR1P11362 822 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms