RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 SALL4Q9UJQ4 1053 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 TRAF3IP3Q9Y228 551 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 MYH13Q9UKX3 1938 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 THAP12O43422 761 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 NEBLO76041 1014 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 PTENP60484 403 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 GPC5P78333 572 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 MKRN3Q13064 507 aaKnown RBP10.15□□□□□ -0.78
BDNF-216ENST00000532997 GSTA5Q7RTV2 222 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 JAMLQ86YT9 394 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 TATDN2Q93075 761 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 DNAJC19Q96DA6 116 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 ROPN1BQ9BZX4 212 aaPredicted RBP10.15□□□□□ -0.78
BDNF-216ENST00000532997 WNT8AQ9H1J5 351 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 ROPN1Q9HAT0 212 aaPredicted RBP10.15□□□□□ -0.78
BDNF-216ENST00000532997 TXLNGQ9NUQ3 528 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 CCNL1Q9UK58 526 aaPredicted RBP10.15□□□□□ -0.78
BDNF-216ENST00000532997 EXOC7Q9UPT5 735 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 CD2APQ9Y5K6 639 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 ANKRD36CQ5JPF3 1778 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 ATP8B3O60423 1300 aa10.15□□□□□ -0.79
BDNF-216ENST00000532997 ASAP2O43150 1006 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 CHMP2AO43633 222 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 GAS7O60861 476 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 DNAJC8O75937 253 aaPredicted RBP10.14□□□□□ -0.79
BDNF-216ENST00000532997 RPSAP08865 295 aaKnown RBP10.14□□□□□ -0.79
BDNF-216ENST00000532997 ZNF131P52739 623 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 STRN3Q13033 797 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 CCDC6Q16204 474 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 TSNAXIP1Q2TAA8 658 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 ODR4Q5SWX8 454 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 CELF4Q9BZC1 486 aaKnown RBP10.14□□□□□ -0.79
BDNF-216ENST00000532997 LARSQ9P2J5 1176 aaKnown RBP10.14□□□□□ -0.79
BDNF-216ENST00000532997 DDX60Q8IY21 1712 aaKnown RBP10.14□□□□□ -0.79
BDNF-216ENST00000532997 NPHP3-ACAD11A0A0J9YXS1 232 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 EYA4O95677 639 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 ATF2P15336 505 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 RPA1P27694 616 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 SLCO1A2P46721 670 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 GTF2IP78347 998 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 IL9RQ01113 521 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 CAV1Q03135 178 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 ALCAMQ13740 583 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 PPP2R5AQ15172 486 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 TRMT10CQ7L0Y3 403 aaKnown RBP10.14□□□□□ -0.79
BDNF-216ENST00000532997 TRPM8Q7Z2W7 1104 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 FUKQ8N0W3 1084 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 ANKRD35Q8N283 1001 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 ZKSCAN4Q969J2 545 aaPredicted RBP10.14□□□□□ -0.79
BDNF-216ENST00000532997 HOOK2Q96ED9 719 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 NACC1Q96RE7 527 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 GOLPH3Q9H4A6 298 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 JMJD4Q9H9V9 463 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 STK38LQ9Y2H1 464 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 UBE4BO95155 1302 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 USP17L10C9JJH3 530 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 EIF3DO15371 548 aaKnown RBP eCLIP10.14□□□□□ -0.79
BDNF-216ENST00000532997 TLR2O60603 784 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 RWDD2BP57060 319 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 SF3A3Q12874 501 aaKnown RBP eCLIP10.14□□□□□ -0.79
BDNF-216ENST00000532997 USH1GQ495M9 461 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 FYB2Q5VWT5 728 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 SYT2Q8N9I0 419 aaPredicted RBP10.14□□□□□ -0.79
BDNF-216ENST00000532997 PGM2Q96G03 612 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 REEP2Q9BRK0 252 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 TRIM6Q9C030 488 aaPredicted RBP10.14□□□□□ -0.79
BDNF-216ENST00000532997 INTS2Q9H0H0 1204 aaKnown RBP10.14□□□□□ -0.79
BDNF-216ENST00000532997 SUFUQ9UMX1 484 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 DOCK2Q92608 1830 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 LRRN2O75325 713 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 ATP5HO75947 161 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 MAPK7Q13164 816 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 PLS1Q14651 629 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 CRYMQ14894 314 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 SGO2Q562F6 1265 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 NUGGCQ68CJ6 796 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 TEKT1Q969V4 418 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 ATP6V0A4Q9HBG4 840 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 DONSONQ9NYP3 566 aa10.14□□□□□ -0.79
BDNF-216ENST00000532997 CNOT7Q9UIV1 285 aaKnown RBP10.14□□□□□ -0.79
BDNF-216ENST00000532997 PLCH1Q4KWH8 1693 aa10.13□□□□□ -0.79
BDNF-216ENST00000532997 USP17L15C9J2P7 530 aa10.13□□□□□ -0.79
BDNF-216ENST00000532997 USP17L13C9JLJ4 530 aa10.13□□□□□ -0.79
BDNF-216ENST00000532997 USP17L11C9JVI0 530 aa10.13□□□□□ -0.79
BDNF-216ENST00000532997 USP17L18D6R9N7 530 aa10.13□□□□□ -0.79
BDNF-216ENST00000532997 USP17L22D6RA61 530 aa10.13□□□□□ -0.79
BDNF-216ENST00000532997 USP17L17D6RBQ6 530 aa10.13□□□□□ -0.79
BDNF-216ENST00000532997 USP17L19D6RCP7 530 aa10.13□□□□□ -0.79
BDNF-216ENST00000532997 USP17L20D6RJB6 530 aa10.13□□□□□ -0.79
BDNF-216ENST00000532997 BACH1O14867 736 aa10.13□□□□□ -0.79
BDNF-216ENST00000532997 AKR1B1P15121 316 aa10.13□□□□□ -0.79
BDNF-216ENST00000532997 USP17L24Q0WX57 530 aa10.13□□□□□ -0.79
BDNF-216ENST00000532997 ZNF211Q13398 564 aaPredicted RBP10.13□□□□□ -0.79
BDNF-216ENST00000532997 ZKSCAN8Q15776 578 aaPredicted RBP10.13□□□□□ -0.79
BDNF-216ENST00000532997 ZCWPW2Q504Y3 356 aa10.13□□□□□ -0.79
BDNF-216ENST00000532997 LRCH2Q5VUJ6 765 aa10.13□□□□□ -0.79
BDNF-216ENST00000532997 CCDC137Q6PK04 289 aaKnown RBP10.13□□□□□ -0.79
BDNF-216ENST00000532997 USP17L6PQ6QN14 398 aa10.13□□□□□ -0.79
BDNF-216ENST00000532997 KCNK18Q7Z418 384 aa10.13□□□□□ -0.79
BDNF-216ENST00000532997 NT5DC3Q86UY8 548 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms