RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 ZNF577Q9BSK1 485 aa18.22■□□□□ 0.51
COL16A1-216ENST00000529928 POMKQ9H5K3 350 aa18.22■□□□□ 0.51
COL16A1-216ENST00000529928 AKT3Q9Y243 479 aa18.22■□□□□ 0.51
COL16A1-216ENST00000529928 HCFC2Q9Y5Z7 792 aa18.22■□□□□ 0.51
COL16A1-216ENST00000529928 CACNA1HO95180 2353 aa18.22■□□□□ 0.51
COL16A1-216ENST00000529928 C2CD4DB7Z1M9 353 aa18.21■□□□□ 0.51
COL16A1-216ENST00000529928 PSAPP07602 524 aa18.21■□□□□ 0.51
COL16A1-216ENST00000529928 CYP3A4P08684 503 aa18.21■□□□□ 0.51
COL16A1-216ENST00000529928 EIF4BP23588 611 aaKnown RBP18.21■□□□□ 0.51
COL16A1-216ENST00000529928 TMOD1P28289 359 aa18.21■□□□□ 0.51
COL16A1-216ENST00000529928 CLCN3P51790 818 aa18.21■□□□□ 0.51
COL16A1-216ENST00000529928 BMS1Q14692 1282 aaKnown RBP18.21■□□□□ 0.51
COL16A1-216ENST00000529928 TRMT1LQ7Z2T5 733 aaKnown RBP18.21■□□□□ 0.51
COL16A1-216ENST00000529928 CRYGNQ8WXF5 182 aa18.21■□□□□ 0.51
COL16A1-216ENST00000529928 FAM167AQ96KS9 214 aa18.21■□□□□ 0.51
COL16A1-216ENST00000529928 PCDHA10Q9Y5I2 948 aa18.21■□□□□ 0.51
COL16A1-216ENST00000529928 C2orf71A6NGG8 1288 aa18.2■□□□□ 0.5
COL16A1-216ENST00000529928 ZBTB43O43298 467 aa18.2■□□□□ 0.5
COL16A1-216ENST00000529928 BRD1O95696 1058 aa18.2■□□□□ 0.5
COL16A1-216ENST00000529928 EOMESO95936 686 aa18.2■□□□□ 0.5
COL16A1-216ENST00000529928 MTHFRP42898 656 aa18.2■□□□□ 0.5
COL16A1-216ENST00000529928 JAKMIP3Q5VZ66 844 aa18.2■□□□□ 0.5
COL16A1-216ENST00000529928 MCTP2Q6DN12 878 aa18.2■□□□□ 0.5
COL16A1-216ENST00000529928 EFCAB12Q6NXP0 572 aa18.2■□□□□ 0.5
COL16A1-216ENST00000529928 SLC39A11Q8N1S5 342 aa18.2■□□□□ 0.5
COL16A1-216ENST00000529928 RNF169Q8NCN4 708 aa18.2■□□□□ 0.5
COL16A1-216ENST00000529928 ESYT1Q9BSJ8 1104 aa18.2■□□□□ 0.5
COL16A1-216ENST00000529928 MRPL9Q9BYD2 267 aaKnown RBP18.2■□□□□ 0.5
COL16A1-216ENST00000529928 ADAMTS10Q9H324 1103 aa18.2■□□□□ 0.5
COL16A1-216ENST00000529928 CDH22Q9UJ99 828 aa18.2■□□□□ 0.5
COL16A1-216ENST00000529928 A0A0U1RQF3 1178 aa18.19■□□□□ 0.5
COL16A1-216ENST00000529928 ALDH7A1P49419 539 aaKnown RBP18.19■□□□□ 0.5
COL16A1-216ENST00000529928 FOXK2Q01167 660 aa18.19■□□□□ 0.5
COL16A1-216ENST00000529928 CLLU1OSQ5K130 101 aa18.19■□□□□ 0.5
COL16A1-216ENST00000529928 RNF20Q5VTR2 975 aa18.19■□□□□ 0.5
COL16A1-216ENST00000529928 LINC01465Q8N7H1 131 aa18.19■□□□□ 0.5
COL16A1-216ENST00000529928 ANO2Q9NQ90 1003 aa18.19■□□□□ 0.5
COL16A1-216ENST00000529928 GABBR1Q9UBS5 961 aa18.19■□□□□ 0.5
COL16A1-216ENST00000529928 SAMM50Q9Y512 469 aa18.19■□□□□ 0.5
COL16A1-216ENST00000529928 MYH9P35579 1960 aaKnown RBP18.19■□□□□ 0.5
COL16A1-216ENST00000529928 PLXNA3P51805 1871 aa18.18■□□□□ 0.5
COL16A1-216ENST00000529928 CLASP2O75122 1294 aaKnown RBP18.18■□□□□ 0.5
COL16A1-216ENST00000529928 CA8P35219 290 aa18.18■□□□□ 0.5
COL16A1-216ENST00000529928 LRRC71Q8N4P6 559 aa18.18■□□□□ 0.5
COL16A1-216ENST00000529928 TMEM105Q8N8V8 129 aa18.18■□□□□ 0.5
COL16A1-216ENST00000529928 TDRD5Q8NAT2 981 aaKnown RBP18.18■□□□□ 0.5
COL16A1-216ENST00000529928 RSPH1Q8WYR4 309 aa18.18■□□□□ 0.5
COL16A1-216ENST00000529928 TMEM169Q96HH4 297 aa18.18■□□□□ 0.5
COL16A1-216ENST00000529928 DZANK1Q9NVP4 752 aa18.18■□□□□ 0.5
COL16A1-216ENST00000529928 DACT1Q9NYF0 836 aa18.18■□□□□ 0.5
COL16A1-216ENST00000529928 BRPF3Q9ULD4 1205 aa18.18■□□□□ 0.5
COL16A1-216ENST00000529928 CFAP54Q96N23 3096 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 ESYT2A0FGR8 921 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 CARNS1A5YM72 827 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 GOLGA8AA7E2F4 631 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 GOLGA8BA8MQT2 603 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 CXCL14O95715 111 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 DARSP14868 501 aaKnown RBP18.17■□□□□ 0.5
COL16A1-216ENST00000529928 NBL1P41271 181 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 METAP2P50579 478 aaKnown RBP eCLIP18.17■□□□□ 0.5
COL16A1-216ENST00000529928 GPC3P51654 580 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 RCAN1P53805 252 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 KIAA1841Q6NSI8 718 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 ZNF598Q86UK7 904 aaKnown RBP18.17■□□□□ 0.5
COL16A1-216ENST00000529928 ZDHHC14Q8IZN3 488 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 PLCD3Q8N3E9 789 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 TMEM87AQ8NBN3 555 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 HELQQ8TDG4 1101 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 SCLT1Q96NL6 688 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 NRBP2Q9NSY0 501 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 USTQ9Y2C2 406 aa18.17■□□□□ 0.5
COL16A1-216ENST00000529928 ZFHX2Q9C0A1 2572 aaPredicted RBP18.17■□□□□ 0.5
COL16A1-216ENST00000529928 WDR64B1ANS9 1081 aa18.16■□□□□ 0.5
COL16A1-216ENST00000529928 OATP04181 439 aa18.16■□□□□ 0.5
COL16A1-216ENST00000529928 BCAR1P56945 870 aa18.16■□□□□ 0.5
COL16A1-216ENST00000529928 EXOSC10Q01780 885 aaKnown RBP18.16■□□□□ 0.5
COL16A1-216ENST00000529928 GIT2Q14161 759 aa18.16■□□□□ 0.5
COL16A1-216ENST00000529928 PFKFB3Q16875 520 aaPredicted RBP18.16■□□□□ 0.5
COL16A1-216ENST00000529928 PRR16Q569H4 304 aa18.16■□□□□ 0.5
COL16A1-216ENST00000529928 ATAT1Q5SQI0 421 aa18.16■□□□□ 0.5
COL16A1-216ENST00000529928 RARS2Q5T160 578 aaKnown RBP18.16■□□□□ 0.5
COL16A1-216ENST00000529928 ASTLQ6HA08 431 aaPredicted RBP18.16■□□□□ 0.5
COL16A1-216ENST00000529928 DHX32Q7L7V1 743 aaKnown RBP18.16■□□□□ 0.5
COL16A1-216ENST00000529928 ASCL5Q7RTU5 278 aa18.16■□□□□ 0.5
COL16A1-216ENST00000529928 VPS52Q8N1B4 723 aa18.16■□□□□ 0.5
COL16A1-216ENST00000529928 REXO1Q8N1G1 1221 aaKnown RBP18.16■□□□□ 0.5
COL16A1-216ENST00000529928 CCDC12Q8WUD4 166 aaPredicted RBP18.16■□□□□ 0.5
COL16A1-216ENST00000529928 ZMYND12Q9H0C1 365 aa18.16■□□□□ 0.5
COL16A1-216ENST00000529928 MFSD1Q9H3U5 465 aa18.16■□□□□ 0.5
COL16A1-216ENST00000529928 C6orf50Q9HD87 102 aa18.16■□□□□ 0.5
COL16A1-216ENST00000529928 DBR1Q9UK59 544 aaKnown RBP18.16■□□□□ 0.5
COL16A1-216ENST00000529928 IRAK3Q9Y616 596 aa18.16■□□□□ 0.5
COL16A1-216ENST00000529928 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.15■□□□□ 0.5
COL16A1-216ENST00000529928 PRR23AA6NEV1 266 aa18.15■□□□□ 0.5
COL16A1-216ENST00000529928 NT5C1B-RDH14C9J2C7 533 aa18.15■□□□□ 0.5
COL16A1-216ENST00000529928 ASGR2P07307 311 aa18.15■□□□□ 0.5
COL16A1-216ENST00000529928 WEE2P0C1S8 567 aa18.15■□□□□ 0.5
COL16A1-216ENST00000529928 CDC27P30260 824 aa18.15■□□□□ 0.5
COL16A1-216ENST00000529928 CLCN5P51795 746 aa18.15■□□□□ 0.5
COL16A1-216ENST00000529928 POLGP54098 1239 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms