RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 MED15Q96RN5 788 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 HDAC6Q9UBN7 1215 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 COL4A3BPQ9Y5P4 624 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 IGKV6-21A0A0C4DH24 114 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 ZEB2O60315 1214 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 KPNA6O60684 536 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 PLS3P13797 630 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 PEX3P56589 373 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 KLHL10Q6JEL2 608 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 MTHFD1LQ6UB35 978 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 KSR1Q8IVT5 923 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 METTL13Q8N6R0 699 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 CCDC47Q96A33 483 aaKnown RBP17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 ZNF668Q96K58 619 aaPredicted RBP17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 DRC1Q96MC2 740 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 RBSNQ9H1K0 784 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 IKZF4Q9H2S9 585 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 COL1A2P08123 1366 aa17.31■□□□□ 0.36
SFSWAP-206ENST00000537582 ADGRA3Q8IWK6 1321 aa17.31■□□□□ 0.36
SFSWAP-206ENST00000537582 GAP43P17677 238 aa17.31■□□□□ 0.36
SFSWAP-206ENST00000537582 GLRA2P23416 452 aa17.31■□□□□ 0.36
SFSWAP-206ENST00000537582 ARL2P36404 184 aa17.31■□□□□ 0.36
SFSWAP-206ENST00000537582 ZC2HC1CQ53FD0 456 aaPredicted RBP17.31■□□□□ 0.36
SFSWAP-206ENST00000537582 EFCAB12Q6NXP0 572 aa17.31■□□□□ 0.36
SFSWAP-206ENST00000537582 RUFY4Q6ZNE9 571 aa17.31■□□□□ 0.36
SFSWAP-206ENST00000537582 LINC01465Q8N7H1 131 aa17.31■□□□□ 0.36
SFSWAP-206ENST00000537582 ARMC5Q96C12 935 aa17.31■□□□□ 0.36
SFSWAP-206ENST00000537582 TIPINQ9BVW5 301 aa17.31■□□□□ 0.36
SFSWAP-206ENST00000537582 KATNAL1Q9BW62 490 aa17.31■□□□□ 0.36
SFSWAP-206ENST00000537582 MRPL44Q9H9J2 332 aaKnown RBP17.31■□□□□ 0.36
SFSWAP-206ENST00000537582 DNAH12Q6ZR08 3092 aa17.31■□□□□ 0.36
SFSWAP-206ENST00000537582 SLC16A4O15374 487 aa17.3■□□□□ 0.36
SFSWAP-206ENST00000537582 NPTX2P47972 431 aa17.3■□□□□ 0.36
SFSWAP-206ENST00000537582 STX17P56962 302 aa17.3■□□□□ 0.36
SFSWAP-206ENST00000537582 KCNA1Q09470 495 aa17.3■□□□□ 0.36
SFSWAP-206ENST00000537582 ADSSL1Q8N142 457 aa17.3■□□□□ 0.36
SFSWAP-206ENST00000537582 C7orf31Q8N865 590 aa17.3■□□□□ 0.36
SFSWAP-206ENST00000537582 MLKLQ8NB16 471 aa17.3■□□□□ 0.36
SFSWAP-206ENST00000537582 PCSK9Q8NBP7 692 aaKnown RBP17.3■□□□□ 0.36
SFSWAP-206ENST00000537582 SCFD1Q8WVM8 642 aa17.3■□□□□ 0.36
SFSWAP-206ENST00000537582 PRPF31Q8WWY3 499 aaKnown RBP17.3■□□□□ 0.36
SFSWAP-206ENST00000537582 KIFAP3Q92845 792 aa17.3■□□□□ 0.36
SFSWAP-206ENST00000537582 PPP1R16BQ96T49 567 aa17.3■□□□□ 0.36
SFSWAP-206ENST00000537582 CTNND2Q9UQB3 1225 aa17.3■□□□□ 0.36
SFSWAP-206ENST00000537582 PPME1Q9Y570 386 aa17.3■□□□□ 0.36
SFSWAP-206ENST00000537582 SCN10AQ9Y5Y9 1956 aa17.3■□□□□ 0.36
SFSWAP-206ENST00000537582 NRCAMQ92823 1304 aa17.29■□□□□ 0.36
SFSWAP-206ENST00000537582 TREHO43280 583 aa17.29■□□□□ 0.36
SFSWAP-206ENST00000537582 PRPF6O94906 941 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-206ENST00000537582 GCNT3O95395 438 aa17.29■□□□□ 0.36
SFSWAP-206ENST00000537582 HOXD13P35453 343 aa17.29■□□□□ 0.36
SFSWAP-206ENST00000537582 PMS1P54277 932 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-206ENST00000537582 ADAM17P78536 824 aa17.29■□□□□ 0.36
SFSWAP-206ENST00000537582 PSMD2Q13200 908 aa17.29■□□□□ 0.36
SFSWAP-206ENST00000537582 PKN2Q16513 984 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-206ENST00000537582 FAM47CQ5HY64 1035 aa17.29■□□□□ 0.36
SFSWAP-206ENST00000537582 NFRKBQ6P4R8 1299 aa17.29■□□□□ 0.36
SFSWAP-206ENST00000537582 NELFCDQ8IXH7 590 aa17.29■□□□□ 0.36
SFSWAP-206ENST00000537582 FAM178BQ8IXR5 827 aa17.29■□□□□ 0.36
SFSWAP-206ENST00000537582 CBX8Q9HC52 389 aa17.29■□□□□ 0.36
SFSWAP-206ENST00000537582 OLFML3Q9NRN5 406 aa17.29■□□□□ 0.36
SFSWAP-206ENST00000537582 SUCLA2Q9P2R7 463 aaPredicted RBP17.29■□□□□ 0.36
SFSWAP-206ENST00000537582 A0A1W2PQ45 241 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 A0A1W2PQY0 241 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 C17orf102A2RUQ5 167 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 TRIM49BA6NDI0 452 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 CCDC169A6NNP5 214 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 K7ENM7 598 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 HOXC8P31273 242 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 ZNF165P49910 485 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 CAPSQ13938 189 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 GDF6Q6KF10 455 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 EPM2AIP1Q7L775 607 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 ZNF720Q7Z2F6 126 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 LUZP1Q86V48 1076 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 ARRDC4Q8NCT1 418 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 VTI1AQ96AJ9 217 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 FAM49AQ9H0Q0 323 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 LARSQ9P2J5 1176 aaKnown RBP17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 MBLAC1A4D2B0 266 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 RRN3P2A6NIE6 340 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 VTNP04004 478 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 LAMTOR4Q0VGL1 99 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 RHPN2Q8IUC4 686 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 DHX40Q8IX18 779 aaKnown RBP17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 AOPEPQ8N6M6 819 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 NELFBQ8WX92 580 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 PSPC1Q8WXF1 523 aaKnown RBP17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 SEMA6BQ9H3T3 888 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 SEL1LQ9UBV2 794 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 GTF2IRD1Q9UHL9 959 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 OGDHLQ9ULD0 1010 aa17.28■□□□□ 0.36
SFSWAP-206ENST00000537582 MOXD2PA6NHM9 499 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 MAGEB2O15479 319 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 PPP1R37O75864 691 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 SRGAP2CP0DJJ0 459 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 NCKAP1LP55160 1127 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 RTP1P59025 263 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 TMEM62Q0P6H9 643 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 DMP1Q13316 513 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms