RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ESYT2A0FGR8 921 aa14.66□□□□□ -0.06
TNFRSF1A-207ENST00000535958 ZBTB42B2RXF5 422 aa14.66□□□□□ -0.06
TNFRSF1A-207ENST00000535958 DHX15O43143 795 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-207ENST00000535958 GPR32O75388 356 aa14.66□□□□□ -0.06
TNFRSF1A-207ENST00000535958 EXOSC10Q01780 885 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-207ENST00000535958 VN1R2Q8NFZ6 395 aa14.66□□□□□ -0.06
TNFRSF1A-207ENST00000535958 RASGRP4Q8TDF6 673 aa14.66□□□□□ -0.06
TNFRSF1A-207ENST00000535958 NLRP7Q8WX94 980 aa14.66□□□□□ -0.06
TNFRSF1A-207ENST00000535958 DACT1Q9NYF0 836 aa14.66□□□□□ -0.06
TNFRSF1A-207ENST00000535958 SPG21Q9NZD8 308 aa14.66□□□□□ -0.06
TNFRSF1A-207ENST00000535958 SPDYE4A6NLX3 237 aa14.65□□□□□ -0.06
TNFRSF1A-207ENST00000535958 CHMP2AO43633 222 aa14.65□□□□□ -0.06
TNFRSF1A-207ENST00000535958 OATP04181 439 aa14.65□□□□□ -0.06
TNFRSF1A-207ENST00000535958 ATP4AP20648 1035 aa14.65□□□□□ -0.06
TNFRSF1A-207ENST00000535958 EIF4BP23588 611 aaKnown RBP14.65□□□□□ -0.06
TNFRSF1A-207ENST00000535958 CDC27P30260 824 aa14.65□□□□□ -0.06
TNFRSF1A-207ENST00000535958 FAM189BP81408 668 aa14.65□□□□□ -0.06
TNFRSF1A-207ENST00000535958 TBC1D8BQ0IIM8 1120 aa14.65□□□□□ -0.06
TNFRSF1A-207ENST00000535958 BMP2KLQ5H9B9 411 aa14.65□□□□□ -0.06
TNFRSF1A-207ENST00000535958 TMEM184AQ6ZMB5 413 aa14.65□□□□□ -0.06
TNFRSF1A-207ENST00000535958 LRRC71Q8N4P6 559 aa14.65□□□□□ -0.06
TNFRSF1A-207ENST00000535958 TMEM169Q96HH4 297 aa14.65□□□□□ -0.06
TNFRSF1A-207ENST00000535958 NECTIN4Q96NY8 510 aa14.65□□□□□ -0.06
TNFRSF1A-207ENST00000535958 CASD1Q96PB1 797 aa14.65□□□□□ -0.06
TNFRSF1A-207ENST00000535958 ZMYND12Q9H0C1 365 aa14.65□□□□□ -0.06
TNFRSF1A-207ENST00000535958 WDFY4Q6ZS81 3184 aa14.65□□□□□ -0.06
TNFRSF1A-207ENST00000535958 HIDE1A8MVS5 230 aa14.64□□□□□ -0.07
TNFRSF1A-207ENST00000535958 GAS7O60861 476 aa14.64□□□□□ -0.07
TNFRSF1A-207ENST00000535958 ADD1P35611 737 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1A-207ENST00000535958 PBX3P40426 434 aa14.64□□□□□ -0.07
TNFRSF1A-207ENST00000535958 ALDH7A1P49419 539 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1A-207ENST00000535958 JAK3P52333 1124 aa14.64□□□□□ -0.07
TNFRSF1A-207ENST00000535958 PRKCEQ02156 737 aa14.64□□□□□ -0.07
TNFRSF1A-207ENST00000535958 MTMR3Q13615 1198 aa14.64□□□□□ -0.07
TNFRSF1A-207ENST00000535958 DSC3Q14574 896 aa14.64□□□□□ -0.07
TNFRSF1A-207ENST00000535958 ADCK5Q3MIX3 580 aa14.64□□□□□ -0.07
TNFRSF1A-207ENST00000535958 IER5LQ5T953 404 aa14.64□□□□□ -0.07
TNFRSF1A-207ENST00000535958 ECHDC2Q86YB7 292 aa14.64□□□□□ -0.07
TNFRSF1A-207ENST00000535958 HELQQ8TDG4 1101 aa14.64□□□□□ -0.07
TNFRSF1A-207ENST00000535958 ZNF668Q96K58 619 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF1A-207ENST00000535958 TEKT3Q9BXF9 490 aa14.64□□□□□ -0.07
TNFRSF1A-207ENST00000535958 DISC1Q9NRI5 854 aa14.64□□□□□ -0.07
TNFRSF1A-207ENST00000535958 CARNS1A5YM72 827 aa14.63□□□□□ -0.07
TNFRSF1A-207ENST00000535958 SFNP31947 248 aa14.63□□□□□ -0.07
TNFRSF1A-207ENST00000535958 GPC3P51654 580 aa14.63□□□□□ -0.07
TNFRSF1A-207ENST00000535958 ITIH3Q06033 890 aa14.63□□□□□ -0.07
TNFRSF1A-207ENST00000535958 RSPH1Q8WYR4 309 aa14.63□□□□□ -0.07
TNFRSF1A-207ENST00000535958 ATOH1Q92858 354 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF1A-207ENST00000535958 RIPOR3Q96MK2 946 aa14.63□□□□□ -0.07
TNFRSF1A-207ENST00000535958 GCOM2Q9BZD3 368 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF1A-207ENST00000535958 S1PR5Q9H228 398 aa14.63□□□□□ -0.07
TNFRSF1A-207ENST00000535958 SEPT9Q9UHD8 586 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF1A-207ENST00000535958 KMT2EQ8IZD2 1858 aa14.63□□□□□ -0.07
TNFRSF1A-207ENST00000535958 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 PRPF3O43395 683 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 ST18O60284 1047 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 ZC3H11AO75152 810 aaKnown RBP eCLIP14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 CDC45O75419 566 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 EOMESO95936 686 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 DARSP14868 501 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 SFPQP23246 707 aaKnown RBP eCLIP14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 MTHFRP42898 656 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 DNM2P50570 870 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 CDC42EP1Q00587 391 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 TSGA10IPQ3SY00 556 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 LRCH2Q5VUJ6 765 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 SYCE2Q6PIF2 218 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 BLOC1S2Q6QNY1 142 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 LRRC55Q6ZSA7 311 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 Q6ZUG5 572 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 UBALD2Q8IYN6 164 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 TDRD5Q8NAT2 981 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 CRYGNQ8WXF5 182 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 BRF1Q92994 677 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 CCDC136Q96JN2 1154 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 PHOX2BQ99453 314 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 ADAMTS10Q9H324 1103 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 FAM217BQ9NTX9 383 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 DZANK1Q9NVP4 752 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 SORCS3Q9UPU3 1222 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 HCFC2Q9Y5Z7 792 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 TRIOO75962 3097 aa14.62□□□□□ -0.07
TNFRSF1A-207ENST00000535958 A0A0U1RQF3 1178 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 SKIP12755 728 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 AVPR2P30518 371 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 CIITAP33076 1130 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 VCPP55072 806 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 RNASELQ05823 741 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 TCF15Q12870 199 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 MTERF2Q49AM1 385 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 CLLU1OSQ5K130 101 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 TWF2Q6IBS0 349 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 MIER3Q7Z3K6 550 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 RASEFQ8IZ41 740 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 SLC39A11Q8N1S5 342 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 KREMEN2Q8NCW0 462 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 PHKBQ93100 1093 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 ASIC4Q96FT7 647 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 JAKMIP1Q96N16 626 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 RIT2Q99578 217 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms