RNA–Protein interactions for RNA: ENST00000534669.1

GEN1-207, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 2

Gene GEN1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-207ENST00000534669 CWH43Q9H720 699 aa8.15□□□□□ -1.1
GEN1-207ENST00000534669 PSTPIP2Q9H939 334 aa8.15□□□□□ -1.1
GEN1-207ENST00000534669 JPH1Q9HDC5 661 aaPredicted RBP8.15□□□□□ -1.1
GEN1-207ENST00000534669 RNF19AQ9NV58 838 aa8.15□□□□□ -1.1
GEN1-207ENST00000534669 PCDHA6Q9UN73 950 aa8.15□□□□□ -1.1
GEN1-207ENST00000534669 PCDHA8Q9Y5H6 950 aa8.15□□□□□ -1.1
GEN1-207ENST00000534669 PCDHA2Q9Y5H9 948 aa8.15□□□□□ -1.1
GEN1-207ENST00000534669 KDM3AQ9Y4C1 1321 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 ERICH2A1L162 156 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 RRN3P2A6NIE6 340 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 TBKBP1A7MCY6 615 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 HIDE1A8MVS5 230 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 ZBTB42B2RXF5 422 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 SGSM2O43147 1006 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 PRC1O43663 620 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 FGF18O76093 207 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 DDAH1O94760 285 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 ATP4AP20648 1035 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 PBX3P40426 434 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 SARSP49591 514 aaKnown RBP8.14□□□□□ -1.11
GEN1-207ENST00000534669 KRT76Q01546 638 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 NFX1Q12986 1120 aaKnown RBP8.14□□□□□ -1.11
GEN1-207ENST00000534669 NAALADL2Q58DX5 795 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 IER5Q5VY09 327 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 MTHFD1LQ6UB35 978 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 LIAT1Q6ZQX7 453 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 LRRC55Q6ZSA7 311 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 RALYLQ86SE5 291 aaKnown RBP8.14□□□□□ -1.11
GEN1-207ENST00000534669 CCDC82Q8N4S0 544 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 COLGALT1Q8NBJ5 622 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 CTCFLQ8NI51 663 aaPredicted RBP8.14□□□□□ -1.11
GEN1-207ENST00000534669 MAP3K14Q99558 947 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 FTHL17Q9BXU8 183 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 LRRC2Q9BYS8 371 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 TLE6Q9H808 572 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 KCNH7Q9NS40 1196 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 TYW1Q9NV66 732 aaKnown RBP8.14□□□□□ -1.11
GEN1-207ENST00000534669 TMEM260Q9NX78 707 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 SLC9A2Q9UBY0 812 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 GINS2Q9Y248 185 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 RBM8AQ9Y5S9 174 aaKnown RBP8.14□□□□□ -1.11
GEN1-207ENST00000534669 DENND4AQ7Z401 1863 aa8.14□□□□□ -1.11
GEN1-207ENST00000534669 IGKV6D-21A0A0A0MT36 114 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 SMIM35A0A1B0GVV1 85 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 C9IYK1 514 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 DDX39AO00148 427 aaKnown RBP8.13□□□□□ -1.11
GEN1-207ENST00000534669 HOXA2O43364 376 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 STAG3L1P0CL83 205 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 KLRC1P26715 233 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 SMARCA1P28370 1054 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 AVPR2P30518 371 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 STAT5BP51692 787 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 SIGLEC14Q08ET2 396 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 PTPN21Q16825 1174 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 PLPP4Q5VZY2 271 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 WWC2Q6AWC2 1192 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 KANK3Q6NY19 840 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 LLGL2Q6P1M3 1020 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 TMTC3Q6ZXV5 915 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 FAM228AQ86W67 206 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 CCDC60Q8IWA6 550 aaPredicted RBP8.13□□□□□ -1.11
GEN1-207ENST00000534669 SUGP1Q8IWZ8 645 aaKnown RBP8.13□□□□□ -1.11
GEN1-207ENST00000534669 KIAA0319LQ8IZA0 1049 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 MAP4K1Q92918 833 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 CDHR1Q96JP9 859 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 ADAM2Q99965 735 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 MXRA8Q9BRK3 442 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 AGO4Q9HCK5 861 aaKnown RBP8.13□□□□□ -1.11
GEN1-207ENST00000534669 TLR9Q9NR96 1032 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 RGS18Q9NS28 235 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 SEC63Q9UGP8 760 aaKnown RBP8.13□□□□□ -1.11
GEN1-207ENST00000534669 ST3GAL5Q9UNP4 418 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 SQORQ9Y6N5 450 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 C2orf16Q68DN1 1984 aa8.13□□□□□ -1.11
GEN1-207ENST00000534669 NFASCO94856 1347 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 CNTNAP5Q8WYK1 1306 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 SPDYE3A6NKU9 549 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 H0Y858 1186 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 ATG7O95352 703 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 WEE2P0C1S8 567 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 ATF7P17544 494 aaPredicted RBP8.12□□□□□ -1.11
GEN1-207ENST00000534669 TECP42680 631 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 RPIAP49247 311 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 PRR20EP86478 221 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 PRR20CP86479 221 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 PRR20DP86480 221 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 PRR20BP86481 221 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 PRR20AP86496 221 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 DSC3Q14574 896 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 SART3Q15020 963 aaKnown RBP8.12□□□□□ -1.11
GEN1-207ENST00000534669 KIZQ2M2Z5 673 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 PLA2G2CQ5R387 149 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 SPOUT1Q5T280 376 aaKnown RBP8.12□□□□□ -1.11
GEN1-207ENST00000534669 ANKRD54Q6NXT1 300 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 ABHD15Q6UXT9 468 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 RNF19BQ6ZMZ0 732 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 ASCL5Q7RTU5 278 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 PLPPR4Q7Z2D5 763 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 HEATR3Q7Z4Q2 680 aa8.12□□□□□ -1.11
GEN1-207ENST00000534669 THNSL1Q8IYQ7 743 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms