RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 STK38Q15208 465 aa14.46□□□□□ -0.09
TRAPPC4-212ENST00000533058 KIZQ2M2Z5 673 aa14.46□□□□□ -0.09
TRAPPC4-212ENST00000533058 DTHD1Q6ZMT9 781 aa14.46□□□□□ -0.09
TRAPPC4-212ENST00000533058 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.46□□□□□ -0.09
TRAPPC4-212ENST00000533058 LRRC71Q8N4P6 559 aa14.46□□□□□ -0.09
TRAPPC4-212ENST00000533058 NEK9Q8TD19 979 aa14.46□□□□□ -0.09
TRAPPC4-212ENST00000533058 RAB34Q9BZG1 259 aa14.46□□□□□ -0.09
TRAPPC4-212ENST00000533058 ZSWIM4Q9H7M6 989 aa14.46□□□□□ -0.09
TRAPPC4-212ENST00000533058 SUGCTQ9HAC7 445 aa14.46□□□□□ -0.09
TRAPPC4-212ENST00000533058 C1orf112Q9NSG2 853 aa14.46□□□□□ -0.09
TRAPPC4-212ENST00000533058 TFIP11Q9UBB9 837 aaKnown RBP14.46□□□□□ -0.09
TRAPPC4-212ENST00000533058 SEPT9Q9UHD8 586 aaPredicted RBP14.46□□□□□ -0.09
TRAPPC4-212ENST00000533058 ST3GAL5Q9UNP4 418 aa14.46□□□□□ -0.09
TRAPPC4-212ENST00000533058 AKT3Q9Y243 479 aa14.46□□□□□ -0.09
TRAPPC4-212ENST00000533058 MTCH2Q9Y6C9 303 aa14.46□□□□□ -0.09
TRAPPC4-212ENST00000533058 RBAK-RBAKDNI3L0D1 243 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 DGKIO75912 1065 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 SLITRK3O94933 977 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 STAG3L1P0CL83 205 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 GPC3P51654 580 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 TTC3P53804 2025 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 ATP2C1P98194 919 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 NFX1Q12986 1120 aaKnown RBP14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 GRB10Q13322 594 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 MTERF2Q49AM1 385 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 SLC24A5Q71RS6 500 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 OTUD6AQ7L8S5 288 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 NPAS4Q8IUM7 802 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 C4orf32Q8N8J7 132 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 USP28Q96RU2 1077 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 OSMRQ99650 979 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 LXNQ9BS40 222 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 CERS4Q9HA82 394 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 CYP26B1Q9NR63 512 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 RGS18Q9NS28 235 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 GINS2Q9Y248 185 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 ZDHHC9Q9Y397 364 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 RWDD3Q9Y3V2 267 aa14.45□□□□□ -0.1
TRAPPC4-212ENST00000533058 VWA3AA6NCI4 1184 aa14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 POTEMA6NI47 508 aa14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 RFXAPO00287 272 aa14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 GAS2O43903 313 aaKnown RBP14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 DARSP14868 501 aaKnown RBP14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 MARCKSP29966 332 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 PRPHP41219 470 aa14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 SARSP49591 514 aaKnown RBP14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 FAM189BP81408 668 aa14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 DNM1Q05193 864 aaKnown RBP14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 SPRED2Q7Z698 418 aa14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 ZNF410Q86VK4 478 aa14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 FAM228AQ86W67 206 aa14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 FIBCD1Q8N539 461 aa14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 ERMNQ8TAM6 284 aa14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 CLP1Q92989 425 aaKnown RBP14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 DHX33Q9H6R0 707 aaKnown RBP14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 ELAC1Q9H777 363 aaKnown RBP14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 RGL1Q9NZL6 768 aa14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 WRAP73Q9P2S5 460 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 CFAP45Q9UL16 551 aa14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 CIZ1Q9ULV3 898 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC4-212ENST00000533058 ADGRA3Q8IWK6 1321 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 WDR81Q562E7 1941 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 TMEM150BA6NC51 233 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 C9IYK1 514 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 C5orf67F2Z3F1 127 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 RB1P06400 928 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 LINC00271P0C7V0 271 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 XRCC6P12956 609 aaKnown RBP eCLIP14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 YWHABP31946 246 aaKnown RBP14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 DDIT3P35638 169 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 RFC5P40937 340 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 DSC3Q14574 896 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 EPC2Q52LR7 807 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 ARL6IP4Q66PJ3 421 aaKnown RBP14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 ATL3Q6DD88 541 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 TMEM192Q8IY95 271 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 CMTR2Q8IYT2 770 aaKnown RBP14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 SLC7A3Q8WY07 619 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 DYDC2Q96IM9 177 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 CEP170P1Q96L14 293 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 ADAM2Q99965 735 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 EIF2AK1Q9BQI3 630 aaKnown RBP14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 C17orf80Q9BSJ5 609 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 INO80BQ9C086 356 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 ANKEF1Q9NU02 776 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 CHMP5Q9NZZ3 219 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 LRWD1Q9UFC0 647 aa14.43□□□□□ -0.1
TRAPPC4-212ENST00000533058 EVPLQ92817 2033 aa14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 TRANK1O15050 2925 aa14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 DENND3A2RUS2 1198 aa14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 H3BNC9 293 aa14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 MGEA5O60502 916 aa14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 FXR2P51116 673 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 NPEPPSP55786 919 aa14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 KRT85P78386 507 aa14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 CYP4A11Q02928 519 aa14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 DRP2Q13474 957 aa14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 ZRSR1Q15695 479 aaKnown RBP14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 PLA2G4FQ68DD2 849 aa14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 TPH2Q8IWU9 490 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms