RNA–Protein interactions for RNA: ENST00000536034.1

LINC02449-203, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 451 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-203ENST00000536034 ARHGEF35A5YM69 484 aa16.8■□□□□ 0.28
LINC02449-203ENST00000536034 PP2D1A8MPX8 630 aa16.8■□□□□ 0.28
LINC02449-203ENST00000536034 MXD4Q14582 209 aaPredicted RBP16.8■□□□□ 0.28
LINC02449-203ENST00000536034 PTPAQ15257 358 aa16.8■□□□□ 0.28
LINC02449-203ENST00000536034 FAM173BQ6P4H8 233 aa16.8■□□□□ 0.28
LINC02449-203ENST00000536034 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC02449-203ENST00000536034 RHPN2Q8IUC4 686 aa16.8■□□□□ 0.28
LINC02449-203ENST00000536034 MCPH1Q8NEM0 835 aa16.8■□□□□ 0.28
LINC02449-203ENST00000536034 TIFAQ96CG3 184 aa16.8■□□□□ 0.28
LINC02449-203ENST00000536034 ZNF396Q96N95 335 aaPredicted RBP16.8■□□□□ 0.28
LINC02449-203ENST00000536034 PPP1R16BQ96T49 567 aa16.8■□□□□ 0.28
LINC02449-203ENST00000536034 MMTAG2Q9BU76 263 aaKnown RBP16.8■□□□□ 0.28
LINC02449-203ENST00000536034 GCOM2Q9BZD3 368 aaPredicted RBP16.8■□□□□ 0.28
LINC02449-203ENST00000536034 XPNPEP1Q9NQW7 623 aa16.8■□□□□ 0.28
LINC02449-203ENST00000536034 DDX19AQ9NUU7 478 aaKnown RBP16.8■□□□□ 0.28
LINC02449-203ENST00000536034 ST3GAL5Q9UNP4 418 aa16.8■□□□□ 0.28
LINC02449-203ENST00000536034 KIAA1024Q9UPX6 916 aa16.8■□□□□ 0.28
LINC02449-203ENST00000536034 DNM3Q9UQ16 869 aa16.8■□□□□ 0.28
LINC02449-203ENST00000536034 ARID2Q68CP9 1835 aa16.8■□□□□ 0.28
LINC02449-203ENST00000536034 CHD9Q3L8U1 2897 aa16.79■□□□□ 0.28
LINC02449-203ENST00000536034 ENPP3O14638 875 aa16.79■□□□□ 0.28
LINC02449-203ENST00000536034 GJB5O95377 273 aa16.79■□□□□ 0.28
LINC02449-203ENST00000536034 CDC25AP30304 524 aa16.79■□□□□ 0.28
LINC02449-203ENST00000536034 POU5F1BQ06416 359 aa16.79■□□□□ 0.28
LINC02449-203ENST00000536034 LAMTOR4Q0VGL1 99 aa16.79■□□□□ 0.28
LINC02449-203ENST00000536034 NFX1Q12986 1120 aaKnown RBP16.79■□□□□ 0.28
LINC02449-203ENST00000536034 ECM1Q16610 540 aa16.79■□□□□ 0.28
LINC02449-203ENST00000536034 ZNF697Q5TEC3 545 aa16.79■□□□□ 0.28
LINC02449-203ENST00000536034 FAM228AQ86W67 206 aa16.79■□□□□ 0.28
LINC02449-203ENST00000536034 TOP1MTQ969P6 601 aa16.79■□□□□ 0.28
LINC02449-203ENST00000536034 TMEM143Q96AN5 459 aa16.79■□□□□ 0.28
LINC02449-203ENST00000536034 RAD9AQ99638 391 aa16.79■□□□□ 0.28
LINC02449-203ENST00000536034 ZBED2Q9BTP6 218 aa16.79■□□□□ 0.28
LINC02449-203ENST00000536034 TSPYL2Q9H2G4 693 aaPredicted RBP16.79■□□□□ 0.28
LINC02449-203ENST00000536034 RNF216Q9NWF9 866 aaPredicted RBP16.79■□□□□ 0.28
LINC02449-203ENST00000536034 SRPRBQ9Y5M8 271 aaKnown RBP16.79■□□□□ 0.28
LINC02449-203ENST00000536034 A0A087WWV3 80 aa16.78■□□□□ 0.28
LINC02449-203ENST00000536034 A0A087WZ62 844 aa16.78■□□□□ 0.28
LINC02449-203ENST00000536034 TLL1O43897 1013 aa16.78■□□□□ 0.28
LINC02449-203ENST00000536034 USO1O60763 962 aaKnown RBP16.78■□□□□ 0.28
LINC02449-203ENST00000536034 EYA4O95677 639 aa16.78■□□□□ 0.28
LINC02449-203ENST00000536034 F13A1P00488 732 aa16.78■□□□□ 0.28
LINC02449-203ENST00000536034 PBX2P40425 430 aa16.78■□□□□ 0.28
LINC02449-203ENST00000536034 UBA7P41226 1012 aa16.78■□□□□ 0.28
LINC02449-203ENST00000536034 NASPP49321 788 aaPredicted RBP16.78■□□□□ 0.28
LINC02449-203ENST00000536034 SLC39A14Q15043 492 aa16.78■□□□□ 0.28
LINC02449-203ENST00000536034 ATL3Q6DD88 541 aa16.78■□□□□ 0.28
LINC02449-203ENST00000536034 PADI6Q6TGC4 694 aa16.78■□□□□ 0.28
LINC02449-203ENST00000536034 MYOCDQ8IZQ8 938 aa16.78■□□□□ 0.28
LINC02449-203ENST00000536034 NLRP4Q96MN2 994 aa16.78■□□□□ 0.28
LINC02449-203ENST00000536034 USP28Q96RU2 1077 aa16.78■□□□□ 0.28
LINC02449-203ENST00000536034 FDXACB1Q9BRP7 624 aaPredicted RBP16.78■□□□□ 0.28
LINC02449-203ENST00000536034 TMX1Q9H3N1 280 aa16.78■□□□□ 0.28
LINC02449-203ENST00000536034 MICAL3Q7RTP6 2002 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 CYP11B2P19099 503 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 SFPQP23246 707 aaKnown RBP eCLIP16.77■□□□□ 0.28
LINC02449-203ENST00000536034 ARL2P36404 184 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 RABGGTBP53611 331 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 TFDP1Q14186 410 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 SRGAP1Q7Z6B7 1085 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 CABP7Q86V35 215 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 KSR1Q8IVT5 923 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 DEFB123Q8N688 67 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 LINC01599Q8WXQ3 324 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 CALML4Q96GE6 196 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 CDK5RAP3Q96JB5 506 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 ZNF668Q96K58 619 aaPredicted RBP16.77■□□□□ 0.28
LINC02449-203ENST00000536034 BHMT2Q9H2M3 363 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 SLC28A3Q9HAS3 691 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 IFT122Q9HBG6 1241 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 C1orf112Q9NSG2 853 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 BMP2KQ9NSY1 1161 aaPredicted RBP16.77■□□□□ 0.28
LINC02449-203ENST00000536034 FBXO2Q9UK22 296 aaPredicted RBP16.77■□□□□ 0.28
LINC02449-203ENST00000536034 YBX2Q9Y2T7 364 aaKnown RBP16.77■□□□□ 0.28
LINC02449-203ENST00000536034 INSL6Q9Y581 213 aa16.77■□□□□ 0.28
LINC02449-203ENST00000536034 DENND3A2RUS2 1198 aa16.76■□□□□ 0.27
LINC02449-203ENST00000536034 YEATS4O95619 227 aa16.76■□□□□ 0.27
LINC02449-203ENST00000536034 SRGAP2CP0DJJ0 459 aa16.76■□□□□ 0.27
LINC02449-203ENST00000536034 PHKA2P46019 1235 aa16.76■□□□□ 0.27
LINC02449-203ENST00000536034 HTRA4P83105 476 aaPredicted RBP16.76■□□□□ 0.27
LINC02449-203ENST00000536034 CEBPZQ03701 1054 aaKnown RBP16.76■□□□□ 0.27
LINC02449-203ENST00000536034 GRB10Q13322 594 aa16.76■□□□□ 0.27
LINC02449-203ENST00000536034 DSC3Q14574 896 aa16.76■□□□□ 0.27
LINC02449-203ENST00000536034 PCBP1Q15365 356 aaKnown RBP eCLIP16.76■□□□□ 0.27
LINC02449-203ENST00000536034 TMEM119Q4V9L6 283 aa16.76■□□□□ 0.27
LINC02449-203ENST00000536034 RTN4RL1Q86UN2 441 aaPredicted RBP16.76■□□□□ 0.27
LINC02449-203ENST00000536034 ADAM2Q99965 735 aa16.76■□□□□ 0.27
LINC02449-203ENST00000536034 NFKBIZQ9BYH8 718 aa16.76■□□□□ 0.27
LINC02449-203ENST00000536034 SEMA6BQ9H3T3 888 aa16.76■□□□□ 0.27
LINC02449-203ENST00000536034 CHST12Q9NRB3 414 aa16.76■□□□□ 0.27
LINC02449-203ENST00000536034 RGS18Q9NS28 235 aa16.76■□□□□ 0.27
LINC02449-203ENST00000536034 E9PMD0 336 aa16.75■□□□□ 0.27
LINC02449-203ENST00000536034 BRD1O95696 1058 aa16.75■□□□□ 0.27
LINC02449-203ENST00000536034 STAG3L1P0CL83 205 aa16.75■□□□□ 0.27
LINC02449-203ENST00000536034 ZSCAN20P17040 1043 aaPredicted RBP16.75■□□□□ 0.27
LINC02449-203ENST00000536034 MARCKSP29966 332 aaPredicted RBP16.75■□□□□ 0.27
LINC02449-203ENST00000536034 SARSP49591 514 aaKnown RBP16.75■□□□□ 0.27
LINC02449-203ENST00000536034 GRIN1Q05586 938 aa16.75■□□□□ 0.27
LINC02449-203ENST00000536034 PKP1Q13835 747 aa16.75■□□□□ 0.27
LINC02449-203ENST00000536034 STK38Q15208 465 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms