RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 CASP5P51878 434 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 SMTNP53814 917 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 NCKAP1LP55160 1127 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 GJA9P57773 515 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 NKX3-2P78367 333 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 SPAG1Q07617 926 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 DMP1Q13316 513 aaPredicted RBP13.62□□□□□ -0.23
DDB1-209ENST00000537877 PPP2R5AQ15172 486 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 ZCWPW2Q504Y3 356 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 MAP3K21Q5TCX8 1036 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 CDKAL1Q5VV42 579 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 ZNF720Q7Z2F6 126 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 TCP11Q8WWU5 503 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 LENG1Q96BZ8 264 aaPredicted RBP13.62□□□□□ -0.23
DDB1-209ENST00000537877 IFT74Q96LB3 600 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 POLR3FQ9H1D9 316 aaPredicted RBP13.62□□□□□ -0.23
DDB1-209ENST00000537877 SEMA6BQ9H3T3 888 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 THAP9Q9H5L6 903 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 SPC25Q9HBM1 224 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 GPRC5CQ9NQ84 441 aa13.62□□□□□ -0.23
DDB1-209ENST00000537877 IGKV6-21A0A0C4DH24 114 aa13.61□□□□□ -0.23
DDB1-209ENST00000537877 TRIM49BA6NDI0 452 aa13.61□□□□□ -0.23
DDB1-209ENST00000537877 ZBTB42B2RXF5 422 aa13.61□□□□□ -0.23
DDB1-209ENST00000537877 FGFR1OPO95684 399 aaKnown RBP13.61□□□□□ -0.23
DDB1-209ENST00000537877 RARBP10826 455 aa13.61□□□□□ -0.23
DDB1-209ENST00000537877 NMT1P30419 496 aaKnown RBP13.61□□□□□ -0.23
DDB1-209ENST00000537877 DEKP35659 375 aaKnown RBP13.61□□□□□ -0.23
DDB1-209ENST00000537877 PMS1P54277 932 aaKnown RBP13.61□□□□□ -0.23
DDB1-209ENST00000537877 PLCB2Q00722 1185 aa13.61□□□□□ -0.23
DDB1-209ENST00000537877 FSCN1Q16658 493 aaKnown RBP13.61□□□□□ -0.23
DDB1-209ENST00000537877 KNOP1Q1ED39 458 aaKnown RBP13.61□□□□□ -0.23
DDB1-209ENST00000537877 CSGALNACT2Q8N6G5 542 aa13.61□□□□□ -0.23
DDB1-209ENST00000537877 KCNN1Q92952 543 aa13.61□□□□□ -0.23
DDB1-209ENST00000537877 DUSP9Q99956 384 aaKnown RBP13.61□□□□□ -0.23
DDB1-209ENST00000537877 NTPCRQ9BSD7 190 aaKnown RBP13.61□□□□□ -0.23
DDB1-209ENST00000537877 KATNAL1Q9BW62 490 aa13.61□□□□□ -0.23
DDB1-209ENST00000537877 STRA6Q9BX79 667 aa13.61□□□□□ -0.23
DDB1-209ENST00000537877 KCTD10Q9H3F6 313 aa13.61□□□□□ -0.23
DDB1-209ENST00000537877 RNPEPQ9H4A4 650 aa13.61□□□□□ -0.23
DDB1-209ENST00000537877 POLD4Q9HCU8 107 aa13.61□□□□□ -0.23
DDB1-209ENST00000537877 PDXKO00764 312 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 MAGEB2O15479 319 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 PRPF6O94906 941 aaKnown RBP13.6□□□□□ -0.23
DDB1-209ENST00000537877 INSRRP14616 1297 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 CNGA1P29973 690 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 ARL2P36404 184 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 NAMPTP43490 491 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 NPTX2P47972 431 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 PEX3P56589 373 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 GTF2BQ00403 316 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 CCDC173Q0VFZ6 552 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 TRIM32Q13049 653 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 EDRF1Q3B7T1 1238 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 IER5Q5VY09 327 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 ANKRD40Q6AI12 368 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 FAM114A1Q8IWE2 563 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 NELFCDQ8IXH7 590 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 RETREG2Q8NC44 543 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 KMT5AQ9NQR1 393 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 SAMSN1Q9NSI8 373 aaKnown RBP13.6□□□□□ -0.23
DDB1-209ENST00000537877 TYW1Q9NV66 732 aaKnown RBP13.6□□□□□ -0.23
DDB1-209ENST00000537877 WBP1LQ9NX94 342 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 TRAF3IP3Q9Y228 551 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 SIP14410 1827 aa13.6□□□□□ -0.23
DDB1-209ENST00000537877 ZMYM2Q9UBW7 1377 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 RRN3P2A6NIE6 340 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 AP5Z1O43299 807 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 CBFA2T2O43439 604 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 CALUO43852 315 aaPredicted RBP13.59□□□□□ -0.23
DDB1-209ENST00000537877 ZEB2O60315 1214 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 C22orf31O95567 290 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 ADCY5O95622 1261 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 C6orf222P0C671 652 aaPredicted RBP13.59□□□□□ -0.23
DDB1-209ENST00000537877 ATP1A3P13637 1013 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 FANCCQ00597 558 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 PPFIA1Q13136 1202 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 HAUS6Q7Z4H7 955 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 ZC3H3Q8IXZ2 948 aaKnown RBP13.59□□□□□ -0.23
DDB1-209ENST00000537877 ANKRD20A12PQ8NF67 263 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 GOLGA5Q8TBA6 731 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 PSPC1Q8WXF1 523 aaKnown RBP13.59□□□□□ -0.23
DDB1-209ENST00000537877 BSNDQ8WZ55 320 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 TMEM143Q96AN5 459 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 CEP63Q96MT8 703 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 ACCSQ96QU6 501 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 TRIM5Q9C035 493 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 TMEM206Q9H813 350 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 TRIM17Q9Y577 477 aa13.59□□□□□ -0.23
DDB1-209ENST00000537877 CCDC169A6NNP5 214 aa13.58□□□□□ -0.23
DDB1-209ENST00000537877 HAS3O00219 553 aa13.58□□□□□ -0.23
DDB1-209ENST00000537877 SLC16A4O15374 487 aa13.58□□□□□ -0.23
DDB1-209ENST00000537877 MSCO60682 206 aa13.58□□□□□ -0.23
DDB1-209ENST00000537877 MYL3P08590 195 aa13.58□□□□□ -0.23
DDB1-209ENST00000537877 CDK11BP21127 795 aaKnown RBP13.58□□□□□ -0.23
DDB1-209ENST00000537877 GLRA2P23416 452 aa13.58□□□□□ -0.23
DDB1-209ENST00000537877 EEF1GP26641 437 aaKnown RBP13.58□□□□□ -0.23
DDB1-209ENST00000537877 CST5P28325 142 aaPredicted RBP13.58□□□□□ -0.23
DDB1-209ENST00000537877 CCND3P30281 292 aaPredicted RBP13.58□□□□□ -0.23
DDB1-209ENST00000537877 GRK4P32298 578 aa13.58□□□□□ -0.23
DDB1-209ENST00000537877 HOXD13P35453 343 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 914.6 ms