RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 RFX1P22670 979 aa12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 KRT76Q01546 638 aa12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 RARS2Q5T160 578 aaKnown RBP12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 APOA5Q6Q788 366 aa12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 POTEHQ6S545 545 aa12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 OTOP3Q7RTS5 596 aa12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 GPR161Q8N6U8 529 aaKnown RBP12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 BORCS6Q96GS4 357 aa12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 ZNF558Q96NG5 402 aa12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 ADAM2Q99965 735 aa12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 NCOA5Q9HCD5 579 aaKnown RBP12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 TMEM161AQ9NX61 479 aa12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 SMC3Q9UQE7 1217 aa12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 PCDHA2Q9Y5H9 948 aa12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 EPG5Q9HCE0 2579 aa12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 DMDP11532 3685 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 NCOR2Q9Y618 2525 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 C2orf71A6NGG8 1288 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 C9IYK1 514 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 HOXA2O43364 376 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 CLASP2O75122 1294 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 INSRRP14616 1297 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 DDIT3P35638 169 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 TBC1D8BQ0IIM8 1120 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 TMEM266Q2M3C6 531 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 PCNX4Q63HM2 1172 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 KCNT2Q6UVM3 1135 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 CATIPQ7Z7H3 387 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 ZNF654Q8IZM8 581 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 STAG2Q8N3U4 1231 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 DCLK2Q8N568 766 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 TMEM87AQ8NBN3 555 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 CDHR1Q96JP9 859 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 MYL10Q9BUA6 226 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 ELAC1Q9H777 363 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 SPG21Q9NZD8 308 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 IGSF9Q9P2J2 1179 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 HCSTQ9UBK5 93 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 WNT16Q9UBV4 365 aa12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 FNDC1Q4ZHG4 1894 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC4-213ENST00000533149 ZNF292O60281 2723 aa12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 SMIM35A0A1B0GVV1 85 aa12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 GSTTP1A0A1W2PQM5 241 aa12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 GOLGA8AA7E2F4 631 aa12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 GPR182O15218 404 aa12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 RPS6KA5O75582 802 aa12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 CTDNEP1O95476 244 aa12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 RXRAP19793 462 aa12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 ADD1P35611 737 aaKnown RBP12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 METAP2P50579 478 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 MICU3Q86XE3 530 aa12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 LRRC43Q8N309 656 aa12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 FANCBQ8NB91 859 aa12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 RIN2Q8WYP3 895 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 LLPHQ9BRT6 129 aaKnown RBP12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 TMEM117Q9H0C3 514 aa12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 KCNK12Q9HB15 430 aa12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 CHMP5Q9NZZ3 219 aa12.82□□□□□ -0.36
TRAPPC4-213ENST00000533149 LAMA4Q16363 1823 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 MGEA5O60502 916 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 JAK2O60674 1132 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 SP9P0CG40 484 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 ARP10275 920 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 FGFR1P11362 822 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 CDC27P30260 824 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 CA8P35219 290 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 RCAN1P53805 252 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 FAM189BP81408 668 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 GIT2Q14161 759 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 NONOQ15233 471 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 RTN1Q16799 776 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 CCDC149Q6ZUS6 474 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 HOMER1Q86YM7 354 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 ABI1Q8IZP0 508 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 C12orf76Q8N812 135 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 GPRASP2Q96D09 838 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 ZBTB10Q96DT7 871 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 AZI2Q9H6S1 392 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 FAM217BQ9NTX9 383 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 CIZ1Q9ULV3 898 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 DOCK5Q9H7D0 1870 aa12.81□□□□□ -0.36
TRAPPC4-213ENST00000533149 TPRP12270 2363 aaKnown RBP12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 PRR5-ARHGAP8B1AHC4 643 aa12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 CPLX1O14810 134 aa12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 KINO60870 393 aaKnown RBP12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 DDAH1O94760 285 aa12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 CXCL14O95715 111 aa12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 CALM1P0DP23 149 aa12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 CALM2P0DP24 149 aa12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 CALM3P0DP25 149 aa12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 KCNA2P16389 499 aa12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 GJB2P29033 226 aa12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 ATXN1P54253 815 aaKnown RBP12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 ARHGAP8P85298 464 aa12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 TROAPQ12815 778 aa12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 CABP7Q86V35 215 aa12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 C1orf210Q8IVY1 113 aa12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 SUMF1Q8NBK3 374 aa12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 NSUN7Q8NE18 718 aaKnown RBP12.8□□□□□ -0.36
TRAPPC4-213ENST00000533149 SMARCC2Q8TAQ2 1214 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms