RNA–Protein interactions for RNA: ENST00000537488.1

ATN1-203, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 899 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-203ENST00000537488 SAMD11Q96NU1 681 aa18.39■□□□□ 0.53
ATN1-203ENST00000537488 NECAB3Q96P71 396 aaPredicted RBP18.39■□□□□ 0.53
ATN1-203ENST00000537488 LXNQ9BS40 222 aa18.39■□□□□ 0.53
ATN1-203ENST00000537488 CYP26B1Q9NR63 512 aa18.39■□□□□ 0.53
ATN1-203ENST00000537488 LRFN2Q9ULH4 789 aa18.39■□□□□ 0.53
ATN1-203ENST00000537488 A0A087WZ62 844 aa18.38■□□□□ 0.53
ATN1-203ENST00000537488 MAFO75444 373 aaPredicted RBP18.38■□□□□ 0.53
ATN1-203ENST00000537488 DARSP14868 501 aaKnown RBP18.38■□□□□ 0.53
ATN1-203ENST00000537488 EIF4BP23588 611 aaKnown RBP18.38■□□□□ 0.53
ATN1-203ENST00000537488 MCM7P33993 719 aa18.38■□□□□ 0.53
ATN1-203ENST00000537488 TXKP42681 527 aa18.38■□□□□ 0.53
ATN1-203ENST00000537488 RHPN2Q8IUC4 686 aa18.38■□□□□ 0.53
ATN1-203ENST00000537488 CLP1Q92989 425 aaKnown RBP18.38■□□□□ 0.53
ATN1-203ENST00000537488 ZSCAN31Q96LW9 406 aaPredicted RBP18.38■□□□□ 0.53
ATN1-203ENST00000537488 SCLT1Q96NL6 688 aa18.38■□□□□ 0.53
ATN1-203ENST00000537488 NAP1L4Q99733 375 aaKnown RBP18.38■□□□□ 0.53
ATN1-203ENST00000537488 FDXACB1Q9BRP7 624 aaPredicted RBP18.38■□□□□ 0.53
ATN1-203ENST00000537488 LLPHQ9BRT6 129 aaKnown RBP18.38■□□□□ 0.53
ATN1-203ENST00000537488 ALG13Q9NP73 1137 aaKnown RBP18.38■□□□□ 0.53
ATN1-203ENST00000537488 RNF19AQ9NV58 838 aa18.38■□□□□ 0.53
ATN1-203ENST00000537488 LMCD1Q9NZU5 365 aa18.38■□□□□ 0.53
ATN1-203ENST00000537488 SUCLA2Q9P2R7 463 aaPredicted RBP18.38■□□□□ 0.53
ATN1-203ENST00000537488 PCDHB7Q9Y5E2 793 aa18.38■□□□□ 0.53
ATN1-203ENST00000537488 SLITRK3O94933 977 aa18.37■□□□□ 0.53
ATN1-203ENST00000537488 BAG4O95429 457 aaKnown RBP18.37■□□□□ 0.53
ATN1-203ENST00000537488 STAG3L1P0CL83 205 aa18.37■□□□□ 0.53
ATN1-203ENST00000537488 DNAJB1P25685 340 aa18.37■□□□□ 0.53
ATN1-203ENST00000537488 FAM189BP81408 668 aa18.37■□□□□ 0.53
ATN1-203ENST00000537488 NBR1Q14596 966 aa18.37■□□□□ 0.53
ATN1-203ENST00000537488 ZNF174Q15697 407 aa18.37■□□□□ 0.53
ATN1-203ENST00000537488 SLC24A5Q71RS6 500 aa18.37■□□□□ 0.53
ATN1-203ENST00000537488 TPH2Q8IWU9 490 aa18.37■□□□□ 0.53
ATN1-203ENST00000537488 SLFN12Q8IYM2 578 aa18.37■□□□□ 0.53
ATN1-203ENST00000537488 CMTR2Q8IYT2 770 aaKnown RBP18.37■□□□□ 0.53
ATN1-203ENST00000537488 TMEM143Q96AN5 459 aa18.37■□□□□ 0.53
ATN1-203ENST00000537488 MRPL38Q96DV4 380 aaKnown RBP18.37■□□□□ 0.53
ATN1-203ENST00000537488 CEP170P1Q96L14 293 aa18.37■□□□□ 0.53
ATN1-203ENST00000537488 MTMR9Q96QG7 549 aa18.37■□□□□ 0.53
ATN1-203ENST00000537488 EIF2AK1Q9BQI3 630 aaKnown RBP18.37■□□□□ 0.53
ATN1-203ENST00000537488 TTC12Q9H892 705 aaPredicted RBP18.37■□□□□ 0.53
ATN1-203ENST00000537488 POTEMA6NI47 508 aa18.36■□□□□ 0.53
ATN1-203ENST00000537488 TBKBP1A7MCY6 615 aa18.36■□□□□ 0.53
ATN1-203ENST00000537488 C5orf67F2Z3F1 127 aa18.36■□□□□ 0.53
ATN1-203ENST00000537488 NEMFO60524 1076 aa18.36■□□□□ 0.53
ATN1-203ENST00000537488 BMP1P13497 986 aa18.36■□□□□ 0.53
ATN1-203ENST00000537488 YWHABP31946 246 aaKnown RBP18.36■□□□□ 0.53
ATN1-203ENST00000537488 CAMK1Q14012 370 aa18.36■□□□□ 0.53
ATN1-203ENST00000537488 TCEAL5Q5H9L2 206 aa18.36■□□□□ 0.53
ATN1-203ENST00000537488 C4orf19Q8IY42 314 aa18.36■□□□□ 0.53
ATN1-203ENST00000537488 FBXO18Q8NFZ0 1043 aa18.36■□□□□ 0.53
ATN1-203ENST00000537488 NLRP4Q96MN2 994 aa18.36■□□□□ 0.53
ATN1-203ENST00000537488 SH2B1Q9NRF2 756 aaPredicted RBP18.36■□□□□ 0.53
ATN1-203ENST00000537488 PCDHA12Q9UN75 941 aa18.36■□□□□ 0.53
ATN1-203ENST00000537488 ITGB1P05556 798 aa18.35■□□□□ 0.53
ATN1-203ENST00000537488 RABEP1Q15276 862 aa18.35■□□□□ 0.53
ATN1-203ENST00000537488 XKR9Q5GH70 373 aa18.35■□□□□ 0.53
ATN1-203ENST00000537488 ADAMTS19Q8TE59 1207 aa18.35■□□□□ 0.53
ATN1-203ENST00000537488 HLA-CQ95604 372 aa18.35■□□□□ 0.53
ATN1-203ENST00000537488 DHX33Q9H6R0 707 aaKnown RBP18.35■□□□□ 0.53
ATN1-203ENST00000537488 C1orf112Q9NSG2 853 aa18.35■□□□□ 0.53
ATN1-203ENST00000537488 PCDHGC5Q9Y5F6 944 aa18.35■□□□□ 0.53
ATN1-203ENST00000537488 GTF2F1P35269 517 aaKnown RBP eCLIP18.34■□□□□ 0.53
ATN1-203ENST00000537488 SAFBQ15424 915 aaKnown RBP eCLIP18.34■□□□□ 0.53
ATN1-203ENST00000537488 LONRF3Q496Y0 759 aa18.34■□□□□ 0.53
ATN1-203ENST00000537488 ODR4Q5SWX8 454 aa18.34■□□□□ 0.53
ATN1-203ENST00000537488 LRRC55Q6ZSA7 311 aa18.34■□□□□ 0.53
ATN1-203ENST00000537488 ECHDC2Q86YB7 292 aa18.34■□□□□ 0.53
ATN1-203ENST00000537488 FAM184AQ8NB25 1140 aa18.34■□□□□ 0.53
ATN1-203ENST00000537488 KLHL23Q8NBE8 558 aa18.34■□□□□ 0.53
ATN1-203ENST00000537488 RNF169Q8NCN4 708 aa18.34■□□□□ 0.53
ATN1-203ENST00000537488 HSD17B14Q9BPX1 270 aa18.34■□□□□ 0.53
ATN1-203ENST00000537488 GCOM2Q9BZD3 368 aaPredicted RBP18.34■□□□□ 0.53
ATN1-203ENST00000537488 ZSWIM4Q9H7M6 989 aa18.34■□□□□ 0.53
ATN1-203ENST00000537488 MINDY3Q9H8M7 445 aa18.34■□□□□ 0.53
ATN1-203ENST00000537488 XPNPEP1Q9NQW7 623 aa18.34■□□□□ 0.53
ATN1-203ENST00000537488 TYW1Q9NV66 732 aaKnown RBP18.34■□□□□ 0.53
ATN1-203ENST00000537488 PLAGL2Q9UPG8 496 aa18.34■□□□□ 0.53
ATN1-203ENST00000537488 TTC28Q96AY4 2481 aa18.34■□□□□ 0.53
ATN1-203ENST00000537488 RB1P06400 928 aa18.33■□□□□ 0.52
ATN1-203ENST00000537488 SRGAP2CP0DJJ0 459 aa18.33■□□□□ 0.52
ATN1-203ENST00000537488 ATF7P17544 494 aaPredicted RBP18.33■□□□□ 0.52
ATN1-203ENST00000537488 IRS1P35568 1242 aa18.33■□□□□ 0.52
ATN1-203ENST00000537488 DNM2P50570 870 aa18.33■□□□□ 0.52
ATN1-203ENST00000537488 POLGP54098 1239 aaPredicted RBP18.33■□□□□ 0.52
ATN1-203ENST00000537488 HMGN5P82970 282 aaKnown RBP18.33■□□□□ 0.52
ATN1-203ENST00000537488 PTPROQ16827 1216 aa18.33■□□□□ 0.52
ATN1-203ENST00000537488 SPPL3Q8TCT6 385 aa18.33■□□□□ 0.52
ATN1-203ENST00000537488 PIGOQ8TEQ8 1089 aa18.33■□□□□ 0.52
ATN1-203ENST00000537488 PRPF31Q8WWY3 499 aaKnown RBP18.33■□□□□ 0.52
ATN1-203ENST00000537488 SYMPKQ92797 1274 aaKnown RBP18.33■□□□□ 0.52
ATN1-203ENST00000537488 CASD1Q96PB1 797 aa18.33■□□□□ 0.52
ATN1-203ENST00000537488 C11orf84Q9BUA3 381 aaPredicted RBP18.33■□□□□ 0.52
ATN1-203ENST00000537488 CWH43Q9H720 699 aa18.33■□□□□ 0.52
ATN1-203ENST00000537488 UBE2ZQ9H832 354 aaPredicted RBP18.33■□□□□ 0.52
ATN1-203ENST00000537488 ATP6V0A4Q9HBG4 840 aa18.33■□□□□ 0.52
ATN1-203ENST00000537488 IFT122Q9HBG6 1241 aa18.33■□□□□ 0.52
ATN1-203ENST00000537488 TMEM161AQ9NX61 479 aa18.33■□□□□ 0.52
ATN1-203ENST00000537488 COL4A3BPQ9Y5P4 624 aa18.33■□□□□ 0.52
ATN1-203ENST00000537488 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.32■□□□□ 0.52
ATN1-203ENST00000537488 MEIS3P2A8K0S8 358 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms