RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 GRM2Q14416 872 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 BRDTQ58F21 947 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-207ENST00000537965 RPS26P11Q5JNZ5 115 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-207ENST00000537965 ARMCX2Q7L311 632 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 FAM160B2Q86V87 743 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 FAM20CQ8IXL6 584 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 USP38Q8NB14 1042 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 GMCL1P1Q8NEA9 526 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 MKL1Q969V6 931 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 GPATCH3Q96I76 525 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 UHRF1Q96T88 793 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-207ENST00000537965 C1QTNF1Q9BXJ1 281 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 HIPK3Q9H422 1215 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 ACAD9Q9H845 621 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 CYP4F12Q9HCS2 524 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 CLIP2Q9UDT6 1046 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 PCDHA11Q9Y5I1 949 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 SLC4A7Q9Y6M7 1214 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 REV3LO60673 3130 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 CYP2D7A0A087X1C5 515 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 LOC102724159A0A0B4J2E5 919 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 MINDY4BA8MYZ0 360 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 GSC2O15499 205 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 PLA2G6O60733 806 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 TIAF1O95411 115 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 NDUFB10O96000 172 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 ACRP10323 421 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 BMP3P12645 472 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 ACTN1P12814 892 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 CYP2C18P33260 490 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 STAT2P52630 851 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 IKQ13123 557 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-207ENST00000537965 PWP2Q15269 919 aaKnown RBP6.3□□□□□ -1.4
SNHG1-207ENST00000537965 ENOX2Q16206 610 aaKnown RBP6.3□□□□□ -1.4
SNHG1-207ENST00000537965 FSCN1Q16658 493 aaKnown RBP6.3□□□□□ -1.4
SNHG1-207ENST00000537965 C16orf59Q7L2K0 433 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 TLK2Q86UE8 772 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 CCDC144CPQ8IYA2 1237 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 C12orf50Q8NA57 414 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-207ENST00000537965 SLC43A3Q8NBI5 491 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 FAM122AQ96E09 287 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 STRBPQ96SI9 672 aaKnown RBP6.3□□□□□ -1.4
SNHG1-207ENST00000537965 MPHOSPH6Q99547 160 aaKnown RBP6.3□□□□□ -1.4
SNHG1-207ENST00000537965 NUP88Q99567 741 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-207ENST00000537965 NACAP1Q9BZK3 213 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 LRRCC1Q9C099 1032 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 BCL11AQ9H165 835 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 RAVER2Q9HCJ3 691 aaKnown RBP6.3□□□□□ -1.4
SNHG1-207ENST00000537965 MTMR4Q9NYA4 1195 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 PNMA2Q9UL42 364 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 RNF112Q9ULX5 631 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 HIF3AQ9Y2N7 669 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 RIPK3Q9Y572 518 aa6.3□□□□□ -1.4
SNHG1-207ENST00000537965 MUC3AQ02505 3323 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 PNMA6FA0A0J9YX94 578 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 MYADML2A6NDP7 307 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 GSG1L2A8MUP6 293 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 GRXCR1A8MXD5 290 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 B4DLN1 442 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 KIF28PB7ZC32 967 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 DYNC1LI2O43237 492 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-207ENST00000537965 KPNA6O60684 536 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 APPP05067 770 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 TSPY3P0CV98 308 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 TSPY8P0CW00 308 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 POU3F3P20264 500 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-207ENST00000537965 MAOBP27338 520 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 RFC2P35250 354 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 TDO2P48775 406 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 MRPL12P52815 198 aaKnown RBP6.29□□□□□ -1.4
SNHG1-207ENST00000537965 HNRNPUQ00839 825 aaKnown RBP eCLIP6.29□□□□□ -1.4
SNHG1-207ENST00000537965 POU4F3Q15319 338 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 CCDC85BQ15834 202 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-207ENST00000537965 TMEM67Q5HYA8 995 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 ARTNQ5T4W7 220 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 XP32Q5T750 250 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 SLFN13Q68D06 897 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 CXCL17Q6UXB2 119 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 OTOP2Q7RTS6 562 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 FAM133AQ8N9E0 248 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 PHOSPHO2Q8TCD6 241 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 PANK1Q8TE04 598 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 STAG1Q8WVM7 1258 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 APPBP2Q92624 585 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 ASB16Q96NS5 453 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 FAM83CQ9BQN1 747 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 TRIM56Q9BRZ2 755 aaKnown RBP6.29□□□□□ -1.4
SNHG1-207ENST00000537965 PUS7LQ9H0K6 701 aaKnown RBP6.29□□□□□ -1.4
SNHG1-207ENST00000537965 NKX2-4Q9H2Z4 354 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 C7orf69Q9H7B7 122 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 ZFYVE1Q9HBF4 777 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 VTA1Q9NP79 307 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 ZBTB40Q9NUA8 1239 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 PPP4R2Q9NY27 417 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 ADD3Q9UEY8 706 aaKnown RBP6.29□□□□□ -1.4
SNHG1-207ENST00000537965 ISY1Q9ULR0 285 aaKnown RBP6.29□□□□□ -1.4
SNHG1-207ENST00000537965 COG5Q9UP83 839 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 LCTP09848 1927 aa6.29□□□□□ -1.4
SNHG1-207ENST00000537965 MICAL3Q7RTP6 2002 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 RAD50Q92878 1312 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms