RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 FGF18O76093 207 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 TDP2O95551 362 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 LAG3P18627 525 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 EIF4BP23588 611 aaKnown RBP10.91□□□□□ -0.66
CHD4-207ENST00000537634 GPC3P51654 580 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 STK3Q13188 491 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 DSC3Q14574 896 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 Q4G0T1 1027 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 GALNT17Q6IS24 598 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 RBM23Q86U06 439 aaKnown RBP10.91□□□□□ -0.66
CHD4-207ENST00000537634 ABI1Q8IZP0 508 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 FAM177A1Q8N128 213 aaPredicted RBP10.91□□□□□ -0.66
CHD4-207ENST00000537634 COLGALT1Q8NBJ5 622 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 DAGLBQ8NCG7 672 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 NLRP7Q8WX94 980 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 GJA10Q969M2 543 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 LARP6Q9BRS8 491 aaKnown RBP10.91□□□□□ -0.66
CHD4-207ENST00000537634 TM6SF1Q9BZW5 370 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 TMEM117Q9H0C3 514 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 ADAMTS10Q9H324 1103 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 TLE6Q9H808 572 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 TLR9Q9NR96 1032 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 TYW1Q9NV66 732 aaKnown RBP10.91□□□□□ -0.66
CHD4-207ENST00000537634 HCSTQ9UBK5 93 aa10.91□□□□□ -0.66
CHD4-207ENST00000537634 SEPT9Q9UHD8 586 aaPredicted RBP10.91□□□□□ -0.66
CHD4-207ENST00000537634 ARIH1Q9Y4X5 557 aaPredicted RBP10.91□□□□□ -0.66
CHD4-207ENST00000537634 CYP3A7-CYP3A51PA0A087WV96 503 aa10.9□□□□□ -0.66
CHD4-207ENST00000537634 CDKL5O76039 1030 aa10.9□□□□□ -0.66
CHD4-207ENST00000537634 DARSP14868 501 aaKnown RBP10.9□□□□□ -0.66
CHD4-207ENST00000537634 CYP3A7P24462 503 aa10.9□□□□□ -0.66
CHD4-207ENST00000537634 FAM189BP81408 668 aa10.9□□□□□ -0.66
CHD4-207ENST00000537634 NONOQ15233 471 aaKnown RBP eCLIP10.9□□□□□ -0.66
CHD4-207ENST00000537634 MTERF2Q49AM1 385 aa10.9□□□□□ -0.66
CHD4-207ENST00000537634 XKR3Q5GH77 459 aa10.9□□□□□ -0.66
CHD4-207ENST00000537634 PDE12Q6L8Q7 609 aaKnown RBP10.9□□□□□ -0.66
CHD4-207ENST00000537634 MOXD1Q6UVY6 613 aa10.9□□□□□ -0.66
CHD4-207ENST00000537634 KRT25Q7Z3Z0 450 aa10.9□□□□□ -0.66
CHD4-207ENST00000537634 LRRC43Q8N309 656 aa10.9□□□□□ -0.66
CHD4-207ENST00000537634 RNF169Q8NCN4 708 aa10.9□□□□□ -0.66
CHD4-207ENST00000537634 ZNF668Q96K58 619 aaPredicted RBP10.9□□□□□ -0.66
CHD4-207ENST00000537634 MSLNLQ96KJ4 702 aa10.9□□□□□ -0.66
CHD4-207ENST00000537634 AIFM3Q96NN9 605 aa10.9□□□□□ -0.66
CHD4-207ENST00000537634 PDRG1Q9NUG6 133 aa10.9□□□□□ -0.66
CHD4-207ENST00000537634 BARX2Q9UMQ3 279 aaPredicted RBP10.9□□□□□ -0.66
CHD4-207ENST00000537634 PCDHGC5Q9Y5F6 944 aa10.9□□□□□ -0.66
CHD4-207ENST00000537634 CCDC194A0A1B0GVG4 234 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 M0R2N6 131 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 EYA4O95677 639 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 NEFLP07196 543 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 SRGAP2BP0DMP2 458 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 XBP1P17861 261 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 PPM1AP35813 382 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 DNM2P50570 870 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 CDC42EP1Q00587 391 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 COASYQ13057 564 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 TARBP2Q15633 366 aaKnown RBP10.89□□□□□ -0.67
CHD4-207ENST00000537634 INF2Q27J81 1249 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 ECHDC2Q86YB7 292 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 SMRP1Q8NCR6 262 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 ETNPPLQ8TBG4 499 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 ZNF558Q96NG5 402 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 CDCA3Q99618 268 aaPredicted RBP10.89□□□□□ -0.67
CHD4-207ENST00000537634 NIFKQ9BYG3 293 aaKnown RBP10.89□□□□□ -0.67
CHD4-207ENST00000537634 GCOM2Q9BZD3 368 aaPredicted RBP10.89□□□□□ -0.67
CHD4-207ENST00000537634 CWH43Q9H720 699 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 ENTPD7Q9NQZ7 604 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 DACT1Q9NYF0 836 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 CLEC1BQ9P126 229 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 DDX25Q9UHL0 483 aaKnown RBP10.89□□□□□ -0.67
CHD4-207ENST00000537634 PUF60Q9UHX1 559 aaKnown RBP10.89□□□□□ -0.67
CHD4-207ENST00000537634 LZTS1Q9Y250 596 aa10.89□□□□□ -0.67
CHD4-207ENST00000537634 TMEM150BA6NC51 233 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 PER2O15055 1255 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 GLP2RO95838 553 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 FGFR4P22455 802 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 SFPQP23246 707 aaKnown RBP eCLIP10.88□□□□□ -0.67
CHD4-207ENST00000537634 PLCB3Q01970 1234 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 KRT17Q04695 432 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 DRP2Q13474 957 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 NPY5RQ15761 445 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 LETM2Q2VYF4 491 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 PLPP4Q5VZY2 271 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 KCNT2Q6UVM3 1135 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 B3GNT9Q6UX72 402 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 MRPS27Q92552 414 aaKnown RBP10.88□□□□□ -0.67
CHD4-207ENST00000537634 MBOAT7Q96N66 472 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 CASD1Q96PB1 797 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 TCF25Q9BQ70 676 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 SH2D3AQ9BRG2 576 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 SLKQ9H2G2 1235 aaPredicted RBP10.88□□□□□ -0.67
CHD4-207ENST00000537634 RNF19AQ9NV58 838 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 KCNJ14Q9UNX9 436 aa10.88□□□□□ -0.67
CHD4-207ENST00000537634 USP15Q9Y4E8 981 aaPredicted RBP10.88□□□□□ -0.67
CHD4-207ENST00000537634 STK36Q9NRP7 1315 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 A0A0U1RQF3 1178 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 DDX11L8A8MPP1 907 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 FSCN2O14926 492 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 SLC37A4O43826 429 aa10.87□□□□□ -0.67
CHD4-207ENST00000537634 CSDE1O75534 798 aaKnown RBP10.87□□□□□ -0.67
CHD4-207ENST00000537634 EOMESO95936 686 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms