RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 HOXA2O43364 376 aa21.16■□□□□ 0.98
NDUFS3-213ENST00000534716 IL9P15248 144 aa21.16■□□□□ 0.98
NDUFS3-213ENST00000534716 ZSCAN20P17040 1043 aaPredicted RBP21.16■□□□□ 0.98
NDUFS3-213ENST00000534716 PSMC5P62195 406 aa21.16■□□□□ 0.98
NDUFS3-213ENST00000534716 CSPP1Q1MSJ5 1256 aa21.16■□□□□ 0.98
NDUFS3-213ENST00000534716 ANO5Q75V66 913 aa21.16■□□□□ 0.98
NDUFS3-213ENST00000534716 OXER1Q8TDS5 423 aa21.16■□□□□ 0.98
NDUFS3-213ENST00000534716 PPP2R3CQ969Q6 453 aa21.16■□□□□ 0.98
NDUFS3-213ENST00000534716 ORC3Q9UBD5 711 aaPredicted RBP21.16■□□□□ 0.98
NDUFS3-213ENST00000534716 SEPT9Q9UHD8 586 aaPredicted RBP21.16■□□□□ 0.98
NDUFS3-213ENST00000534716 PCDHB12Q9Y5F1 795 aa21.16■□□□□ 0.98
NDUFS3-213ENST00000534716 MAFO75444 373 aaPredicted RBP21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 FDPSP14324 419 aaKnown RBP21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 DNM2P50570 870 aa21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 ADAM15Q13444 863 aa21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 DRP2Q13474 957 aa21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 ME3Q16798 604 aa21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 MTERF2Q49AM1 385 aa21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 GJD3Q8N144 294 aa21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 HAS1Q92839 578 aa21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 GTF3C6Q969F1 213 aa21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 JPH2Q9BR39 696 aaPredicted RBP21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 TMEM117Q9H0C3 514 aa21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 CWH43Q9H720 699 aa21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 GJB4Q9NTQ9 266 aa21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 TYW1Q9NV66 732 aaKnown RBP21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 PRKAG3Q9UGI9 489 aa21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 PPME1Q9Y570 386 aa21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 EVPLQ92817 2033 aa21.15■□□□□ 0.98
NDUFS3-213ENST00000534716 A0A0U1RQF3 1178 aa21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 TMEM150BA6NC51 233 aa21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 PI4K2BG5E9Z4 385 aa21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 EML1O00423 815 aa21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 DKC1O60832 514 aaKnown RBP eCLIP21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 FGFR1P11362 822 aa21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 QARSP47897 775 aaKnown RBP21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 PIK3AP1Q6ZUJ8 805 aa21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 ZNF410Q86VK4 478 aa21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 ECHDC2Q86YB7 292 aa21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 NLRP7Q8WX94 980 aa21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 KHSRPQ92945 711 aaKnown RBP eCLIP21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 TNFRSF25Q93038 417 aa21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 CASD1Q96PB1 797 aa21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 TRAIPQ9BWF2 469 aa21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 GCOM2Q9BZD3 368 aaPredicted RBP21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 CHST12Q9NRB3 414 aa21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 RNF19AQ9NV58 838 aa21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 ATG2AQ2TAZ0 1938 aa21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 WDR81Q562E7 1941 aa21.14■□□□□ 0.97
NDUFS3-213ENST00000534716 DDX11L8A8MPP1 907 aa21.13■□□□□ 0.97
NDUFS3-213ENST00000534716 CCNT1O60563 726 aaKnown RBP21.13■□□□□ 0.97
NDUFS3-213ENST00000534716 EOMESO95936 686 aa21.13■□□□□ 0.97
NDUFS3-213ENST00000534716 P4HBP07237 508 aaKnown RBP21.13■□□□□ 0.97
NDUFS3-213ENST00000534716 IRS1P35568 1242 aa21.13■□□□□ 0.97
NDUFS3-213ENST00000534716 EFHBQ8N7U6 833 aa21.13■□□□□ 0.97
NDUFS3-213ENST00000534716 COLGALT1Q8NBJ5 622 aa21.13■□□□□ 0.97
NDUFS3-213ENST00000534716 EPHX3Q9H6B9 360 aa21.13■□□□□ 0.97
NDUFS3-213ENST00000534716 LZTS1Q9Y250 596 aa21.13■□□□□ 0.97
NDUFS3-213ENST00000534716 KIAA1671Q9BY89 1806 aa21.13■□□□□ 0.97
NDUFS3-213ENST00000534716 FGF18O76093 207 aa21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 LAG3P18627 525 aa21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 IBSPP21815 317 aaPredicted RBP21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 GTF2F1P35269 517 aaKnown RBP eCLIP21.12■□□□□ 0.975e-6■■□□□ 13.8
NDUFS3-213ENST00000534716 KRT2P35908 639 aa21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 DLX2Q07687 328 aaPredicted RBP21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 SMAD2Q15796 467 aaKnown RBP21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 EARS2Q5JPH6 523 aaKnown RBP21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 SPOUT1Q5T280 376 aaKnown RBP21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 PDE12Q6L8Q7 609 aaKnown RBP21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 LRRC55Q6ZSA7 311 aa21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 EP400NLQ6ZTU2 488 aa21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 ZNF598Q86UK7 904 aaKnown RBP21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 EXOC8Q8IYI6 725 aa21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 SLFN12Q8IYM2 578 aa21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 NECAB1Q8N987 351 aa21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 RSPH1Q8WYR4 309 aa21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 ZNF668Q96K58 619 aaPredicted RBP21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 SCLT1Q96NL6 688 aa21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 INO80BQ9C086 356 aaPredicted RBP21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 CYP26B1Q9NR63 512 aa21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 DACT1Q9NYF0 836 aa21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 SUCLA2Q9P2R7 463 aaPredicted RBP21.12■□□□□ 0.97
NDUFS3-213ENST00000534716 FNDC1Q4ZHG4 1894 aaPredicted RBP21.11■□□□□ 0.97
NDUFS3-213ENST00000534716 C19orf67A6NJJ6 358 aa21.11■□□□□ 0.97
NDUFS3-213ENST00000534716 LINC01565O15544 149 aa21.11■□□□□ 0.97
NDUFS3-213ENST00000534716 TBX10O75333 385 aa21.11■□□□□ 0.97
NDUFS3-213ENST00000534716 PLCB3Q01970 1234 aa21.11■□□□□ 0.97
NDUFS3-213ENST00000534716 SPIRE1Q08AE8 756 aa21.11■□□□□ 0.97
NDUFS3-213ENST00000534716 EPHA7Q15375 998 aa21.11■□□□□ 0.97
NDUFS3-213ENST00000534716 C4orf19Q8IY42 314 aa21.11■□□□□ 0.97
NDUFS3-213ENST00000534716 NSUN7Q8NE18 718 aaKnown RBP21.11■□□□□ 0.97
NDUFS3-213ENST00000534716 MSLNLQ96KJ4 702 aa21.11■□□□□ 0.97
NDUFS3-213ENST00000534716 SH2D3AQ9BRG2 576 aa21.11■□□□□ 0.97
NDUFS3-213ENST00000534716 IGFLR1Q9H665 355 aa21.11■□□□□ 0.97
NDUFS3-213ENST00000534716 BRMS1Q9HCU9 246 aa21.11■□□□□ 0.97
NDUFS3-213ENST00000534716 TLR9Q9NR96 1032 aa21.11■□□□□ 0.97
NDUFS3-213ENST00000534716 WRAP73Q9P2S5 460 aaPredicted RBP21.11■□□□□ 0.97
NDUFS3-213ENST00000534716 HCSTQ9UBK5 93 aa21.11■□□□□ 0.97
NDUFS3-213ENST00000534716 A0A087WZ62 844 aa21.1■□□□□ 0.97
NDUFS3-213ENST00000534716 FSD2A1L4K1 749 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms