RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 LMBR1Q8WVP7 490 aa11.49□□□□□ -0.57
CHMP4A-206ENST00000533011 SLC5A5Q92911 643 aa11.49□□□□□ -0.57
CHMP4A-206ENST00000533011 WNT8BQ93098 351 aa11.49□□□□□ -0.57
CHMP4A-206ENST00000533011 ZNF689Q96CS4 500 aaPredicted RBP11.49□□□□□ -0.57
CHMP4A-206ENST00000533011 RIT2Q99578 217 aa11.49□□□□□ -0.57
CHMP4A-206ENST00000533011 MFSD1Q9H3U5 465 aa11.49□□□□□ -0.57
CHMP4A-206ENST00000533011 TLE6Q9H808 572 aa11.49□□□□□ -0.57
CHMP4A-206ENST00000533011 PCDHGC5Q9Y5F6 944 aa11.49□□□□□ -0.57
CHMP4A-206ENST00000533011 GTF3C3Q9Y5Q9 886 aa11.49□□□□□ -0.57
CHMP4A-206ENST00000533011 VPS13AQ96RL7 3174 aa11.49□□□□□ -0.57
CHMP4A-206ENST00000533011 RRN3P2A6NIE6 340 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 BACH1O14867 736 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 TDP2O95551 362 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 INSRRP14616 1297 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 NRIP1P48552 1158 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 HMGN5P82970 282 aaKnown RBP11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 UBE3AQ05086 875 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 PLCB4Q15147 1175 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 GRIK4Q16099 956 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 LETM2Q2VYF4 491 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 LRCH2Q5VUJ6 765 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 PPP4R3AQ6IN85 833 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 SWSAP1Q6NVH7 229 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 TMEM184AQ6ZMB5 413 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 FAM43BQ6ZT52 329 aaPredicted RBP11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 PIK3AP1Q6ZUJ8 805 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 NEK8Q86SG6 692 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 SPPL3Q8TCT6 385 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 ATP8B4Q8TF62 1192 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 BORCS6Q96GS4 357 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 MBOAT7Q96N66 472 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 TBC1D32Q96NH3 1257 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 NAP1L4Q99733 375 aaKnown RBP11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 ZNF302Q9NR11 478 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 TUBE1Q9UJT0 475 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 PCDHA10Q9Y5I2 948 aa11.48□□□□□ -0.57
CHMP4A-206ENST00000533011 WDR64B1ANS9 1081 aa11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 GAS7O60861 476 aa11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 PSMD10O75832 226 aa11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 PSAPP07602 524 aa11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 GCFC2P16383 781 aaKnown RBP11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 HOXB8P17481 243 aaPredicted RBP11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 SFNP31947 248 aa11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 NR5A1Q13285 461 aa11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 FAM26DQ5JW98 314 aa11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 TAF2Q6P1X5 1199 aa11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 PDXDC2PQ6P474 469 aa11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 CCDC60Q8IWA6 550 aaPredicted RBP11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 RTP3Q9BQQ7 232 aa11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 TEKT3Q9BXF9 490 aa11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 RC3H2Q9HBD1 1191 aaKnown RBP11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 DDX25Q9UHL0 483 aaKnown RBP11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 BARX2Q9UMQ3 279 aaPredicted RBP11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 SAMM50Q9Y512 469 aa11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 BAHCC1Q9P281 2608 aa11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 KAT6AQ92794 2004 aa11.47□□□□□ -0.57
CHMP4A-206ENST00000533011 MBLAC1A4D2B0 266 aaPredicted RBP11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 BTBD18B2RXH4 712 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 HBP1O60381 514 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 CCNT1O60563 726 aaKnown RBP11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 DGKIO75912 1065 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 GLP2RO95838 553 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 RPLP2P05387 115 aaKnown RBP11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 ITGB1P05556 798 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 MCM2P49736 904 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 FOSBP53539 338 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 IGBP1P78318 339 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 SAFBQ15424 915 aaKnown RBP eCLIP11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 EARS2Q5JPH6 523 aaKnown RBP11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 MARCH8Q5T0T0 291 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 RSPH3Q86UC2 560 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 DIS3L2Q8IYB7 885 aaKnown RBP11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 KIAA2013Q8IYS2 634 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 CMTR2Q8IYT2 770 aaKnown RBP11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 GPR161Q8N6U8 529 aaKnown RBP11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 FAM184AQ8NB25 1140 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 ETNPPLQ8TBG4 499 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 POF1BQ8WVV4 589 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 TNFRSF25Q93038 417 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 C8orf76Q96K31 380 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 NECTIN4Q96NY8 510 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 BACH2Q9BYV9 841 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 DISC1Q9NRI5 854 aa11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 MAFBQ9Y5Q3 323 aaPredicted RBP11.46□□□□□ -0.57
CHMP4A-206ENST00000533011 CHD6Q8TD26 2715 aa11.46□□□□□ -0.58
CHMP4A-206ENST00000533011 COL1A2P08123 1366 aa11.45□□□□□ -0.58
CHMP4A-206ENST00000533011 ZFHX4Q86UP3 3567 aa11.45□□□□□ -0.58
CHMP4A-206ENST00000533011 FAM205CA6NFA0 338 aa11.45□□□□□ -0.58
CHMP4A-206ENST00000533011 ENPP3O14638 875 aa11.45□□□□□ -0.58
CHMP4A-206ENST00000533011 TBX3O15119 743 aa11.45□□□□□ -0.58
CHMP4A-206ENST00000533011 CHMP2AO43633 222 aa11.45□□□□□ -0.58
CHMP4A-206ENST00000533011 SLC37A4O43826 429 aa11.45□□□□□ -0.58
CHMP4A-206ENST00000533011 CTSHP09668 335 aa11.45□□□□□ -0.58
CHMP4A-206ENST00000533011 ATP4AP20648 1035 aa11.45□□□□□ -0.58
CHMP4A-206ENST00000533011 JAK3P52333 1124 aa11.45□□□□□ -0.58
CHMP4A-206ENST00000533011 ANGPT1Q15389 498 aa11.45□□□□□ -0.58
CHMP4A-206ENST00000533011 ST3GAL2Q16842 350 aa11.45□□□□□ -0.58
CHMP4A-206ENST00000533011 ZNF484Q5JVG2 852 aa11.45□□□□□ -0.58
CHMP4A-206ENST00000533011 KIAA0319Q5VV43 1072 aa11.45□□□□□ -0.58
CHMP4A-206ENST00000533011 ZC3H14Q6PJT7 736 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms