RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 ZNF658Q5TYW1 1059 aaPredicted RBP12.75□□□□□ -0.37
CDCA3-206ENST00000536241 IER5Q5VY09 327 aa12.75□□□□□ -0.37
CDCA3-206ENST00000536241 NFRKBQ6P4R8 1299 aa12.75□□□□□ -0.37
CDCA3-206ENST00000536241 LRSAM1Q6UWE0 723 aa12.75□□□□□ -0.37
CDCA3-206ENST00000536241 SMYD4Q8IYR2 804 aaPredicted RBP12.75□□□□□ -0.37
CDCA3-206ENST00000536241 TRIML1Q8N9V2 468 aa12.75□□□□□ -0.37
CDCA3-206ENST00000536241 LMBR1Q8WVP7 490 aa12.75□□□□□ -0.37
CDCA3-206ENST00000536241 KIFAP3Q92845 792 aa12.75□□□□□ -0.37
CDCA3-206ENST00000536241 DRC1Q96MC2 740 aa12.75□□□□□ -0.37
CDCA3-206ENST00000536241 JPH2Q9BR39 696 aaPredicted RBP12.75□□□□□ -0.37
CDCA3-206ENST00000536241 CRISPLD2Q9H0B8 497 aa12.75□□□□□ -0.37
CDCA3-206ENST00000536241 POLR3FQ9H1D9 316 aaPredicted RBP12.75□□□□□ -0.37
CDCA3-206ENST00000536241 PARVGQ9HBI0 331 aa12.75□□□□□ -0.37
CDCA3-206ENST00000536241 PHF24Q9UPV7 400 aa12.75□□□□□ -0.37
CDCA3-206ENST00000536241 GDAQ9Y2T3 454 aa12.75□□□□□ -0.37
CDCA3-206ENST00000536241 PCDHA2Q9Y5H9 948 aa12.75□□□□□ -0.37
CDCA3-206ENST00000536241 CENPFP49454 3210 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 A0A1W2PQ45 241 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-206ENST00000536241 A0A1W2PQY0 241 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 DNM1LO00429 736 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 GNAT1P11488 350 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 PLS3P13797 630 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 GAP43P17677 238 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 CLCN3P51790 818 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 PEX3P56589 373 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 ZNF445P59923 1031 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 RETREG2Q8NC44 543 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 GLIS3Q8NEA6 775 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 PRPF31Q8WWY3 499 aaKnown RBP12.74□□□□□ -0.37
CDCA3-206ENST00000536241 BSNDQ8WZ55 320 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 FGFBP2Q9BYJ0 223 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 STARD7Q9NQZ5 370 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 LARSQ9P2J5 1176 aaKnown RBP12.74□□□□□ -0.37
CDCA3-206ENST00000536241 SUCLA2Q9P2R7 463 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-206ENST00000536241 GTF2IRD1Q9UHL9 959 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 MAPK8IP1Q9UQF2 711 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 TRIP12Q14669 1992 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-206ENST00000536241 ARID2Q68CP9 1835 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 HTTP42858 3142 aa12.74□□□□□ -0.37
CDCA3-206ENST00000536241 SCN10AQ9Y5Y9 1956 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 MBLAC1A4D2B0 266 aaPredicted RBP12.73□□□□□ -0.37
CDCA3-206ENST00000536241 GLRA2P23416 452 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 TMOD1P28289 359 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 NMT1P30419 496 aaKnown RBP12.73□□□□□ -0.37
CDCA3-206ENST00000536241 GJA8P48165 433 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 DNM2P50570 870 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 DPCR1Q3MIW9 517 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 FAM26FQ5R3K3 315 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 GDF6Q6KF10 455 aaPredicted RBP12.73□□□□□ -0.37
CDCA3-206ENST00000536241 ZNF720Q7Z2F6 126 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 KSR1Q8IVT5 923 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 KIAA0319LQ8IZA0 1049 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 LINC01465Q8N7H1 131 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 KIAA0895Q8NCT3 520 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 ASAP3Q8TDY4 903 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 TCP11Q8WWU5 503 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 FIZ1Q96SL8 496 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 NTPCRQ9BSD7 190 aaKnown RBP12.73□□□□□ -0.37
CDCA3-206ENST00000536241 TMEM106CQ9BVX2 250 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 MRPL44Q9H9J2 332 aaKnown RBP12.73□□□□□ -0.37
CDCA3-206ENST00000536241 ANO10Q9NW15 660 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 MYH11P35749 1972 aa12.73□□□□□ -0.37
CDCA3-206ENST00000536241 FRMPD3Q5JV73 1810 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 CCDC169A6NNP5 214 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 PPP1R3GB7ZBB8 358 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 GAS2O43903 313 aaKnown RBP12.72□□□□□ -0.37
CDCA3-206ENST00000536241 SRGAP2CP0DJJ0 459 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 CYP2C9P11712 490 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 CD44P16070 742 aaKnown RBP12.72□□□□□ -0.37
CDCA3-206ENST00000536241 HOXC8P31273 242 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 PRCPP42785 496 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 NPTX2P47972 431 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 MNX1P50219 401 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-206ENST00000536241 RTP1P59025 263 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 STX1AQ16623 288 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 ZC2HC1CQ53FD0 456 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-206ENST00000536241 RUFY4Q6ZNE9 571 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 SESTD1Q86VW0 696 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 RHPN2Q8IUC4 686 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 FAM178BQ8IXR5 827 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 ZNF668Q96K58 619 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-206ENST00000536241 IFT74Q96LB3 600 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 SENP6Q9GZR1 1112 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-206ENST00000536241 C17orf75Q9HAS0 396 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 OLFML3Q9NRN5 406 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 SEL1LQ9UBV2 794 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 SMIM35A0A1B0GVV1 85 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 ARVCFO00192 962 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 SLC16A4O15374 487 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 PRPF6O94906 941 aaKnown RBP12.72□□□□□ -0.37
CDCA3-206ENST00000536241 GCNT3O95395 438 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 VTNP04004 478 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 CASP5P51878 434 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 SMTNP53814 917 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 LAMTOR4Q0VGL1 99 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 DMP1Q13316 513 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-206ENST00000536241 MXD4Q14582 209 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-206ENST00000536241 PTGISQ16647 500 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 ANO6Q4KMQ2 910 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 C11orf57Q6ZUT1 292 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms