RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 USP17L11C9JVI0 530 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 USP17L18D6R9N7 530 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 USP17L22D6RA61 530 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 USP17L17D6RBQ6 530 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 USP17L19D6RCP7 530 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 USP17L20D6RJB6 530 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 PSMD14O00487 310 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 OPLAHO14841 1288 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 EIF3DO15371 548 aaKnown RBP eCLIP6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 SLC16A3O15427 465 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 KRT86O43790 486 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 URI1O94763 535 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 LCA5LO95447 670 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 EYA4O95677 639 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 CYP11B2P19099 503 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 CAP2P40123 477 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 GOLGA8FQ08AF8 430 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 GOLGA8DPQ0D2H9 430 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 USP17L24Q0WX57 530 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 PPP2R5CQ13362 524 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 ELF2Q15723 593 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 USP17L6PQ6QN14 398 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 RSRC2Q7L4I2 434 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 KCNK18Q7Z418 384 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 FMNL3Q8IVF7 1028 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 NIM1KQ8IY84 436 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 LARGE2Q8N3Y3 721 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 RHBDD1Q8TEB9 315 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 TMEM174Q8WUU8 243 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 RUBCNQ92622 972 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 GOLGA1Q92805 767 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 WDR24Q96S15 920 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 NAPGQ99747 312 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 WDR11Q9BZH6 1224 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 NDST4Q9H3R1 872 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 MRPL44Q9H9J2 332 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 ETNK1Q9HBU6 452 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 PANK4Q9NVE7 773 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 FAM53CQ9NYF3 392 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 OGFRQ9NZT2 677 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 DDX41Q9UJV9 622 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 FBXL5Q9UKA1 691 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 VAV3Q9UKW4 847 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 PRR12Q9ULL5 1215 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 DNM3Q9UQ16 869 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 COL4A3BPQ9Y5P4 624 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 PARP14Q460N5 1801 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 FRMPD4Q14CM0 1322 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 RPTORQ8N122 1335 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 MYH11P35749 1972 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 IGLV3-22A0A075B6J6 115 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 A0A1W2PRG0 241 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 GTPBP10A4D1E9 387 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 CCDC151A5D8V7 595 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 B4DLN1 442 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 GCOM1H8Y6P7 765 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 RBAK-RBAKDNI3L0D1 243 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 PDXKO00764 312 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 WDR46O15213 610 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 FANCGO15287 622 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 C21orf2O43822 256 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 PSMD10O75832 226 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 POLR2MP0CAP2 368 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 EPXP11678 715 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 IDEP14735 1019 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 ARHGAP25P42331 645 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 PLA2G4AP47712 749 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 HSD17B4P51659 736 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 VAV2P52735 878 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 CACNB3P54284 484 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 ZNF280AP59817 542 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 AMPD2Q01433 879 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 ITIH3Q06033 890 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 ALCAMQ13740 583 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 MYBPC2Q14324 1141 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 TLR1Q15399 786 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 WDR59Q6PJI9 974 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 B3GNT9Q6UX72 402 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 STXBP4Q6ZWJ1 553 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 EPM2AIP1Q7L775 607 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 SRGAP1Q7Z6B7 1085 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 FRMD5Q7Z6J6 570 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 GPBP1Q86WP2 473 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 TRIM59Q8IWR1 403 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 SMAP1Q8IYB5 467 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 SLC5A5Q92911 643 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 BTBD6Q96KE9 485 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 PLIN2Q99541 437 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 RIT2Q99578 217 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 DESI2Q9BSY9 194 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 MKNK1Q9BUB5 465 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 TIPINQ9BVW5 301 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 KCTD10Q9H3F6 313 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 METTL14Q9HCE5 456 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 SLC39A2Q9NP94 309 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 LUC7LQ9NQ29 371 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 CEP72Q9P209 647 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 PGAP2Q9UHJ9 254 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 ODF2LQ9ULJ1 636 aa6.3□□□□□ -1.4
ATPAF1-210ENST00000532925 MAPK8IP1Q9UQF2 711 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms