RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 PHF24Q9UPV7 400 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 O00370 1275 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 WNT7AO00755 349 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 SUN1O94901 812 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 SHBGP04278 402 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 GSTA2P09210 222 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 CCNB1P14635 433 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 XBP1P17861 261 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 TPP2P29144 1249 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 SESTD1Q86VW0 696 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 CCDC82Q8N4S0 544 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 TAF4BQ92750 862 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 FAM163AQ96GL9 167 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 DNAAF2Q9NVR5 837 aaKnown RBP12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 DLGAP2Q9P1A6 1054 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 PIM2Q9P1W9 311 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 GGT7Q9UJ14 662 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 SIK3Q9Y2K2 1263 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 PCDHAC2Q9Y5I4 1007 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 COL4A5P29400 1685 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 BICDL2A1A5D9 508 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 LRRC53A6NM62 1247 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 RHOBTB3O94955 611 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 RFC5P40937 340 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 RAD23BP54727 409 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 TGFB2P61812 414 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 TSNAXIP1Q2TAA8 658 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 TTC38Q5R3I4 469 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 DACT2Q5SW24 774 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 ACTRT1Q8TDG2 376 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 SEC14L1Q92503 715 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 TRIM7Q9C029 511 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 RNF41Q9H4P4 317 aaPredicted RBP12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 RXFP1Q9HBX9 757 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 DMAP1Q9NPF5 467 aaPredicted RBP12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 LUC7LQ9NQ29 371 aaKnown RBP12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 ARPP21Q9UBL0 812 aaPredicted RBP12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 ZMYND8Q9ULU4 1186 aaPredicted RBP12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 LAMB1P07942 1786 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 EPHB6O15197 1021 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 DAPK3O43293 454 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 ABCD1P33897 745 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 PTGER2P43116 358 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 PABPC1LQ4VXU2 614 aaKnown RBP12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 STRIP1Q5VSL9 837 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 IRGCQ6NXR0 463 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 RRAGAQ7L523 313 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 RTKN2Q8IZC4 609 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 MIPOL1Q8TD10 442 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 STK32AQ8WU08 396 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 DYNLL2Q96FJ2 89 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 PHF20Q9BVI0 1012 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 TXLNGYQ9BZA5 131 aa12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 PACSIN2Q9UNF0 486 aaPredicted RBP12.29□□□□□ -0.44
SEMA4D-221ENST00000537934 ZNF646O15015 1829 aaPredicted RBP12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 USP17L3A6NCW0 530 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 USP17L4A6NCW7 530 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 KLRC4O43908 158 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 GJB6O95452 261 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 NUDT17P0C025 328 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 TPBGLP0DKB5 382 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 CCNE1P24864 410 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 STAT6P42226 847 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 DPY19L2Q6NUT2 758 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 USP17L1Q7RTZ2 530 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 SLF2Q8IX21 1173 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 CMTR1Q8N1G2 835 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 SUPT20HQ8NEM7 779 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 FAM136AQ96C01 138 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 SHISA4Q96DD7 197 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 PICK1Q9NRD5 415 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 FAM114A2Q9NRY5 505 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 CYP39A1Q9NYL5 469 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 SUGT1Q9Y2Z0 365 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 NAV1Q8NEY1 1877 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 FLT1P17948 1338 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 CCDC169A6NNP5 214 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 CCDC188H7C350 402 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 MYL1P05976 194 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 MYBPC3Q14896 1274 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 PARP6Q2NL67 630 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 ACBD5Q5T8D3 534 aaPredicted RBP12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 C12orf60Q5U649 245 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 CCDC84Q86UT8 332 aaPredicted RBP12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 ENDOVQ8N8Q3 282 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 ASAP3Q8TDY4 903 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 DNAJC9Q8WXX5 260 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 P2RX5Q93086 422 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 MMADHCQ9H3L0 296 aaPredicted RBP12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 FAM207AQ9NSI2 230 aaPredicted RBP12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 PNMA3Q9UL41 463 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 CD2APQ9Y5K6 639 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 MYH1P12882 1939 aa12.28□□□□□ -0.44
SEMA4D-221ENST00000537934 KCNK3O14649 394 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 PEX11AO75192 247 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 PENKP01210 267 aaPredicted RBP12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 RCAN1P53805 252 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 RPS6KA1Q15418 735 aa12.27□□□□□ -0.44
SEMA4D-221ENST00000537934 IL17AQ16552 155 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms