RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 BTG3Q14201 252 aaPredicted RBP15.79■□□□□ 0.12
SF3B2-215ENST00000534307 ODR4Q5SWX8 454 aa15.79■□□□□ 0.12
SF3B2-215ENST00000534307 DIS3L2Q8IYB7 885 aaKnown RBP15.79■□□□□ 0.12
SF3B2-215ENST00000534307 CMTR2Q8IYT2 770 aaKnown RBP15.79■□□□□ 0.12
SF3B2-215ENST00000534307 ADAM2Q99965 735 aa15.79■□□□□ 0.12
SF3B2-215ENST00000534307 BRMS1Q9HCU9 246 aa15.79■□□□□ 0.12
SF3B2-215ENST00000534307 C1orf112Q9NSG2 853 aa15.79■□□□□ 0.12
SF3B2-215ENST00000534307 RWDD3Q9Y3V2 267 aa15.79■□□□□ 0.12
SF3B2-215ENST00000534307 FNDC1Q4ZHG4 1894 aaPredicted RBP15.79■□□□□ 0.12
SF3B2-215ENST00000534307 RB1P06400 928 aa15.78■□□□□ 0.12
SF3B2-215ENST00000534307 STAG3L1P0CL83 205 aa15.78■□□□□ 0.12
SF3B2-215ENST00000534307 DARSP14868 501 aaKnown RBP15.78■□□□□ 0.12
SF3B2-215ENST00000534307 EIF4BP23588 611 aaKnown RBP15.78■□□□□ 0.12
SF3B2-215ENST00000534307 CTNNB1P35222 781 aa15.78■□□□□ 0.12
SF3B2-215ENST00000534307 QARSP47897 775 aaKnown RBP15.78■□□□□ 0.12
SF3B2-215ENST00000534307 FAM189BP81408 668 aa15.78■□□□□ 0.12
SF3B2-215ENST00000534307 MTERF2Q49AM1 385 aa15.78■□□□□ 0.12
SF3B2-215ENST00000534307 SLC24A5Q71RS6 500 aa15.78■□□□□ 0.12
SF3B2-215ENST00000534307 SH2D3AQ9BRG2 576 aa15.78■□□□□ 0.12
SF3B2-215ENST00000534307 LLPHQ9BRT6 129 aaKnown RBP15.78■□□□□ 0.12
SF3B2-215ENST00000534307 MRPL42Q9Y6G3 142 aaKnown RBP15.78■□□□□ 0.12
SF3B2-215ENST00000534307 DENND3A2RUS2 1198 aa15.77■□□□□ 0.12
SF3B2-215ENST00000534307 DDX11L8A8MPP1 907 aa15.77■□□□□ 0.12
SF3B2-215ENST00000534307 MAFO75444 373 aaPredicted RBP15.77■□□□□ 0.12
SF3B2-215ENST00000534307 P4HBP07237 508 aaKnown RBP15.77■□□□□ 0.12
SF3B2-215ENST00000534307 GATMP50440 423 aa15.77■□□□□ 0.12
SF3B2-215ENST00000534307 FOSBP53539 338 aa15.77■□□□□ 0.12
SF3B2-215ENST00000534307 EPHA7Q15375 998 aa15.77■□□□□ 0.12
SF3B2-215ENST00000534307 PTPROQ16827 1216 aa15.77■□□□□ 0.12
SF3B2-215ENST00000534307 PLA2G4FQ68DD2 849 aa15.77■□□□□ 0.12
SF3B2-215ENST00000534307 CCDC83Q8IWF9 413 aa15.77■□□□□ 0.12
SF3B2-215ENST00000534307 SLFN12Q8IYM2 578 aa15.77■□□□□ 0.12
SF3B2-215ENST00000534307 SNX27Q96L92 541 aa15.77■□□□□ 0.12
SF3B2-215ENST00000534307 PLVAPQ9BX97 442 aa15.77■□□□□ 0.12
SF3B2-215ENST00000534307 ARID2Q68CP9 1835 aa15.77■□□□□ 0.11
SF3B2-215ENST00000534307 MYO7AQ13402 2215 aa15.76■□□□□ 0.11
SF3B2-215ENST00000534307 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.76■□□□□ 0.11
SF3B2-215ENST00000534307 GRM6O15303 877 aa15.76■□□□□ 0.11
SF3B2-215ENST00000534307 NHLH1Q02575 133 aa15.76■□□□□ 0.11
SF3B2-215ENST00000534307 TRIM29Q14134 588 aa15.76■□□□□ 0.11
SF3B2-215ENST00000534307 COL19A1Q14993 1142 aa15.76■□□□□ 0.11
SF3B2-215ENST00000534307 C4orf19Q8IY42 314 aa15.76■□□□□ 0.11
SF3B2-215ENST00000534307 ZNF579Q8NAF0 562 aaKnown RBP15.76■□□□□ 0.11
SF3B2-215ENST00000534307 ZNF668Q96K58 619 aaPredicted RBP15.76■□□□□ 0.11
SF3B2-215ENST00000534307 ZSCAN31Q96LW9 406 aaPredicted RBP15.76■□□□□ 0.11
SF3B2-215ENST00000534307 MTMR9Q96QG7 549 aa15.76■□□□□ 0.11
SF3B2-215ENST00000534307 LXNQ9BS40 222 aa15.76■□□□□ 0.11
SF3B2-215ENST00000534307 C11orf84Q9BUA3 381 aaPredicted RBP15.76■□□□□ 0.11
SF3B2-215ENST00000534307 ELAC1Q9H777 363 aaKnown RBP15.76■□□□□ 0.11
SF3B2-215ENST00000534307 CYP26B1Q9NR63 512 aa15.76■□□□□ 0.11
SF3B2-215ENST00000534307 RGL1Q9NZL6 768 aa15.76■□□□□ 0.11
SF3B2-215ENST00000534307 ZDBF2Q9HCK1 2354 aa15.76■□□□□ 0.11
SF3B2-215ENST00000534307 DMDP11532 3685 aa15.75■□□□□ 0.11
SF3B2-215ENST00000534307 SPTBN4Q9H254 2564 aa15.75■□□□□ 0.11
SF3B2-215ENST00000534307 DKC1O60832 514 aaKnown RBP eCLIP15.75■□□□□ 0.11
SF3B2-215ENST00000534307 NPEPPSP55786 919 aa15.75■□□□□ 0.11
SF3B2-215ENST00000534307 CDC42EP1Q00587 391 aa15.75■□□□□ 0.11
SF3B2-215ENST00000534307 CAMK1Q14012 370 aa15.75■□□□□ 0.11
SF3B2-215ENST00000534307 PAN2Q504Q3 1202 aaKnown RBP15.75■□□□□ 0.11
SF3B2-215ENST00000534307 TIGD5Q53EQ6 642 aa15.75■□□□□ 0.11
SF3B2-215ENST00000534307 NCAPH2Q6IBW4 605 aa15.75■□□□□ 0.11
SF3B2-215ENST00000534307 FAM178BQ8IXR5 827 aa15.75■□□□□ 0.11
SF3B2-215ENST00000534307 P2RX5Q93086 422 aa15.75■□□□□ 0.11
SF3B2-215ENST00000534307 LMAN2LQ9H0V9 348 aa15.75■□□□□ 0.11
SF3B2-215ENST00000534307 DHX33Q9H6R0 707 aaKnown RBP15.75■□□□□ 0.11
SF3B2-215ENST00000534307 UBE2ZQ9H832 354 aaPredicted RBP15.75■□□□□ 0.11
SF3B2-215ENST00000534307 SH2B1Q9NRF2 756 aaPredicted RBP15.75■□□□□ 0.11
SF3B2-215ENST00000534307 RNF19AQ9NV58 838 aa15.75■□□□□ 0.11
SF3B2-215ENST00000534307 TMEM161AQ9NX61 479 aa15.75■□□□□ 0.11
SF3B2-215ENST00000534307 LRFN2Q9ULH4 789 aa15.75■□□□□ 0.11
SF3B2-215ENST00000534307 PPME1Q9Y570 386 aa15.75■□□□□ 0.11
SF3B2-215ENST00000534307 PCDHB7Q9Y5E2 793 aa15.75■□□□□ 0.11
SF3B2-215ENST00000534307 NEMFO60524 1076 aa15.74■□□□□ 0.11
SF3B2-215ENST00000534307 BAG4O95429 457 aaKnown RBP15.74■□□□□ 0.11
SF3B2-215ENST00000534307 GUCY1B3Q02153 619 aa15.74■□□□□ 0.11
SF3B2-215ENST00000534307 CALCRLQ16602 461 aa15.74■□□□□ 0.11
SF3B2-215ENST00000534307 TCEAL5Q5H9L2 206 aa15.74■□□□□ 0.11
SF3B2-215ENST00000534307 FAM102BQ5T8I3 360 aa15.74■□□□□ 0.11
SF3B2-215ENST00000534307 ZNF410Q86VK4 478 aa15.74■□□□□ 0.11
SF3B2-215ENST00000534307 GJD3Q8N144 294 aa15.74■□□□□ 0.11
SF3B2-215ENST00000534307 FBXO18Q8NFZ0 1043 aa15.74■□□□□ 0.11
SF3B2-215ENST00000534307 NLRP7Q8WX94 980 aa15.74■□□□□ 0.11
SF3B2-215ENST00000534307 DYDC2Q96IM9 177 aa15.74■□□□□ 0.11
SF3B2-215ENST00000534307 C8orf76Q96K31 380 aa15.74■□□□□ 0.11
SF3B2-215ENST00000534307 HSD17B14Q9BPX1 270 aa15.74■□□□□ 0.11
SF3B2-215ENST00000534307 RNF216Q9NWF9 866 aaPredicted RBP15.74■□□□□ 0.11
SF3B2-215ENST00000534307 SUCLA2Q9P2R7 463 aaPredicted RBP15.74■□□□□ 0.11
SF3B2-215ENST00000534307 PCDHA12Q9UN75 941 aa15.74■□□□□ 0.11
SF3B2-215ENST00000534307 PLAGL2Q9UPG8 496 aa15.74■□□□□ 0.11
SF3B2-215ENST00000534307 TECTAO75443 2155 aa15.73■□□□□ 0.11
SF3B2-215ENST00000534307 A0A087WZ62 844 aa15.73■□□□□ 0.11
SF3B2-215ENST00000534307 MARCH6O60337 910 aa15.73■□□□□ 0.11
SF3B2-215ENST00000534307 CSDE1O75534 798 aaKnown RBP15.73■□□□□ 0.11
SF3B2-215ENST00000534307 SLITRK3O94933 977 aa15.73■□□□□ 0.11
SF3B2-215ENST00000534307 LYPLA2O95372 231 aa15.73■□□□□ 0.11
SF3B2-215ENST00000534307 FGFR1P11362 822 aa15.73■□□□□ 0.11
SF3B2-215ENST00000534307 IL9P15248 144 aa15.73■□□□□ 0.11
SF3B2-215ENST00000534307 FGFR4P22455 802 aa15.73■□□□□ 0.11
SF3B2-215ENST00000534307 YWHABP31946 246 aaKnown RBP15.73■□□□□ 0.11
SF3B2-215ENST00000534307 DNM2P50570 870 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms