RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 THEGQ9P2T0 379 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 PNMA3Q9UL41 463 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 ZBTB12Q9Y330 459 aaPredicted RBP18.54■□□□□ 0.56
PHRF1-206ENST00000534320 NPHP3-ACAD11A0A0J9YXS1 232 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 MED7O43513 233 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 SWSAP1Q6NVH7 229 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 FBXL16Q8N461 479 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 FAM167AQ96KS9 214 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 ODF2LQ9ULJ1 636 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 IFT172Q9UG01 1749 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 ANKRD26Q9UPS8 1709 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 E4F1Q66K89 784 aaPredicted RBP18.53■□□□□ 0.56
PHRF1-206ENST00000534320 TAB3Q8N5C8 712 aaPredicted RBP18.53■□□□□ 0.56
PHRF1-206ENST00000534320 DAGLBQ8NCG7 672 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 FAM151AQ8WW52 585 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 ACAD9Q9H845 621 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 MYMKA6NI61 221 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 VAMP7P51809 220 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 PSMD6Q15008 389 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 NACA2Q9H009 215 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 A0A087WUV0 522 aaPredicted RBP18.53■□□□□ 0.56
PHRF1-206ENST00000534320 PDXKO00764 312 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 FRMD5Q7Z6J6 570 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 EDEM3Q9BZQ6 932 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 RPF1Q9H9Y2 349 aaKnown RBP18.53■□□□□ 0.56
PHRF1-206ENST00000534320 ATP8A1Q9Y2Q0 1164 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 MRPS9P82933 396 aaKnown RBP18.53■□□□□ 0.56
PHRF1-206ENST00000534320 ST3GAL1Q11201 340 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 C3orf67Q6ZVT6 689 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 KLHL14Q9P2G3 628 aa18.53■□□□□ 0.56
PHRF1-206ENST00000534320 PNMA6AP0CW24 399 aaPredicted RBP18.52■□□□□ 0.56
PHRF1-206ENST00000534320 NTRK3Q16288 839 aa18.52■□□□□ 0.56
PHRF1-206ENST00000534320 RFX6Q8HWS3 928 aa18.52■□□□□ 0.56
PHRF1-206ENST00000534320 NSMCE1Q8WV22 266 aa18.52■□□□□ 0.56
PHRF1-206ENST00000534320 PPP1R16BQ96T49 567 aa18.52■□□□□ 0.56
PHRF1-206ENST00000534320 ITIH6Q6UXX5 1313 aa18.52■□□□□ 0.56
PHRF1-206ENST00000534320 H7C0C1 242 aa18.52■□□□□ 0.56
PHRF1-206ENST00000534320 ATP5OP48047 213 aa18.52■□□□□ 0.56
PHRF1-206ENST00000534320 RINT1Q6NUQ1 792 aa18.52■□□□□ 0.56
PHRF1-206ENST00000534320 RPS6KC1Q96S38 1066 aa18.52■□□□□ 0.56
PHRF1-206ENST00000534320 I3L4J1 428 aa18.52■□□□□ 0.55
PHRF1-206ENST00000534320 KRT1P04264 644 aa18.52■□□□□ 0.55
PHRF1-206ENST00000534320 PDXDC1Q6P996 788 aa18.52■□□□□ 0.55
PHRF1-206ENST00000534320 ZNF302Q9NR11 478 aa18.52■□□□□ 0.55
PHRF1-206ENST00000534320 DHX9Q08211 1270 aaKnown RBP18.52■□□□□ 0.55
PHRF1-206ENST00000534320 MKRN3Q13064 507 aaKnown RBP18.52■□□□□ 0.55
PHRF1-206ENST00000534320 A6NJR5 290 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 SGK1O00141 431 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 WDR46O15213 610 aaKnown RBP18.51■□□□□ 0.55
PHRF1-206ENST00000534320 CLDN3O15551 220 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 SRGNP10124 158 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 MTMR2Q13614 643 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 LPAR1Q92633 364 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 FAM213AQ9BRX8 229 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 INTS2Q9H0H0 1204 aaKnown RBP18.51■□□□□ 0.55
PHRF1-206ENST00000534320 FGGP02679 453 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 KIF22Q14807 665 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 DRAP1Q14919 205 aaPredicted RBP18.51■□□□□ 0.55
PHRF1-206ENST00000534320 SCARA5Q6ZMJ2 495 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 PDZD4Q76G19 769 aaPredicted RBP18.51■□□□□ 0.55
PHRF1-206ENST00000534320 VCPKMTQ9H867 229 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 CCDC188H7C350 402 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 HMGCS2P54868 508 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 THNSL1Q8IYQ7 743 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 PPP1R9AQ9ULJ8 1098 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 PSMD14O00487 310 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 SLC26A4O43511 780 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 NMT1P30419 496 aaKnown RBP18.51■□□□□ 0.55
PHRF1-206ENST00000534320 TOB1P50616 345 aaPredicted RBP18.51■□□□□ 0.55
PHRF1-206ENST00000534320 FXR2P51116 673 aaKnown RBP eCLIP18.51■□□□□ 0.554e-7■■■■□ 23.2
PHRF1-206ENST00000534320 DR1Q01658 176 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 ZKSCAN8Q15776 578 aaPredicted RBP18.51■□□□□ 0.55
PHRF1-206ENST00000534320 MTRQ99707 1265 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 RTFDC1Q9BY42 306 aaPredicted RBP18.51■□□□□ 0.55
PHRF1-206ENST00000534320 PCDHA10Q9Y5I2 948 aa18.51■□□□□ 0.55
PHRF1-206ENST00000534320 KIF1AQ12756 1690 aa18.5■□□□□ 0.55
PHRF1-206ENST00000534320 HDLBPQ00341 1268 aaKnown RBP18.5■□□□□ 0.55
PHRF1-206ENST00000534320 MICALL2Q8IY33 904 aa18.5■□□□□ 0.55
PHRF1-206ENST00000534320 WDR24Q96S15 920 aa18.5■□□□□ 0.55
PHRF1-206ENST00000534320 RWDD2BP57060 319 aa18.5■□□□□ 0.55
PHRF1-206ENST00000534320 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.5■□□□□ 0.55
PHRF1-206ENST00000534320 NAA30Q147X3 362 aaPredicted RBP18.5■□□□□ 0.55
PHRF1-206ENST00000534320 GLE1Q53GS7 698 aaKnown RBP18.5■□□□□ 0.55
PHRF1-206ENST00000534320 RBM43Q6ZSC3 357 aaKnown RBP18.5■□□□□ 0.55
PHRF1-206ENST00000534320 RSPH3Q86UC2 560 aa18.5■□□□□ 0.55
PHRF1-206ENST00000534320 MORC4Q8TE76 937 aa18.5■□□□□ 0.55
PHRF1-206ENST00000534320 HPSEQ9Y251 543 aa18.5■□□□□ 0.55
PHRF1-206ENST00000534320 NUB1Q9Y5A7 615 aa18.5■□□□□ 0.55
PHRF1-206ENST00000534320 TRIM49P0CI25 452 aa18.5■□□□□ 0.55
PHRF1-206ENST00000534320 TRIM49CP0CI26 452 aa18.5■□□□□ 0.55
PHRF1-206ENST00000534320 FXR1P51114 621 aaKnown RBP eCLIP18.5■□□□□ 0.55
PHRF1-206ENST00000534320 MYO1EQ12965 1108 aa18.5■□□□□ 0.55
PHRF1-206ENST00000534320 MAPK6Q16659 721 aa18.5■□□□□ 0.55
PHRF1-206ENST00000534320 TTC19Q6DKK2 380 aaPredicted RBP18.5■□□□□ 0.55
PHRF1-206ENST00000534320 EMBQ6PCB8 327 aa18.5■□□□□ 0.55
PHRF1-206ENST00000534320 HAUS6Q7Z4H7 955 aa18.5■□□□□ 0.55
PHRF1-206ENST00000534320 ATP2A3Q93084 1043 aa18.5■□□□□ 0.55
PHRF1-206ENST00000534320 MRFAP1Q9Y605 127 aa18.5■□□□□ 0.55
PHRF1-206ENST00000534320 MRPS25P82663 173 aaKnown RBP18.49■□□□□ 0.55
PHRF1-206ENST00000534320 REEP2Q9BRK0 252 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms