RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 DLGAP5Q15398 846 aa5.19□□□□□ -1.58
YBX3-205ENST00000536107 TTLL7Q6ZT98 887 aa5.19□□□□□ -1.58
YBX3-205ENST00000536107 TMEM52Q8NDY8 209 aa5.19□□□□□ -1.58
YBX3-205ENST00000536107 TIFAQ96CG3 184 aa5.19□□□□□ -1.58
YBX3-205ENST00000536107 RNPC3Q96LT9 517 aaKnown RBP5.19□□□□□ -1.58
YBX3-205ENST00000536107 CDK5RAP1Q96SZ6 601 aaKnown RBP5.19□□□□□ -1.58
YBX3-205ENST00000536107 CDADC1Q9BWV3 514 aa5.19□□□□□ -1.58
YBX3-205ENST00000536107 PRDM12Q9H4Q4 367 aa5.19□□□□□ -1.58
YBX3-205ENST00000536107 ZCCHC17Q9NP64 241 aaKnown RBP5.19□□□□□ -1.58
YBX3-205ENST00000536107 PPP2R3BQ9Y5P8 575 aa5.19□□□□□ -1.58
YBX3-205ENST00000536107 COL2A1P02458 1487 aaPredicted RBP5.19□□□□□ -1.58
YBX3-205ENST00000536107 CLRN2A0PK11 232 aa5.18□□□□□ -1.58
YBX3-205ENST00000536107 PI4K2BG5E9Z4 385 aa5.18□□□□□ -1.58
YBX3-205ENST00000536107 PDHXO00330 501 aa5.18□□□□□ -1.58
YBX3-205ENST00000536107 ASGR2P07307 311 aa5.18□□□□□ -1.58
YBX3-205ENST00000536107 VGLL4Q14135 290 aa5.18□□□□□ -1.58
YBX3-205ENST00000536107 KCTD2Q14681 263 aa5.18□□□□□ -1.58
YBX3-205ENST00000536107 GLB1LQ6UWU2 654 aa5.18□□□□□ -1.58
YBX3-205ENST00000536107 ERMP1Q7Z2K6 904 aa5.18□□□□□ -1.58
YBX3-205ENST00000536107 KIAA0825Q8IV33 1275 aa5.18□□□□□ -1.58
YBX3-205ENST00000536107 ZNF34Q8IZ26 560 aa5.18□□□□□ -1.58
YBX3-205ENST00000536107 IL17REQ8NFR9 667 aa5.18□□□□□ -1.58
YBX3-205ENST00000536107 CELF1Q92879 486 aaKnown RBP5.18□□□□□ -1.58
YBX3-205ENST00000536107 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.18□□□□□ -1.58
YBX3-205ENST00000536107 KCNH6Q9H252 994 aa5.18□□□□□ -1.58
YBX3-205ENST00000536107 SPATA6Q9NWH7 488 aaPredicted RBP5.18□□□□□ -1.58
YBX3-205ENST00000536107 CDH23Q9H251 3354 aa5.18□□□□□ -1.58
YBX3-205ENST00000536107 PFASO15067 1338 aa5.18□□□□□ -1.58
YBX3-205ENST00000536107 MYO3BQ8WXR4 1341 aa5.18□□□□□ -1.58
YBX3-205ENST00000536107 A0A1W2PQ27 194 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 A0A1W2PQ64 194 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 A0A1W2PQC6 194 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 A0A1W2PQD8 194 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 FAM221AA4D161 298 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 DNAJA2O60884 412 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 UBOX5O94941 541 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 HTR3BO95264 441 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 MC3RP41968 323 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 PRR5P85299 388 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 KLF10Q13118 480 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 COL9A2Q14055 689 aaPredicted RBP5.17□□□□□ -1.58
YBX3-205ENST00000536107 RASA3Q14644 834 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 CCDC129Q6ZRS4 1044 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 LGI4Q8N135 537 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 ADAMTS17Q8TE56 1095 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 BADQ92934 168 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 ZNF428Q96B54 188 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 COA7Q96BR5 231 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 TESK2Q96S53 571 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 SENP6Q9GZR1 1112 aaPredicted RBP5.17□□□□□ -1.58
YBX3-205ENST00000536107 CHST7Q9NS84 486 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 TRMT112Q9UI30 125 aaKnown RBP5.17□□□□□ -1.58
YBX3-205ENST00000536107 OGDHLQ9ULD0 1010 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 TLR6Q9Y2C9 796 aa5.17□□□□□ -1.58
YBX3-205ENST00000536107 ZNF646O15015 1829 aaPredicted RBP5.17□□□□□ -1.58
YBX3-205ENST00000536107 COL1A1P02452 1464 aaPredicted RBP5.16□□□□□ -1.58
YBX3-205ENST00000536107 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.16□□□□□ -1.58
YBX3-205ENST00000536107 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.16□□□□□ -1.58
YBX3-205ENST00000536107 AMHP03971 560 aa5.16□□□□□ -1.58
YBX3-205ENST00000536107 HMGCRP04035 888 aa5.16□□□□□ -1.58
YBX3-205ENST00000536107 EIF4BP23588 611 aaKnown RBP5.16□□□□□ -1.58
YBX3-205ENST00000536107 IL13P35225 146 aa5.16□□□□□ -1.58
YBX3-205ENST00000536107 MMP14P50281 582 aa5.16□□□□□ -1.58
YBX3-205ENST00000536107 RBM5P52756 815 aaKnown RBP eCLIP5.16□□□□□ -1.58
YBX3-205ENST00000536107 DACT2Q5SW24 774 aa5.16□□□□□ -1.58
YBX3-205ENST00000536107 ANKRD23Q86SG2 305 aa5.16□□□□□ -1.58
YBX3-205ENST00000536107 PARK7Q99497 189 aaKnown RBP5.16□□□□□ -1.58
YBX3-205ENST00000536107 C1orf115Q9H7X2 142 aa5.16□□□□□ -1.58
YBX3-205ENST00000536107 AP5S1Q9NUS5 200 aa5.16□□□□□ -1.58
YBX3-205ENST00000536107 INVSQ9Y283 1065 aa5.16□□□□□ -1.58
YBX3-205ENST00000536107 ATP11BQ9Y2G3 1177 aa5.16□□□□□ -1.58
YBX3-205ENST00000536107 HS3ST3A1Q9Y663 406 aa5.16□□□□□ -1.58
YBX3-205ENST00000536107 SH3TC1Q8TE82 1336 aa5.16□□□□□ -1.58
YBX3-205ENST00000536107 F8W031 263 aaPredicted RBP5.15□□□□□ -1.59
YBX3-205ENST00000536107 CYP2C8P10632 490 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 ALADP13716 330 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 VAV1P15498 845 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 RPS8P62241 208 aaKnown RBP5.15□□□□□ -1.59
YBX3-205ENST00000536107 STRIP1Q5VSL9 837 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 HLA-DQA1Q5Y7H0 255 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 TTLL5Q6EMB2 1281 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 BNC2Q6ZN30 1099 aaPredicted RBP5.15□□□□□ -1.59
YBX3-205ENST00000536107 ZNF575Q86XF7 245 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 ERO1BQ86YB8 467 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.15□□□□□ -1.59
YBX3-205ENST00000536107 PHC3Q8NDX5 983 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 GATAD2BQ8WXI9 593 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 POLR3GLQ9BT43 218 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 KLC2Q9H0B6 622 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 ANTXR1Q9H6X2 564 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 PDLIM7Q9NR12 457 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 C11orf21Q9P2W6 132 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 ING1Q9UK53 422 aaPredicted RBP5.15□□□□□ -1.59
YBX3-205ENST00000536107 MINPP1Q9UNW1 487 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 SSC5DA1L4H1 1573 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 DUOX1Q9NRD9 1551 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 ZNF804BA4D1E1 1349 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 NCOR1O75376 2440 aa5.15□□□□□ -1.59
YBX3-205ENST00000536107 CHD8Q9HCK8 2581 aa5.14□□□□□ -1.59
YBX3-205ENST00000536107 A0A1W2PQJ5 194 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms