RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 PEX11GQ96HA9 241 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 CCDC120Q96HB5 630 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 MAML3Q96JK9 1138 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 MPHOSPH6Q99547 160 aaKnown RBP3.86□□□□□ -1.79
CD44-234ENST00000531873 FOXB1Q99853 325 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 KCTD10Q9H3F6 313 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 DDX21Q9NR30 783 aaKnown RBP eCLIP3.86□□□□□ -1.79
CD44-234ENST00000531873 DTLQ9NZJ0 730 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 NUDT5Q9UKK9 219 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 WASF3Q9UPY6 502 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 DNM3Q9UQ16 869 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 CTNND2Q9UQB3 1225 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 PRAMEF22A3QJZ6 481 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.85□□□□□ -1.79
CD44-234ENST00000531873 F8W031 263 aaPredicted RBP3.85□□□□□ -1.79
CD44-234ENST00000531873 AP1G1O43747 822 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 LRG1P02750 347 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 KRT1P04264 644 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 POU2F2P09086 479 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 MYBP10242 640 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 ARL4AP40617 200 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 SLC6A3Q01959 620 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 HDAC1Q13547 482 aaPredicted RBP3.85□□□□□ -1.79
CD44-234ENST00000531873 SNX17Q15036 470 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 MLANAQ16655 118 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 PLEKHN1Q494U1 663 aaPredicted RBP3.85□□□□□ -1.79
CD44-234ENST00000531873 ARHGAP29Q52LW3 1261 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 TTC38Q5R3I4 469 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 ATAT1Q5SQI0 421 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 PRAMEF18Q5VWM3 479 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 PRAMEF9Q5VWM5 478 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 MBNL2Q5VZF2 373 aaKnown RBP3.85□□□□□ -1.79
CD44-234ENST00000531873 PPP4R4Q6NUP7 873 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 CHST15Q7LFX5 561 aaPredicted RBP3.85□□□□□ -1.79
CD44-234ENST00000531873 FAM126BQ8IXS8 530 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 SMC5Q8IY18 1101 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 PJA1Q8NG27 643 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 DIS3LQ8TF46 1054 aaKnown RBP3.85□□□□□ -1.79
CD44-234ENST00000531873 AUTS2Q8WXX7 1259 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 MYLIPQ8WY64 445 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 HPS3Q969F9 1004 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 FERMT2Q96AC1 680 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 COA7Q96BR5 231 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 TUBGCP5Q96RT8 1024 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 ACO2Q99798 780 aaKnown RBP3.85□□□□□ -1.79
CD44-234ENST00000531873 AMNQ9BXJ7 453 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 RNF32Q9H0A6 362 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 CSRNP2Q9H175 543 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 WNT8AQ9H1J5 351 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 BCAS3Q9H6U6 928 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 UCKL1Q9NWZ5 548 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 HSPBP1Q9NZL4 362 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 RBPJLQ9UBG7 517 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 DPP7Q9UHL4 492 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 SAP30BPQ9UHR5 308 aaKnown RBP3.85□□□□□ -1.79
CD44-234ENST00000531873 NUMBLQ9Y6R0 609 aa3.85□□□□□ -1.79
CD44-234ENST00000531873 FRMPD2Q68DX3 1309 aaPredicted RBP3.85□□□□□ -1.79
CD44-234ENST00000531873 NUDT19A8MXV4 375 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 NFIBO00712 420 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 APAF1O14727 1248 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 OFD1O75665 1012 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 EIF3JO75822 258 aaKnown RBP3.84□□□□□ -1.79
CD44-234ENST00000531873 APOL3O95236 402 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 LDHAP00338 332 aaKnown RBP3.84□□□□□ -1.79
CD44-234ENST00000531873 PTGS1P23219 599 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 NEK3P51956 506 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 LGALS4P56470 323 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 PRR5P85299 388 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 KIF23Q02241 960 aaPredicted RBP3.84□□□□□ -1.79
CD44-234ENST00000531873 IL31Q6EBC2 164 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 SLFN12LQ6IEE8 588 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 TEPPQ6URK8 271 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 LRSAM1Q6UWE0 723 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 LIPIQ6XZB0 460 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 OVCH2Q7RTZ1 564 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 THEMISQ8N1K5 641 aaPredicted RBP3.84□□□□□ -1.79
CD44-234ENST00000531873 MIER2Q8N344 545 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 PRR18Q8N4B5 295 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 ZBTB34Q8NCN2 500 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 RAX2Q96IS3 184 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 PITHD1Q9GZP4 211 aaPredicted RBP3.84□□□□□ -1.79
CD44-234ENST00000531873 IFT122Q9HBG6 1241 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 SLC39A2Q9NP94 309 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 C1orf112Q9NSG2 853 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 PRSS50Q9UI38 385 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 RCAN3Q9UKA8 241 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 DENND2AQ9ULE3 1009 aa3.84□□□□□ -1.79
CD44-234ENST00000531873 YBX2Q9Y2T7 364 aaKnown RBP3.84□□□□□ -1.79
CD44-234ENST00000531873 ST20-MTHFSA0A0A6YYL1 179 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 ZNF839A8K0R7 811 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 TPP1O14773 563 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 ZBTB7AO95365 584 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 INHBBP09529 407 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 MTHFD2P13995 350 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 PHKG2P15735 406 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 RHCEP18577 417 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 FBLN1P23142 703 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 EDNRBP24530 442 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 STAT5AP42229 794 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 SLC5A3P53794 718 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms