RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 TRPM6Q9BX84 2022 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 GAS7O60861 476 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 DLATP10515 647 aaKnown RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 PIK3CAP42336 1068 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 TSTA3Q13630 321 aaPredicted RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 TTLL12Q14166 644 aaPredicted RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 MAPK11Q15759 364 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 AGBL2Q5U5Z8 902 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 FAM43BQ6ZT52 329 aaPredicted RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 SUGP1Q8IWZ8 645 aaKnown RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 PPM1KQ8N3J5 372 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 MRPL1Q9BYD6 325 aaKnown RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 ZMYND8Q9ULU4 1186 aaPredicted RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 KIF24Q5T7B8 1368 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 NCOR1O75376 2440 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 KIAA2026Q5HYC2 2103 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 GJA8P48165 433 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 MTTPP55157 894 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 YWHAHQ04917 246 aaPredicted RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 BLIDQ8IZY5 108 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 ZNF555Q8NEP9 628 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 DDI1Q8WTU0 396 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 UNC45AQ9H3U1 944 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 BAZ2AQ9UIF9 1905 aaKnown RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 LZTS3O60299 673 aaPredicted RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 CAV1Q03135 178 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 KRT17Q04695 432 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 ITGB3BPQ13352 177 aaPredicted RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 SLC39A6Q13433 755 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 SMCR8Q8TEV9 937 aaPredicted RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 GJA10Q969M2 543 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 MOV10L1Q9BXT6 1211 aaKnown RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 METTL14Q9HCE5 456 aaKnown RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 ZDHHC9Q9Y397 364 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 COL4A3BPQ9Y5P4 624 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 CASZ1Q86V15 1759 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 SYNMO15061 1565 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 CAPN9O14815 690 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 HNRNPRO43390 633 aaKnown RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 TRAPPC10P48553 1259 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 PARVBQ9HBI1 364 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 LRRIQ1Q96JM4 1722 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 ABCC4O15439 1325 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 K7ENM7 598 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 SASH1O94885 1247 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 LDHBP07195 334 aaKnown RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 GNL1P36915 607 aaPredicted RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 SLC1A4P43007 532 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 GFPT1Q06210 699 aaPredicted RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 HDDC2Q7Z4H3 204 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 GPKOWQ92917 476 aaPredicted RBP eCLIP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 ZNF594Q96JF6 807 aaPredicted RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 TRIM8Q9BZR9 551 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 GLT8D2Q9H1C3 349 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 MARCOQ9UEW3 520 aaPredicted RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 SFMBT1Q9UHJ3 866 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 PNMA2Q9UL42 364 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 CCDC142Q17RM4 750 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 MDM1Q8TC05 714 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 TTC25Q96NG3 672 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 MAP3K10Q02779 954 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 CCNI2Q6ZMN8 369 aaPredicted RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 KCNH5Q8NCM2 988 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 SLC13A1Q9BZW2 595 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 UNC13AQ9UPW8 1703 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 B2RBV5 119 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 WASLO00401 505 aaPredicted RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 FAM178BQ8IXR5 827 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 KCTD6Q8NC69 237 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 SPATA4Q8NEY3 305 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 RIOK1Q9BRS2 568 aaKnown RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 BEGAINQ9BUH8 593 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 THAP9Q9H5L6 903 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 MTO1Q9Y2Z2 717 aaKnown RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 TRPM2O94759 1503 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 E7ENQ6 273 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 AHCYL1O43865 530 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 KPNA2P52292 529 aaKnown RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 CCZ1BP86790 482 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 CCZ1P86791 482 aaPredicted RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 CAPRIN1Q14444 709 aaKnown RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 GORASP1Q9BQQ3 440 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 LRRC1Q9BTT6 524 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 UBN1Q9NPG3 1134 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 NDUFA13Q9P0J0 144 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 C2CD2Q9Y426 696 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 FAM26FQ5R3K3 315 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 ZNF507Q8TCN5 953 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 IPO11Q9UI26 975 aaKnown RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 MID2Q9UJV3 735 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 AURKCQ9UQB9 309 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 FAM47DPA6NHR8 397 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 PCP4L1A6NKN8 68 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 DMC1Q14565 340 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 E4F1Q66K89 784 aaPredicted RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 CALML6Q8TD86 181 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 TRIM39Q9HCM9 518 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 TTC7AQ9ULT0 858 aaPredicted RBP6.03□□□□□ -1.44
CSMD1-215ENST00000537824 MAGED2Q9UNF1 606 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms